mRNA_H-paniculata_contig1789.4292.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: D8LRT0_ECTSI (Kelch motif family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT0_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 4.220e-166 Identity = 219/279 (78.49%), Postives = 239/279 (85.66%), Query Frame = 1
Query: 178 MTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWGVGGLQRQETNKRAGAVTVAAYRMPACNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLELS 1014
MTWQEVRCGG+LP RYGHSCHLVGSRMF++GGKG +GQLYRDVHFLDLVDW WVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNG+N CY DLWVFDTDSFAW+QPRT GL PT RYGH M+LLPDGRIL+SGG T+DEKC+P YHKDLRQLDTETMLWSKAKTTG RI+S RCNHTLTSDE +AALLFGGWG+GGLQ E NKRAGAVT+AA M A+S +P GRG PEHKYGHTCVSVG+AFFVFGGWNGQQA +++ V EL
Sbjct: 1 MTWQEVRCGGDLPDARYGHSCHLVGSRMFIVGGKGRSGQLYRDVHFLDLVDWTWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGSNHCYEDLWVFDTDSFAWMQPRTGGLPPTARYGHAMVLLPDGRILLSGGATIDEKCVPVYHKDLRQLDTETMLWSKAKTTGG----IRISS-RCNHTLTSDEEGRAALLFGGWGLGGLQHHENNKRAGAVTLAACSMLPHEAVSTNLPLLRGRGEPEHKYGHTCVSVGNAFFVFGGWNGQQACNEIVVFELE 274
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A7S4D7S8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7S8_HETAK) HSP 1 Score: 394 bits (1012), Expect = 5.630e-134 Identity = 192/339 (56.64%), Postives = 226/339 (66.67%), Query Frame = 1
Query: 25 QASTNGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQL-----YRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEK----CIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWGVGGLQRQETNKRAGAVTVAAYRMPACNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLELS 1014
+ + G R+ RGGH+ ++AD+QL+VFGGT Y G G+F YL DT VLD+E+MTWQ VRCGG LP+PRYGH+C LVGSRMFV+GGKG +RDVH LDLVDW+WV +NATSTGPSPRF AS VG KIVVHGGW+G C GDLWVFDTDSFAW+QPR GL P+ RYGHT+ LLPDGR+L GG + P Y +DLRQLDTETM WSK G SGR HT T + S A +FGGWG+GGLQ + TN R GA +V A + N VP R PEH+YG TC VGS VFGGWNGQQA+ D+ +E
Sbjct: 18 KVTPQGYRLTPRGGHSAVVADYQLIVFGGTSYDGGGKFSYLNDTCVLDVETMTWQLVRCGGNLPAPRYGHACELVGSRMFVLGGKGXXXXXXXXGCFRDVHALDLVDWVWVPINATSTGPSPRFNAASAAVGRKIVVHGGWDGEAACLGDLWVFDTDSFAWVQPRVGGLPPSPRYGHTLTLLPDGRLLALGGAAVPAPGAGAVAPQYLEDLRQLDTETMAWSKPARAGEKL------SGRFGHTTTLLD-SSALFIFGGWGLGGLQEKATNNRDGAHSVCAIGIEG-NEARYAVPALRSRKAPEHRYGQTCTRVGSMLLVFGGWNGQQALSDLIAIETQ 348
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A836CGB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB4_9STRA) HSP 1 Score: 360 bits (925), Expect = 3.730e-120 Identity = 175/356 (49.16%), Postives = 229/356 (64.33%), Query Frame = 1
Query: 22 AQASTNGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGG-TLDEKCIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLT------SDEGSQ--------------AALLFGGWGVGGLQRQE----TNKRAGAVTVAAYRMPACNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLELS 1014
AQ TNG RIPARGGH+C+ AD QLVVFGG +Y+G +F+YL D W++D E ++WQ V+C G P PRY H C LVGSRMFVIGGKG +L+RDV FLDL+ W W V+ T+ GP+ RF AS LVG KIVVHGGWNG++ CYGDLWVF+T+SF+W+QP+T G+ P R+GH ++L+PDGR+L GG T ++ +P Y DLRQLDTETM WSK +T G + +GR HTLT +EG Q + +L+GGWG+GGLQ T K++ + P + + VP G G ++GHTC VGS FVFGGW+ QQA+ D+ +++
