prot_H-paniculata_contig17875.4284.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17875.4284.1
Unique Nameprot_H-paniculata_contig17875.4284.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length193
Homology
[Close]
BLAST of mRNA_H-paniculata_contig17875.4284.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 6.090e-67
Identity = 132/199 (66.33%), Postives = 152/199 (76.38%), Query Frame = 0 
Query:   10 GLVPPRPTRSKPLSAYSLTTRRPPVASCGVEEARKIVERARKHVAVAALENYSAERKGEGLEDD-----------------DKGEGRREGEVMATAAAAEGIRALIRATWEDVKEWCDEEAEARVRRKDSQVRDRLLAVERHREALIAALRDGAGGSAASTTPGRLEFAARFRPMAAEAVLAECKAVHTKRVGTLYLTC 191
            GL PPRPTRSKPLSAY LTTRRPPV++CGVEEAR+++ERAR+HV      +    +KG  ++D+                 D+G G +   V + ++ AEGIR+LIRATWEDVKEWCDEEAEARVRRKD+QVRDRLLAVE HREALIAALRDGAGGSAAS+TP   EFAARFRPMA EAVL +CKAVH KRVG LYLTC
Sbjct:  539 GLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGG--DSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAK---VGSGSSVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTC 732
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17875.4284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI6.090e-6766.33GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17875contigH-paniculata_contig17875:1868..4502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17875.4284.1mRNA_H-paniculata_contig17875.4284.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17875 1868..4502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17875.4284.1 ID=prot_H-paniculata_contig17875.4284.1|Name=mRNA_H-paniculata_contig17875.4284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
TLPPPPEKSGLVPPRPTRSKPLSAYSLTTRRPPVASCGVEEARKIVERAR
KHVAVAALENYSAERKGEGLEDDDKGEGRREGEVMATAAAAEGIRALIRA
TWEDVKEWCDEEAEARVRRKDSQVRDRLLAVERHREALIAALRDGAGGSA
ASTTPGRLEFAARFRPMAAEAVLAECKAVHTKRVGTLYLTCK*
back to top