prot_H-paniculata_contig17836.4268.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17836.4268.1
Unique Nameprot_H-paniculata_contig17836.4268.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
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BLAST of mRNA_H-paniculata_contig17836.4268.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 9.720e-19
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0 
Query:    1 TIAADAVAALVNVSAEDNTSGVALEDMCKAGIVNRMMEAVSAEECSPRVRDLSLKLLANVTRVQV 65
            TI  DAV+ LVNVSAE+ TS  ALEDMCKAGIVNRMMEAVS E+C P +RDL L+LLANVTRVQV
Sbjct:  113 TIGKDAVSCLVNVSAEE-TSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQV 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17836.4268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1I7_ECTSI9.720e-1976.92Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17836contigH-paniculata_contig17836:415..2158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17836.4268.1mRNA_H-paniculata_contig17836.4268.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17836 415..2158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17836.4268.1 ID=prot_H-paniculata_contig17836.4268.1|Name=mRNA_H-paniculata_contig17836.4268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
TIAADAVAALVNVSAEDNTSGVALEDMCKAGIVNRMMEAVSAEECSPRVR
DLSLKLLANVTRVQV
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