prot_H-paniculata_contig17818.4261.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17818.4261.1
Unique Nameprot_H-paniculata_contig17818.4261.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
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BLAST of mRNA_H-paniculata_contig17818.4261.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.380e-20
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 0 
Query:   15 AAHPHCI--DKPTYAEGELTFCPAAQDGVCCNDLEEAVVVERFNGAGPLTPECADYYKQVVCAECGSFSGHLFERL 88
            A+HP C   D+PT  +  L FCP AQ G CC D EEA+V  R    G LT +C D YKQVVC  CGS+SGHL+ERL
Sbjct:   23 ASHPLCYVDDRPTDPDEILEFCPEAQSGACCTDAEEALVQLRHEAVGNLTGDCDDLYKQVVCGVCGSYSGHLYERL 98
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BLAST of mRNA_H-paniculata_contig17818.4261.1 vs. uniprot
Match: UPI0018D629DF (HHIP-like protein 2 isoform X2 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D629DF)

HSP 1 Score: 52.8 bits (125), Expect = 5.370e-6
Identity = 28/83 (33.73%), Postives = 41/83 (49.40%), Query Frame = 0 
Query:   16 AHPHCIDK----PTYAEGELTFCPAAQDGVCCN---DLE-----EAVVVERFNGAGPLTPECADYYKQVVCAECGSFSGHLFE 86
            AHP C+D         E +  FC    +  CC    DLE     E +V E     GPLT +C ++ K+++C EC  ++ HLF+
Sbjct:   32 AHPQCLDFFAPFDHNQEQQPEFCTLYDEFGCCTKEMDLEIRQNFEDIVAEYKGIHGPLTTDCLNFLKEILCQECSPYAAHLFD 114
[Close]
BLAST of mRNA_H-paniculata_contig17818.4261.1 vs. uniprot
Match: UPI0018D60067 (HHIP-like protein 2 isoform X1 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D60067)

HSP 1 Score: 52.8 bits (125), Expect = 5.380e-6
Identity = 28/83 (33.73%), Postives = 41/83 (49.40%), Query Frame = 0 
Query:   16 AHPHCIDK----PTYAEGELTFCPAAQDGVCCN---DLE-----EAVVVERFNGAGPLTPECADYYKQVVCAECGSFSGHLFE 86
            AHP C+D         E +  FC    +  CC    DLE     E +V E     GPLT +C ++ K+++C EC  ++ HLF+
Sbjct:   32 AHPQCLDFFAPFDHNQEQQPEFCTLYDEFGCCTKEMDLEIRQNFEDIVAEYKGIHGPLTTDCLNFLKEILCQECSPYAAHLFD 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17818.4261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6T7_ECTSI2.380e-2056.58WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI0018D629DF5.370e-633.73HHIP-like protein 2 isoform X2 n=2 Tax=Patiria min... [more]
UPI0018D600675.380e-633.73HHIP-like protein 2 isoform X1 n=1 Tax=Patiria min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.696

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17818contigH-paniculata_contig17818:3346..3914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17818.4261.1mRNA_H-paniculata_contig17818.4261.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17818 3222..3914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17818.4261.1 ID=prot_H-paniculata_contig17818.4261.1|Name=mRNA_H-paniculata_contig17818.4261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MRTSFLLVCGVGWAAAHPHCIDKPTYAEGELTFCPAAQDGVCCNDLEEAV
VVERFNGAGPLTPECADYYKQVVCAECGSFSGHLFERL
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