Sbjct: 14 AQTQTNGVRIPARGGHSCVSADMQLVVFGGHYYEGAHKFEYLNDVWLVDAEKLSWQPVQCSGTPPEPRYSHCCQLVGSRMFVIGGKGRGSKLFRDVWFLDLLSWTWYPVHPTTIGPTARFGHASTLVGRKIVVHGGWNGSDTCYGDLWVFNTESFSWLQPKTGGIAPCARFGHQLVLVPDGRLLCFGGASTSAQQPVPEYQSDLRQLDTETMAWSKPRTQGL------VPAGRYGHTLTLLQHQQGEEGGQXXXXXXXXXXGGGVSLVLYGGWGMGGLQAASVKGGTAKKSSVAVMDVAEEP--QLVDVEVPATVG-GEVVSRHGHTCCVVGSTVFVFGGWDAQQALSDLLMVQAD 360
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A7S1UIK9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIK9_9STRA) HSP 1 Score: 358 bits (918), Expect = 6.590e-120 Identity = 175/331 (52.87%), Postives = 221/331 (66.77%), Query Frame = 1
Query: 37 NGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWGVGGLQ-RQETNKRAGAVTVAAYRMPACNAISICVPFW-----GGRGTPEHKYGHTCVSVGSAFFVF-GGWNGQQAVDDVFVLE 1008
NG+ PARGGH+ +LA+ QLVVFGG +YKG+ F+Y D +VLD+ES+TWQ V C GE+P PRYGHS LVGSRMFV+GGKG G+L+RD++FLDL+DW WV VNAT+ GP+PRF A++LVG KIV+HGGW+G +C GD WVFDT +F WIQPR +GL P+ R+GHT+ LLPDGRI+ GG +D +P Y+ D RQLD E M WSK +++G + S R HT +LFGGWG GG Q +E NKR GAVT + I W GGR +H YGHTC ++ VF GGWNG +AV D+ V+E
Sbjct: 21 NGQIPPARGGHSAVLAESQLVVFGGHYYKGDSAFEYSNDVYVLDVESLTWQRVTCSGEVPEPRYGHSAVLVGSRMFVMGGKGSQGRLFRDMYFLDLIDWKWVPVNATTAGPTPRFEHATLLVGRKIVLHGGWDGNTRCMGDTWVFDTATFTWIQPRISGLPPSPRHGHTLNLLPDGRIVCFGGAGVDNMGVPLYYDDFRQLDPEKMQWSKVRSSGM------LPSARMGHTCVLL--GNRLVLFGGWGYGGCQCPEEGNKRQGAVTALVF--------DIAKGKWSTTEHGGRPA-QHTYGHTCDTIAGTTMVFYGGWNGHEAVSDLVVME 334
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A6G0XGZ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGZ5_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.400e-86 Identity = 148/358 (41.34%), Postives = 202/358 (56.42%), Query Frame = 1
Query: 31 STNGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPS--YHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWG-----------------VGGLQRQETNKRAGAVTVAAYRMPA----------CNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLELSD 1017
S +G ARGGHT +LA +LV+FGG ++ G+G F YL DT LD+E+ TW +V+C G+ P+PRY HS LVG++MFV GGKG G L+RD+H+LDL W W +V T+ PS RF A V VG KIV+ GGW+G+++ + DLWVFDT+SFAWI+P+ G P R GH M LL DGRIL+ GG L S Y D+ LDTETM+WS+ +TTG F + G HT+ +D S + GGW L R+++ + V+ +++ C + P G ++YGHTC VG F+FGGW+G +A+ + V L D
Sbjct: 18 SMDGLPPSARGGHTMLLAGQRLVLFGGHYFGGDGAFVYLNDTHALDLETSTWCQVKCQGKPPAPRYNHSATLVGNKMFVFGGKGGKGTLFRDMHYLDLESWHWYSVTWTTESPSERFGHADVAVGTKIVISGGWDGSSKTFKDLWVFDTESFAWIKPKVTGTPPPPRQGHKMALLDDGRILVFGGYALKASGDLSGEYFNDVYALDTETMIWSRPRTTGD----FPL--GTFGHTICAD--SFKVYVVGGWSGTERSPITMGDKVVNETAKALAREQSLRSGDNVSAKSFKAELSKSKYLHVLDCATMEWSCPRSQGLAV-ANRYGHTCALVGPHLFLFGGWDGNRALHQLVVAALPD 366
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A024U1N5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U1N5_9STRA) HSP 1 Score: 268 bits (685), Expect = 1.040e-84 Identity = 146/338 (43.20%), Postives = 205/338 (60.65%), Query Frame = 1
Query: 76 ILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWG--------VGGLQRQETNK--------RAGA-VTVAAYRMPACNAISI----CVPF-WG---GRGTP-EHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLEL 1011
+LA ++VVFGG ++ G G F YL DT VLD+E+ TW +V+C G+ P+PRY H+ L+G++MFV GGKG LYRD+ +LDL W W +VN T+ PS RF A + VG+K+V+ GGW+GTN+ + DLWVFDT+SFAWI+P+ G PT R+GHTM+LL DGRIL+ GG +D Y D+ LDTETM+W++ +TTG F + G HT T +G + ++ GGW +G QET K ++G+ V+V ++ + + CV W G G P ++YGHTC VG F+FGGW+G +A+ + V L
