prot_H-paniculata_contig17861.4278.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17861.4278.1
Unique Nameprot_H-paniculata_contig17861.4278.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length206
Homology
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BLAST of mRNA_H-paniculata_contig17861.4278.1 vs. uniprot
Match: D7G6K1_ECTSI (CRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K1_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.470e-11
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0 
Query:  128 VHQGNAIGAKA--EFGLSDGILEELWRRPRKHFFSIGKSGLKPSHLRSLRELVQAHTLVKVKYLEARFEVRRDGLWMSS 204
            ++ G  + A A  EF L++  +EELW R +K   S+GK G+KPSH+RSL  L+ AHTLVKVK      ++   GL ++ 
Sbjct:    1 MNAGGEVSAAAVPEFDLAEKTVEELWMRVKKQLISVGKGGIKPSHVRSLNSLIAAHTLVKVKVNIPNADLEEVGLELAG 79
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BLAST of mRNA_H-paniculata_contig17861.4278.1 vs. uniprot
Match: A0A6H5JP08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP08_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.550e-10
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:  139 EFGLSDGILEELWRRPRKHFFSIGKSGLKPSHLRSLRELVQAHTLVKVKYLEARFEVRRDGL 200
            EF L++  +EELW R +K   S+GK G+KPSH+RSL  L+ AHTLVKVK      ++   GL
Sbjct:   91 EFDLAEKTVEELWMRVKKQLISVGKGGIKPSHVRSLNSLIAAHTLVKVKVNIPNADLEEVGL 152
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BLAST of mRNA_H-paniculata_contig17861.4278.1 vs. uniprot
Match: A0A835YHR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHR7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.140e-8
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:  141 GLSDGILEELWRRPRKHFFSIGKSGLKPSHLRSLRELVQAHTLVKVK 187
            GLS+  +EELWR+P+K    IG+ G+  SH+RSL +LVQ HT+V+VK
Sbjct:   59 GLSEATIEELWRKPKKELLKIGQGGVTASHVRSLTDLVQHHTIVRVK 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17861.4278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6K1_ECTSI1.470e-1143.04CRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JP08_9PHAE3.550e-1050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHR7_9STRA1.140e-855.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.689
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 155..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17861contigH-paniculata_contig17861:203..2545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17861.4278.1mRNA_H-paniculata_contig17861.4278.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17861 8..2623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17861.4278.1 ID=prot_H-paniculata_contig17861.4278.1|Name=mRNA_H-paniculata_contig17861.4278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
MRCMPLTLAFFATASAVPDTCPSFILTPSHRTTPSLCFLSWCTTTSSMLR
RVSDPYAPTTLPRSNNLPDRAWSPWLRKTSAIQREYSQGLRAQRTLCLQQ
RRELFASYRRYRSVGVSCIAQDIERENVHQGNAIGAKAEFGLSDGILEEL
WRRPRKHFFSIGKSGLKPSHLRSLRELVQAHTLVKVKYLEARFEVRRDGL
WMSSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035920YhbY-like_sf