prot_H-paniculata_contig17850.4274.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17850.4274.1
Unique Nameprot_H-paniculata_contig17850.4274.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: D7FHP2_ECTSI (40S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP2_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 3.200e-41
Identity = 94/134 (70.15%), Postives = 101/134 (75.37%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVG-AAPTPMEGFQPAAPVDPTA---VPMDSYQAPPAADALGGGWDAAPGG---QEVVVDQAPQEAQLVEQVMPVDAGVPAAA 127
            MRGTIDR V WDVPVDLFFYREPEELEKAEEAQAPFQEPAA AA GWGA+PM G AAPTPMEGF   A VDP A   VP++ YQAPP A A+GGGWDAAP     Q + V+Q     Q V + MPVDAGVP AA
Sbjct:  187 MRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQAPFQEPAAAAASGWGADPMAGGAAPTPMEGF---AAVDPAAAAPVPVE-YQAPPQAAAMGGGWDAAPATGAEQGMPVEQV----QPVAEAMPVDAGVPPAA 312          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A7S4DAK2_HETAK (40S ribosomal protein SA n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAK2_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 6.000e-11
Identity = 43/83 (51.81%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVGAAPTPMEGFQPAAPVDPTAVPMDSYQAPP 83
            MRGTI R  PWDVPVDLFFYR+PEELEKA+EAQA   E    A  GWGA P   A    M      AP          ++APP
Sbjct:  211 MRGTISRDAPWDVPVDLFFYRDPEELEKADEAQAAAYEEQVPA--GWGAAPEAAAPAAEMAPMDYVAPDAXXXXAAAGFEAPP 291          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A7D9F077_PARCT (40S ribosomal SA n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9F077_PARCT)

HSP 1 Score: 63.2 bits (152), Expect = 1.160e-9
Identity = 33/57 (57.89%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQA----PFQEPAAVAAPGWGAEPMV 53
            MRGTI R +PWDV VDL+FYR+P E EK E   A    PFQ PA V +  WGA P V
Sbjct:   12 MRGTISRDIPWDVMVDLYFYRDPAEAEKEETTPAIEETPFQAPATVTSTDWGAAPSV 68          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A8J2SYU6_9STRA (40S ribosomal protein SA n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYU6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.530e-9
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQA 34
            MRGT+ R  PWDVPVDLFFYR+PEELEKAEEAQA
Sbjct:  256 MRGTVSRLAPWDVPVDLFFYRDPEELEKAEEAQA 289          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A7S2UMV7_9STRA (40S ribosomal protein SA n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMV7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.040e-9
Identity = 45/96 (46.88%), Postives = 54/96 (56.25%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVGAAPTPMEGFQPAAPVDPTAVPMDSYQAPPAADALGGGWDAAP 96
            +RGT  RAV WDVPVDLFF+R+PEEL+K EE QA   + AA   P + A   V  AP  +EG    A  D  A P   +      DA  GG+DA P
Sbjct:  195 LRGTASRAVDWDVPVDLFFHRDPEELKKNEEEQAAAVQVAAAPTPVYDATEEVPVAPGLIEGV---AASDVVAAPATGF------DATAGGFDAVP 281          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A836CJ71_9STRA (40S ribosomal protein SA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ71_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.350e-9
Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVGAA 56
            +RGT+ R  PWDVPVDLFF+REPEELEK E  Q  F+EPAA  A GW A   +GAA
Sbjct:  187 LRGTVPRDAPWDVPVDLFFHREPEELEKTEAEQ--FEEPAAPTA-GWDATAGMGAA 239          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: F0Y9V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V2_AURAN)

HSP 1 Score: 63.2 bits (152), Expect = 3.890e-9
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQA 34
            MRGT+ R  PWDVPVDLFFYR+PEELEKA+EAQA
Sbjct:  179 MRGTVARHAPWDVPVDLFFYRDPEELEKADEAQA 212          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A0P1B4R0_PLAHL (40S ribosomal protein SA n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4R0_PLAHL)

HSP 1 Score: 63.5 bits (153), Expect = 5.260e-9
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVGAAPTPME 61
            +RGTI RA+PWDV VDLF YR+PEEL+KAEEAQA      + A PGWG      A+P+P+E
Sbjct:  182 LRGTISRALPWDVAVDLFLYRDPEELKKAEEAQA-IAGDESQARPGWG-----DASPSPVE 236          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: K3WLH6_GLOUD (40S ribosomal protein SA n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLH6_GLOUD)

HSP 1 Score: 63.2 bits (152), Expect = 8.260e-9
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAEPMVGAAP 57
            +RGTI RA+PWDV VDLF YR+PEEL+KAEEAQ+   + A VA  GWG    V A P
Sbjct:  206 LRGTISRALPWDVAVDLFLYRDPEELKKAEEAQSGAADEA-VARAGWGETAEVAAEP 261          
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Match: A0A7S1TQF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQF9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.110e-8
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    2 RGTIDRAVPWDVPVDLFFYREPEELEKAEEAQA 34
            RG+I RA PW  PVDLFFYR+PEELEKAEEAQA
Sbjct:    5 RGSISRAEPWSTPVDLFFYRDPEELEKAEEAQA 37          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17850.4274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP2_ECTSI3.200e-4170.1540S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4DAK2_HETAK6.000e-1151.8140S ribosomal protein SA n=2 Tax=Heterosigma akash... [more]
A0A7D9F077_PARCT1.160e-957.8940S ribosomal SA n=1 Tax=Paramuricea clavata TaxID... [more]
A0A8J2SYU6_9STRA1.530e-985.2940S ribosomal protein SA n=1 Tax=Pelagomonas calce... [more]
A0A7S2UMV7_9STRA3.040e-946.8840S ribosomal protein SA n=1 Tax=Attheya septentri... [more]
A0A836CJ71_9STRA3.350e-964.2940S ribosomal protein SA n=1 Tax=Tribonema minus T... [more]
F0Y9V2_AURAN3.890e-982.35Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A0P1B4R0_PLAHL5.260e-959.0240S ribosomal protein SA n=1 Tax=Plasmopara halste... [more]
K3WLH6_GLOUD8.260e-961.4040S ribosomal protein SA n=1 Tax=Globisporangium u... [more]
A0A7S1TQF9_9STRA1.110e-881.82Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10490coord: 1..35
e-value: 3.8E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17850contigH-paniculata_contig17850:1709..3281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17850.4274.1mRNA_H-paniculata_contig17850.4274.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17850 836..4321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17850.4274.1 ID=prot_H-paniculata_contig17850.4274.1|Name=mRNA_H-paniculata_contig17850.4274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
MRGTIDRAVPWDVPVDLFFYREPEELEKAEEAQAPFQEPAAVAAPGWGAE
PMVGAAPTPMEGFQPAAPVDPTAVPMDSYQAPPAADALGGGWDAAPGGQE
VVVDQAPQEAQLVEQVMPVDAGVPAAAGGGWDAAPQAAAPAAQSGGWGDA
PAQGNGGW*
back to top