Sbjct: 2 LLAGQRIVVFGGHYFGGEGTFVYLNDTHVLDLETSTWCQVKCEGKAPAPRYNHTATLIGTKMFVFGGKGAKDALYRDMFYLDLETWHWFSVNWTTESPSERFGHADLAVGNKLVIFGGWDGTNKTFKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMVLLEDGRILVFGG-YVDTH----YFNDVYTLDTETMVWTRPRTTGD----FPV--GTFGHTATVVDGCKLYVV-GGWSGTERSPIYLGDKALQETAKALAREQRLQSGSDVSVKTFKADLAKSKYVHVFDCVAMEWSSPLGTGVPVPNRYGHTCTVVGPHLFMFGGWDGNRALHQLVVAGL 327
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A1V9YGE9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGE9_9STRA) HSP 1 Score: 265 bits (677), Expect = 5.730e-83 Identity = 140/340 (41.18%), Postives = 197/340 (57.94%), Query Frame = 1
Query: 58 RGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPS----YHKDLRQLDTETMLWSKAKTTG----ATCQLFRITSGRCNHTLTSDEGSQAALLFGG-----WGVGGLQRQETNKRAGAVTVAAYRM-----PACNAISICVPFWG---GRGTP-EHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLEL 1011
RGGHT +LA QLV+FGG ++ G F YL + WVLD+E+ W +V+C G+ P+PRY H+ LVG++MFV GGKG G+ YRD+H+LDL W W VN T+ P+ RF A + VG K+V GGW+G N+ Y DLWVFDT++FAWIQP+ AG PT RYGHTM LL DGRI++ GG ++ K +P Y D+ LDTETM W++ + TG T I GR + + G++ + +F G L R+E + YR +A+ + W G ++YGH VG+ F FGGW+G ++++++ V +L
Sbjct: 29 RGGHTMLLAGQQLVLFGGHYFGGESGFVYLNEVWVLDLETSAWCQVKCEGKPPAPRYNHTATLVGAKMFVFGGKGDKGKAYRDMHYLDLETWHWFVVNWTTDSPTERFGHADLAVGTKLVYFGGWDGQNKTYKDLWVFDTETFAWIQPKVAGTPPTARYGHTMGLLDDGRIVLYGGQSV--KMLPQVGVEYFNDVYMLDTETMAWTRPRITGDQPVPTFGHRMIIDGRTVYVVGGWSGTERSPIFMGDKALRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHALDVDGMVWTQPISEGCQVSNRYGHGAAVVGAHVFFFGGWDGNRSMNELVVADL 366
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A067BWJ1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWJ1_SAPPC) HSP 1 Score: 261 bits (667), Expect = 2.190e-81 Identity = 136/348 (39.08%), Postives = 198/348 (56.90%), Query Frame = 1
Query: 37 NGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKCIPS----YHKDLRQLDTETMLWSKAKTTG----ATCQLFRITSGRCNHTLTSDEGSQAALLFGG-----WGVGGLQRQETNKRAGAVTVAAYRMPA----------CNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLEL 1011
+G ARGGH+ +LA QLV+FGG ++ G F YL + WVLD+E+ W +V+C G+ P+PRY HS LVG++MFV GGKG G++YRD+H+LDL W W VN T+ P R + + VG K+V GGW+G N+ + DLWVFDT++FAW+QP AG PT RYGH+M LL DGRI++ GG ++ K +P Y DL LDTETM W + + TG T GR + + G++ + ++ G L R+E + YR C+++ P G ++YGH+ VG+ F+FGGW+G ++++++ V +L
Sbjct: 29 DGSPPTARGGHSMLLAGQQLVLFGGHYFGGEAGFVYLNEVWVLDLETSAWSQVKCEGKPPAPRYSHSATLVGAKMFVFGGKGDKGKIYRDMHYLDLETWHWYVVNWTTESPPERLGHSDLAVGTKLVFFGGWDGQNKTFKDLWVFDTETFAWLQPHVAGTPPTARYGHSMALLDDGRIVLYGGQSV--KTVPEVRVEYFNDLYTLDTETMAWMRPRVTGDQPIPTFSHTMTMVGRTLYIVGGWSGTERSPIYMGDKAMRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHAIDCDSMVWSQPISEGCHV-TNRYGHSAAVVGTHLFLFGGWDGNRSMNELVVADL 373
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: A0A485L7W0_9STRA (Aste57867_17468 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7W0_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.720e-80 Identity = 144/386 (37.31%), Postives = 205/386 (53.11%), Query Frame = 1
