mRNA_H-paniculata_contig17874.4283.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A6H5K278_9PHAE (Hemerythrin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K278_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.220e-21 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 1
Query: 25 QTRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
+T+FLKTW WAMPERAQ +GLMVYRVVDDVTWV++A DLPE+VPRGLPG+ R +
Sbjct: 494 RTKFLKTWVWAMPERAQLVGLMVYRVVDDVTWVQLAYDLPEIVPRGLPGYSRSF 547
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: D7G375_ECTSI (Glutaredoxin glutaredoxin/malate transporter fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G375_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 1.320e-21 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 1
Query: 25 QTRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
+T+FLKTW WAMPERAQ +GLMVYRVVDDVTWV++A DLPE+VPRGLPG+ R +
Sbjct: 875 RTKFLKTWVWAMPERAQLVGLMVYRVVDDVTWVQLAYDLPEIVPRGLPGYSRSF 928
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A835YQQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ0_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.160e-15 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 25 QTRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
+ R ++ WAMPERAQ +GLM+YR +DD TWV V+ D+PE+VPRGLPG +Y+
Sbjct: 127 KVRCVRALCWAMPERAQLIGLMLYRGLDDATWVSVSADVPEIVPRGLPGWRQYF 180
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A482SNB2_9ARCH (DUF4395 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNB2_9ARCH) HSP 1 Score: 76.3 bits (186), Expect = 1.050e-14 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 25 QTRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
+ RF+K WA P RAQ++GLM+Y VD VTW+ VAR++PE+VPRG+ GHHR Y
Sbjct: 815 KARFVKCLVWANPTRAQEIGLMLYPNVDSVTWLFVAREVPEIVPRGVTGHHRIY 868
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A1Z5JPM1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPM1_FISSO) HSP 1 Score: 70.5 bits (171), Expect = 1.140e-12 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 7 NLICHHQ-TRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
NL H Q R+LK W++ ERAQQ+G ++YR D V W + R++PE++PRG+PG RYY
Sbjct: 891 NLPRHEQRVRYLKVLTWSLQERAQQIGAILYRHTDAVMWERLTREVPEIIPRGVPGWRRYY 951
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A5J4Z806_PORPP (S-type anion channel SLAH3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z806_PORPP) HSP 1 Score: 68.9 bits (167), Expect = 3.970e-12 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 7 NLICHHQ-TRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
L H Q RF K + WAMP RAQQ+G M+YR VDDV W + + PE+VPRG PG R++
Sbjct: 955 GLPLHGQRVRFTKCFTWAMPYRAQQIGNMLYRKVDDVMWERLVAECPELVPRGAPGWRRFW 1015
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A7S2I7X6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I7X6_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.590e-11 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 7 NLICHHQ-TRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
NL H Q R+LK AW+MPERAQQ+G +VYR VD V W + ++PE++PRG RYY
Sbjct: 934 NLPRHMQRVRYLKVLAWSMPERAQQIGAIVYRNVDAVMWERLRVEVPEIIPRGGYNWRRYY 994
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A482RIJ3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RIJ3_9ARCH) HSP 1 Score: 65.5 bits (158), Expect = 2.820e-11 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 31 RFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRY 183
R L+ WAMPER QQ+GL + R VD V W ++ RD+P ++PRG+PG +Y
Sbjct: 188 RMLRALQWAMPERTQQIGLYIVRDVDAVMWADLTRDMPALIPRGMPGWSQY 238
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A7S1YR59_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR59_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 9.030e-11 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 7 NLICHHQ-TRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRYY 186
NL H Q R+L+ W+MPERAQQ+G +VYR VD V W + ++PE++PRG RYY
Sbjct: 926 NLPRHMQRVRYLQVLCWSMPERAQQIGAIVYRNVDAVMWERLRVEIPEIIPRGAYNWRRYY 986
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Match: A0A7S3DS84_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS84_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 4.950e-10 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 31 RFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVVPRGLPGHHRY 183
RFLK+ W+MPERAQQ+G +VYR VD V W + ++PE++PRG RY
Sbjct: 272 RFLKSMCWSMPERAQQIGAIVYRNVDAVMWKRLDIEIPEMIPRGESNWRRY 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17874.4283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17874.4283.1 >prot_H-paniculata_contig17874.4283.1 ID=prot_H-paniculata_contig17874.4283.1|Name=mRNA_H-paniculata_contig17874.4283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp WTNLICHHQTRFLKTWAWAMPERAQQLGLMVYRVVDDVTWVEVARDLPEVback to top mRNA from alignment at H-paniculata_contig17874:4936..5124- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17874.4283.1 ID=mRNA_H-paniculata_contig17874.4283.1|Name=mRNA_H-paniculata_contig17874.4283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at H-paniculata_contig17874:4936..5124- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17874:4936..5124- >mRNA_H-paniculata_contig17874.4283.1 ID=mRNA_H-paniculata_contig17874.4283.1|Name=mRNA_H-paniculata_contig17874.4283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig17874:4936..5124- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |