prot_H-paniculata_contig178.4254.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig178.4254.1
Unique Name	prot_H-paniculata_contig178.4254.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	236

Homology

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: D7G430_ECTSI (Plastid thioredoxin M n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G430_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.470e-45
Identity = 85/140 (60.71%), Postives = 99/140 (70.71%), Query Frame = 0

Query:   35 ASSGGRRPRTTETQALQRASIATYPPGIASNTAMLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVRYFLQG 174
            A +G R PRTT   AL        P    S+T + A ATY +FEDMLEKEPG LLVDFYATWCGPC  M + L  VGPKMK E+KI KIDTDKYP L  KF V GLPTL+LFK+GKEL R+EG +P + L+Q++RYFL G
Sbjct:   44 AKTGPRSPRTT---ALSYVCGGERP----SSTRLFAKATYKNFEDMLEKEPGALLVDFYATWCGPCSMMSDNLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAEMLIQELRYFLGG 176

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A6H5JZH9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH9_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 8.170e-41
Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   35 ASSGGRRPRTTETQALQRASIATYPPGIASNTAMLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVRYFL 172
            A +G R PRTT +  +     +   PG    T++ A ATY +FEDML KEPG LLVDFYATWCGPC  M E L  VGPKMK E+KI KIDTDKYP L  KF V GLPTL+LFK+GKEL R+EG +P + L+QQ+RYFL
Sbjct:  677 AKTGPRSPRTTASSYV----CSGERPG---TTSLFAKATYKNFEDMLAKEPGALLVDFYATWCGPCSMMSENLAVVGPKMKDELKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMPAEMLIQQLRYFL 807

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A2W7A323_9CYAN (Thioredoxin n=8 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2W7A323_9CYAN)

HSP 1 Score: 121 bits (304), Expect = 7.550e-32
Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLL 165
            M     + SFED+L    GP+LVDFYATWCGPCQ M   L  V  ++KG++KI+KIDTDKYP +  ++ +A LPTL+LFK G+ + RIEG LP DQL+
Sbjct:    1 MAVKQQFQSFEDLLAGASGPVLVDFYATWCGPCQMMASILTTVSSQLKGQLKIVKIDTDKYPQIASQYRIAALPTLVLFKSGQPIDRIEGVLPADQLV 98

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A8J7E5E3_9CYAN (Thioredoxin n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7E5E3_9CYAN)

HSP 1 Score: 120 bits (302), Expect = 1.510e-31
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 0

Query:   74 YTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVR 169
            + SFED+L     P+LVDFYATWCGPCQ M   L  V  ++KGE+KI+KIDTDKYP +  ++ VA LPTL+LFK GK + RIEG LP +QL+ ++R
Sbjct:    7 FQSFEDLLAGAETPVLVDFYATWCGPCQMMASILATVSRRLKGELKIVKIDTDKYPQIASQYQVAALPTLVLFKAGKPIDRIEGVLPAEQLVTRLR 102

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: UPI00093545F8 (thioredoxin n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00093545F8)

HSP 1 Score: 120 bits (301), Expect = 2.200e-31
Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQ 166
            M     +TSFED+L +   P+LVDFYATWCGPCQ M   L+EVG +MK +++I+KIDTDKYP L  ++ +  LPTL+LFK G+  +RIEG + G QL+Q
Sbjct:    1 MAVKKQFTSFEDLLTQATKPVLVDFYATWCGPCQMMAPLLEEVGYQMKDQIQIVKIDTDKYPQLASRYGIHALPTLVLFKNGQPAERIEGLMQGPQLVQ 99

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A0D6R1X1_ARACU (Thioredoxin domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R1X1_ARACU)

HSP 1 Score: 122 bits (306), Expect = 3.160e-31
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 0

Query:   38 GGRRPRTTETQALQRASIATYPPGIAS---NTAMLATA-TYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVRYFLQGAE 176
            GGRR    ++    R S+ T  P I+    N  + AT  T++SF++ML+K   P+LVDFYATWCGPCQ M   L++VG ++K +++++KIDT+KYP++  ++ V  LPT ILF+ G+   R EG LP DQL+ ++   LQGA+
Sbjct:   41 GGRR----QSSVTLRYSVKTCRPKISRRYLNLRVQATKQTFSSFDEMLKKSEQPVLVDFYATWCGPCQYMVPILEDVGRRLKDKIRVVKIDTEKYPSIASRYDVQALPTFILFRNGQPFDRFEGALPADQLVSRIEKILQGAK 179

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: K9UR76_CHAP6 (Thioredoxin n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UR76_CHAP6)

HSP 1 Score: 119 bits (298), Expect = 5.840e-31
Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVRYFL 172
            M     +TSFED +     P+LVDFYATWCGPCQ M + L++V  ++ G+V+IMKIDTDKYP +   + +  LPTL+LFK G+ + R+EG LP +QL+ ++  FL
Sbjct:    1 MAVKQQFTSFEDAIANSDLPILVDFYATWCGPCQMMAKILEQVNIELNGQVRIMKIDTDKYPQIASNYQIQALPTLVLFKGGQSVDRLEGVLPAEQLIDRIGQFL 105

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: UPI000EFA9703 (thioredoxin n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI000EFA9703)

HSP 1 Score: 119 bits (297), Expect = 8.750e-31
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVR 169
            M     + SF++M+     PLLVDFYA WCGPCQ M + L +VG +MKGEVK++KIDT+KYPA+  +  +  LPTL+LFK+G+ + RIEG L  DQL+ +VR
Sbjct:    1 MAVKQQFNSFDEMISGSDQPLLVDFYADWCGPCQMMAKILVQVGAEMKGEVKVVKIDTEKYPAIASQHQIHALPTLVLFKQGQPVDRIEGVLTADQLVARVR 102

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A7Y3X5Z7_9FLAO (Thioredoxin n=1 Tax=Flavobacterium sp. CLA17 TaxID=2724135 RepID=A0A7Y3X5Z7_9FLAO)

HSP 1 Score: 118 bits (296), Expect = 1.170e-30
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVR 169
            M     +TSF++M+     P+LVDFYATWCGPCQ M + L+EV   MK ++KI+KIDTDKYP +  +  +  LPTL+LFK+G+ ++RIEG LP DQL+Q+++
Sbjct:    1 MTTKKEFTSFDEMIAGSELPVLVDFYATWCGPCQMMAKILEEVNAHMKEQIKIVKIDTDKYPHIASQHQIHALPTLVLFKQGQPVERIEGVLPADQLVQRLQ 102

[Close]

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Match: A0A2T1C185_9CYAN (Thioredoxin n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C185_9CYAN)

HSP 1 Score: 118 bits (295), Expect = 1.650e-30
Identity = 48/105 (45.71%), Postives = 76/105 (72.38%), Query Frame = 0

Query:   68 MLATATYTSFEDMLEKEPGPLLVDFYATWCGPCQQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGKELQRIEGFLPGDQLLQQVRYFL 172
            M     +TSFE+++     P+LVDFYATWCGPC  M + L+E+   +K  +K++K+DTDKYP ++ ++ +A LPTL+LFK G+ + +IEG LP +QL+Q+++ +L
Sbjct:    1 MAVKKQFTSFEEVISSSEQPVLVDFYATWCGPCHMMAKILEEINGYLKSRIKVVKVDTDKYPVISSQYGIAALPTLVLFKNGQPVDKIEGVLPPEQLIQRLQSYL 105

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig178.4254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G430_ECTSI	3.470e-45	60.71	Plastid thioredoxin M n=1 Tax=Ectocarpus siliculos...	[more]
A0A6H5JZH9_9PHAE	8.170e-41	60.14	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A2W7A323_9CYAN	7.550e-32	55.10	Thioredoxin n=8 Tax=Cyanobacteria/Melainabacteria ...	[more]
A0A8J7E5E3_9CYAN	1.510e-31	57.29	Thioredoxin n=1 Tax=Nodosilinea sp. LEGE 07088 Tax...	[more]
UPI00093545F8	2.200e-31	54.55	thioredoxin n=1 Tax=Spirulina major TaxID=270636 R...	[more]
A0A0D6R1X1_ARACU	3.160e-31	44.76	Thioredoxin domain-containing protein n=2 Tax=Arau...	[more]
K9UR76_CHAP6	5.840e-31	49.52	Thioredoxin n=2 Tax=Chamaesiphon TaxID=217161 RepI...	[more]
UPI000EFA9703	8.750e-31	52.94	thioredoxin n=1 Tax=Leptolyngbya sp. BC1307 TaxID=...	[more]
A0A7Y3X5Z7_9FLAO	1.170e-30	51.96	Thioredoxin n=1 Tax=Flavobacterium sp. CLA17 TaxID...	[more]
A0A2T1C185_9CYAN	1.650e-30	45.71	Thioredoxin n=1 Tax=Merismopedia glauca CCAP 1448/...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 136..147 score: 42.08 coord: 96..105 score: 46.67 coord: 88..96 score: 58.4
None	No IPR available	GENE3D	3.40.30.10		coord: 62..172 e-value: 5.5E-29 score: 102.3
None	No IPR available	PANTHER	PTHR45663	FAMILY NOT NAMED	coord: 71..172
None	No IPR available	PANTHER	PTHR45663:SF15	THIOREDOXIN Y1, CHLOROPLASTIC-RELATED	coord: 71..172
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..235
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.525
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 71..168 e-value: 9.8E-26 score: 89.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 47..173 score: 13.534
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 89..107
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 72..175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig178	contig	H-paniculata_contig178:2455..5750 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig178.4254.1	mRNA_H-paniculata_contig178.4254.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig178 1461..5799 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig178.4254.1 ID=prot_H-paniculata_contig178.4254.1|Name=mRNA_H-paniculata_contig178.4254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MKVTRRLVILSAAYLVNRAAGFVTTITRNAGGNAASSGGRRPRTTETQAL
QRASIATYPPGIASNTAMLATATYTSFEDMLEKEPGPLLVDFYATWCGPC
QQMGETLKEVGPKMKGEVKIMKIDTDKYPALTEKFAVAGLPTLILFKKGK
ELQRIEGFLPGDQLLQQVRYFLQGAEVAEGAATSAQQASACPPQPPQDAC
APPVAAAEQDACAPAPKDACSPPPRDSCAPPAPQS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS
IPR036249	Thioredoxin-like_sf