Query: 10 VVPSAQASTNGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGG----------------------WNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEK----CIPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWG-----------------VGGLQRQETNKRAGAVTVAAYRMPACNA-----ISICVPFW---GGRGTP-EHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLEL 1011
VV + +G ARGGH+ +LA +LV+FGG ++ G G F YL DT+VLD+ S TW +V+C G+ P+PRY HS L+G++MFV GGKG G L+RD+++LDL W W +VN T+ PS RF A + VG K+V+ GG W+G+++ Y DLWVFDT+SFAWI+P+ G PT R+GHTM LL DGRIL+ GG L YHKD+ LDTETM W++ +T G F + G HT + D Q + GGW L R++ + V+ +++ + + + W +G ++YGHT VG F+FGGW+G +A+ + V +
Sbjct: 17 VVTWSMPGMDGLPPSARGGHSTLLAGQRLVIFGGHYFGGEGFFVYLNDTYVLDLASSTWCQVKCEGKPPAPRYNHSATLIGNKMFVFGGKGDKGVLFRDMYYLDLESWHWFSVNWTTESPSERFGHADLAVGTKLVIFGGYSPLNPSDSTSDSVSDSNGQRRWDGSSKTYKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMSLLEDGRILVFGGYMLQTSGGGDISGEYHKDVYTLDTETMAWTRPRTMGD----FPL--GTFGHTTSLD--GQKLYVVGGWSGTERSQIYMGDKLVHETAKSLAREQRLQSGSTVSAKSFKAELATSKYLHVLDVATMEWYCPPSQGIEVANRYGHTATIVGPHLFLFGGWDGNRALHQLVVADF 394
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Match: F0YHJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ5_AURAN) HSP 1 Score: 255 bits (651), Expect = 1.340e-79 Identity = 137/331 (41.39%), Postives = 181/331 (54.68%), Query Frame = 1
Query: 37 NGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGDTWVLDIESMTWQEVRCGGELPSPRYGHSCHLVGSRMFVIGGKGPNGQLYRDVHFLDLVDWIWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGTNQCYGDLWVFDTDSFAWIQPRTAGLCPTERYGHTMMLLPDGRILMSGGGTLDEKC-IPSYHKDLRQLDTETMLWSKAKTTGATCQLFRITSGRCNHTLTSDEGSQAALLFGGWGVGGLQRQETNKRAGAVTVAAYRMPA----CNAISICVPFWGGRGTPEHKYGHTCVSVGSAFFVFGGWNGQQAVDDVFVLELS 1014
+G+R ARGGHT +A+ Q+V+FGG+ Y G F Y DT+VLD E+ W +V+C G+ P PRYGHS LVGSRMFV GG+G +G L R GW+G C GDLWVF++D+F W+QP++AG+ P+ RYGHT+ LL DGRIL GG + K +P Y+ DLRQLDTETM+W+K G +C S R H + A LFGGWG+GGLQ K+ GA + ++ + N +P P HKYGHT +VG ++FGGWNG+QA D+ L+ S
Sbjct: 10 DGDRPSARGGHTATMAENQIVIFGGSCYTTGGNFAYYNDTYVLDTENRLWHKVQCSGDAPPPRYGHSVELVGSRMFVFGGRGESGAL-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWDGRTHCMGDLWVFNSDTFTWVQPKSAGILPSPRYGHTLDLLSDGRILCYGGCNVSLKDPVPEYYNDLRQLDTETMIWTKPAI-GGSCP----PSKRYGHATAHMDFGLA--LFGGWGIGGLQNMGC-KQKGAGSFYFLKVTSDGTGSNTNEWILPH-APATLPMHKYGHTMTTVGGTLYIFGGWNGKQATSDLIELQFS 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1789.4292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1789.4292.1 >prot_H-paniculata_contig1789.4292.1 ID=prot_H-paniculata_contig1789.4292.1|Name=mRNA_H-paniculata_contig1789.4292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp SRTVVPSAQASTNGERIPARGGHTCILADFQLVVFGGTFYKGNGEFKYLGback to top mRNA from alignment at H-paniculata_contig1789:5966..8793+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1789.4292.1 ID=mRNA_H-paniculata_contig1789.4292.1|Name=mRNA_H-paniculata_contig1789.4292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2828bp|location=Sequence derived from alignment at H-paniculata_contig1789:5966..8793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1789:5966..8793+ >mRNA_H-paniculata_contig1789.4292.1 ID=mRNA_H-paniculata_contig1789.4292.1|Name=mRNA_H-paniculata_contig1789.4292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig1789:5966..8793+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |