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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2927 |
| Cds size | 1752 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1779.4251.1 >prot_H-paniculata_contig1779.4251.1 ID=prot_H-paniculata_contig1779.4251.1|Name=mRNA_H-paniculata_contig1779.4251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp
MNAKPVVGTAGPPCANNGTYGLDGHYIAKRQKIDTATGRDPDTPSVRSCM
VASVSSAQGQPERMSFVPWSERVRPGEPVDSRRMAELEAEVVRLKEMIRE
CEDREARIEQEAIDETRIPLIVAIEKLESQNETLHKRLAMFEQKEITEAN
RQQSLQNTKKRHVEELHSSVLLKLDLLEESESQVTRLTNALAQAESESRA
AIAALTESEAAKENLETEVKVAQVAAADECRRAVAADEALAVMQEKLADS
KAVKEKLENELQAAQAAATEESRRAVAADEALADLEEKLAACGAERVVLE
KELSDARGTVHEKEQEGVIELTILSSRLSSGSYISSSSAGASSQSPSTNR
RSARPLPQCKPAAASSQQAPPSPPVNPGKGLAKQPKISKLPPLFTSKPAA
YVSATAHASRQSPSFRAVNMGKGQADQMKEKGKGVSDTENIPSSPTGAGR
GKSPPSSDRSPAKAKSVVTNFSSADSPQWAPSPVASLCRPTRTANHGHGR
TIRRPLADVTKQTDEPSGQGEIMNEQKKRKREELRTANSAAERERKKRLV
GRLPMAEARGTRGANLRRSKRLVSRGQCGSIPR* back to topmRNA from alignment at H-paniculata_contig1779:9780..14081- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1779.4251.1 ID=mRNA_H-paniculata_contig1779.4251.1|Name=mRNA_H-paniculata_contig1779.4251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4302bp|location=Sequence derived from alignment at H-paniculata_contig1779:9780..14081- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTTGGACAACGCAATATTGTCCATGAATGCGAAGCCGGTCGTGGGAACA
GCCGGACCGCCTTGTGCGAACAACGGAACCTACGGCCTTGATGGCCACTA
CATCGCAAAGCGGCAGAAGATAGATACTGCTACTGGTCGCGACCCCGACA
CCCCGTCTGTCCGTTCCTGCATGGTAGCCTCTGTTAGTAGTGCGCAAGGG
CAGCCGGAACGGATGTCGTTCGTGCCCTGGAGCGAGCGAGTGCGGCCTGG
CGAGCCGGTAGATTCAAGGAGGATGGCCGAGTTGGAGGCCGAGGTGGTGA
GGTTGAAAGAAATGATCAGAGAGTGCGAAGACCGGGAGGCTCGGATAGAG
CAGGAGGCGATCGACGAAACGCGAATCCCGCTGATTGTCGCCATTGAGAA
GCTCGAGGTGAGACAGGATCGTCAGATGTGCGTTTCCGTGATGGTCGAGT
GGACGATTCGGTAATTTGGTTCTTTTCATATAAGTTGTCTAGTAGCGGTA
TAAAAGGACCGTTGTGCGAAAACTTCTTGGGTCATCGAGTGTTACCTGCT
TCTTTCGTAGCAGGCGGAAGCTTCGAGTAATGCCACGCAATGACCTGTTG
GTGGCATAGCTCTACCGGGATGGTACGCCCACTTATTCGCACCCATATTT
CATGAGACACGAGTGAGGACATCGTGAAATCTAACTCGTGTTTTCCCCTC
GCATGCTCAGCAAAATGGAAGGTCTGCACGCTAGGCCTTGGTGGCAATCG
ATATTTCCTCACATGTGTTGCATATATTTTTGGCCTTGGAGGTCATGGTA
CAGAATGCGCACGTTCCCAACCAATACGAAGTCGTGCCTATACATACATA
CAAACTGTACTCGTTGCCCCACCCTCGTTTCCATCGCTCGTGCATCTCCA
CACAGAGTCAAAACGAAACGCTGCATAAACGGCTCGCAATGTTTGAGCAA
AAAGAAATTACGGAGGCCAACCGGCAGCAGTCGCTCCAAAATACAAAAAA
GCGCCATGTCGAAGAGCTGCACTCCAGCGTGCTGCTGAAGCTGGATTTGC
TTGAAGAGTCGGAGTCTCAGGTGACGCGTCTTACCAATGCCCTTGCCCAA
GCCGAGAGTGAAAGCCGTGCCGCAATAGCAGCGCTCACAGAGAGCGAGGC
AGCGAAGGAAAATCTGGAAACCGAAGTCAAGGTGGCTCAGGTCGCCGCTG
CCGACGAGTGTCGTCGAGCCGTTGCCGCCGACGAAGCCCTTGCCGTGATG
CAGGAGAAGCTCGCCGACAGCAAAGCGGTGAAGGAAAAACTCGAGAACGA
GCTTCAAGCGGCGCAGGCTGCTGCTACCGAAGAGAGTCGACGAGCAGTGG
CCGCTGACGAAGCGCTTGCCGATCTGGAGGAAAAGCTCGCCGCTTGCGGA
GCGGAAAGGGTTGTGCTTGAGAAAGAGTTGAGCGACGCGAGAGGGACTGT
CCACGAGAAGGAGCAAGAGGGAGTTATTGAGTTGACGATACTCTCATCAA
GGCTATCGTCGGGGAGTTACATTTCGTCCAGCTCAGCCGGCGCCAGCTCC
CAGTCGCCGTCCACCAACCGTAGGTCTGCGAGGCCTCTCCCCCAGTGTAA
ACCGGCCGCCGCCAGCTCTCAACAGGCGCCGCCCTCCCCGCCGGTCAATC
CTGGCAAGGGATTGGCAAAGCAGCCGAAGATTAGTAAGTTACCCCCGCCG
TCAACGAGTCTCTTTACATCCAAGCCGGCCGCCTACGTCTCCGCCACCGC
CCATGCCTCTCGACAGTCGCCCTCCTTCCGGGCGGTCAACATGGGCAAAG
GGCAGGCTGACCAGATGAAGGAGAAGGGTAAAGGAGTCTCGGATACCGAG
AACATCCCGTCCAGCCCGACCGGCGCTGGCCGCGGGAAGTCGCCACCCTC
GAGTGACCGTAGCCCCGCGAAGGCGAAAAGCGTTGTGACCAACTTCTCCT
CCGCGGACTCTCCGCAGTGGGCGCCCTCCCCCGTAGCCTCGTTATGCAGG
CCCACGAGGACGGCGAATCATGGTCACGGACGGACGATCAGGCGGCCGCT
GGCGGATGTGACGAAGCAGACGGACGAGCCGAGCGGGCAAGGAGAGATTA
TGAATGAACAGAAGAAGAGGAAGAGAGAGGAGTTGAGGACGGCCAACAGT
GCAGCAGAGAGGGAGAGGTGAGCGAGGTCGTGATGATGATGTGCGGTGAT
TCAGTATGTGGGGTCCCTTTGCGAATCAACCCGTTGCGATGGGCAGTCTG
TGTTAGTCGAGCTGTTTATGGCAAACGTTGCGTAGTGTCTGATTTGCACG
GTTTCCTGGAAAACAAGAATGACGATTTTGTCTGCAAACAACGATACTTA
CCCATTAAGATGCAAAATTTACAACCTGTCGGGGTTGTTGCGCCCATATG
CGAAGCGGCCTTGAAGTTTTACTGGTGTTATAATATATTCCGCAGTAATT
TATCTCCTAATTTTTAGTCCCTTTGTACCCCATGATTCTCTCTTCAGACG
GTATTCTTATCTTCTACATATTGCCCTGCTGGTGAGACGGTTCTCGTCGG
TTGGCGCGTGTGGTGATGTCGCTTTCATGTATTTGGTGGCACACTTGTTG
CTCCTGCATAAAGTGCACTACTGGCTATGTTGTAATTGCTGTTTGTTGTT
GCTATCATGTACAATGTACCCTGTACCCGTATTTTTAATAGTCTCAAGCA
TCCTATGCACACTATGGTCAACCCAAAATCAGTATTCACCTGCATATGAT
AATAGCAGCGGCGGGAGCATGGTCTGAGCGATAGGAGGGAAACACCTGTT
CCGTGTGTAGCACTCCTAGCCAAGCGGACGCCAATATTTGATAAAGGCAC
CGTCCTGCACGCTAGCTACCATGGCAATAATCTGCACTTATGGTTTTGTT
TGTCAAAGTAGAGTGGTAGGCACGAATGAAATTGCCCTTGATGACCTATC
TCAATCTCGAGTTATTCATCTTCCTTTACAATCCAAATCTTCGTTAAATC
CTCTCCCCCCTCCCCCTTGCGTATCGACATAGGAAAAAGAGGCTTGTCGG
CCGCTTACCTATGGCAGAGGCTCGCGGGACAAGGGGCGCCAATCTTCGCC
GCTCCAAACGTCTAGTGTCGCGGGGACAATGCGGATCTATTCCACGGTAA
AGTAGTTCTTCTGGGACCCAGCAATTCTGTGTTGGCGATTTTTATGCGAA
GTCAACGCAAGTCGGTGACAAAATAGTAACCGTGCGTGACGGGGCAGCGA
GAGCAGGCATCGTTCTATGTGGTGTATTCGTCCGAGTCTGAAGCATGATG
GTACGCGCTGCGTGTTTGTCGTTATCCACCGTCTTGAGAACAAAATGTGG
GCGAGTAGAGGGCGATATTTTGAGAGGACAAGCTTTCCCTGCTATGACAT
GTGCAGCTATTTTTTCCATGTATTAGACTGCATGCCCATCGCACAGAGCA
AGCAAGCAGTATAGGGGTAGGGGGCAGGGAGGAGGTATGCGATGCCATTG
ATGAGGCTTTTCATTTGTCGTGTTTGTGAGGCAGAGCGTGGATTTTAGTA
TGACTGTGTCCTTGTGTGTTTGTTGCATGTGTTCGGGATGAGGTGTAACC
AGCTTGGGAAGGGTTGTCGCCCTTTGGTCCGCGAGTGCTTGGTTGACTGC
GGCCAATTGCATTATTTTATCAAGTGCAGGAGAGTTGGACATGCGTGAGG
GGGGCAACTTGTAAAACTTGGGCCTGCCGAGATCAATGTGTAACTGTTGG
GTGTCCTTTATGCTCGCGACAACCGTGGCGATGTTTCTGGCCTCTATATT
CGCGTAGTATCCCTCGTGCCCCGCCGCTGGTGTTGGTGCTCTGTGCTGTA
AGTACGCTGTTGGCGGAGAAGATGGGCGTATGTTTGTGTTATAACGATGG
TATAGAGTTTATATCCATAGCTCTGTGGTTTGTGGGAATTTAGGGTCAAC
CTTACGGAGATAGGGAGAGGGGCGTGTGGTTGGAGCGTAATATATATGTT
AAGAGATGGAAGAATGGCCGGGCCTATTGGTCCTGGCCAAGCAACACACC
ACGGGGCAGGGATCTGGATGTCAATTTAGTCTCCGTGGGAGTACCTTACG
CTTAAGCTTAACCCCACTACGCCTCCATCCCTTACATTATTGGGACTGCA
TAGTTTGTGCTGCCGTGCAAGCCAACATGTATGTATCCCTCATTTGTTGT
CGAGAGAGAGAGACAGTGAGGGCGACCATGATTTCGCTGTTGATCTCGTA
TGGGAATGGAGGCATGTCATGGCATGGCTCTAGTGGGTCGCAGCAATGAG
AC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1779:9780..14081- >mRNA_H-paniculata_contig1779.4251.1 ID=mRNA_H-paniculata_contig1779.4251.1|Name=mRNA_H-paniculata_contig1779.4251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3504bp|location=Sequence derived from alignment at H-paniculata_contig1779:9780..14081- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGCGAAGCCGGTCGTGGGAACAGCCGGACCGCCTTGTGCGAACAA
CGGAACCTACGGCCTTGATGGCCACTACATCGCAAAGCGGCAGAAGATAG
ATACTGCTACTGGTCGCGACCCCGACACCCCGTCTGTCCGTTCCTGCATG
GTAGCCTCTGTTAGTAGTGCGCAAGGGCAGCCGGAACGGATGTCGTTCGT
GCCCTGGAGCGAGCGAGTGCGGCCTGGCGAGCCGGTAGATTCAAGGAGGA
TGGCCGAGTTGGAGGCCGAGGTGGTGAGGTTGAAAGAAATGATCAGAGAG
TGCGAAGACCGGGAGGCTCGGATAGAGCAGGAGGCGATCGACGAAACGCG
AATCCCGCTGATTGTCGCCATTGAGAAGCTCGAGATGAATGCGAAGCCGG
TCGTGGGAACAGCCGGACCGCCTTGTGCGAACAACGGAACCTACGGCCTT
GATGGCCACTACATCGCAAAGCGGCAGAAGATAGATACTGCTACTGGTCG
CGACCCCGACACCCCGTCTGTCCGTTCCTGCATGGTAGCCTCTGTTAGTA
GTGCGCAAGGGCAGCCGGAACGGATGTCGTTCGTGCCCTGGAGCGAGCGA
GTGCGGCCTGGCGAGCCGGTAGATTCAAGGAGGATGGCCGAGTTGGAGGC
CGAGGTGGTGAGGTTGAAAGAAATGATCAGAGAGTGCGAAGACCGGGAGG
CTCGGATAGAGCAGGAGGCGATCGACGAAACGCGAATCCCGCTGATTGTC
GCCATTGAGAAGCTCGAGAGTCAAAACGAAACGCTGCATAAACGGCTCGC
AATGTTTGAGCAAAAAGAAATTACGGAGGCCAACCGGCAGCAGTCGCTCC
AAAATACAAAAAAGCGCCATGTCGAAGAGCTGCACTCCAGCGTGCTGCTG
AAGCTGGATTTGCTTGAAGAGTCGGAGTCTCAGGTGACGCGTCTTACCAA
TGCCCTTGCCCAAGCCGAGAGTGAAAGCCGTGCCGCAATAGCAGCGCTCA
CAGAGAGCGAGGCAGCGAAGGAAAATCTGGAAACCGAAGTCAAGGTGGCT
CAGGTCGCCGCTGCCGACGAGTGTCGTCGAGCCGTTGCCGCCGACGAAGC
CCTTGCCGTGATGCAGGAGAAGCTCGCCGACAGCAAAGCGGTGAAGGAAA
AACTCGAGAACGAGCTTCAAGCGGCGCAGGCTGCTGCTACCGAAGAGAGT
CGACGAGCAGTGGCCGCTGACGAAGCGCTTGCCGATCTGGAGGAAAAGCT
CGCCGCTTGCGGAGCGGAAAGGGTTGTGCTTGAGAAAGAGTTGAGCGACG
CGAGAGGGACTGTCCACGAGAAGGAGCAAGAGGGAGTTATTGAGTTGACG
ATACTCTCATCAAGGCTATCGTCGGGGAGTTACATTTCGTCCAGCTCAGC
CGGCGCCAGCTCCCAGTCGCCGTCCACCAACCGTAGGTCTGCGAGGCCTC
TCCCCCAGTGTAAACCGGCCGCCGCCAGCTCTCAACAGGCGCCGCCCTCC
CCGCCGGTCAATCCTGGCAAGGGATTGGCAAAGCAGCCGAAGATTAGTAA
GTTACCCCCAGTCAAAACGAAACGCTGCATAAACGGCTCGCAATGTTTGA
GCAAAAAGAAATTACGGAGGCCAACCGGCAGCAGTCGCTCCAAAATACAA
AAAAGCGCCATGTCGAAGAGCTGCACTCCAGCGTGCTGCTGAAGCTGGAT
TTGCTTGAAGAGTCGGAGTCTCAGGTGACGCGTCTTACCAATGCCCTTGC
CCAAGCCGAGAGTGAAAGCCGTGCCGCAATAGCAGCGCTCACAGAGAGCG
AGGCAGCGAAGGAAAATCTGGAAACCGAAGTCAAGGTGGCTCAGGTCGCC
GCTGCCGACGAGTGTCGTCGAGCCGTTGCCGCCGACGAAGCCCTTGCCGT
GATGCAGGAGAAGCTCGCCGACAGCAAAGCGGTGAAGGAAAAACTCGAGA
ACGAGCTTCAAGCGGCGCAGGCTGCTGCTACCGAAGAGAGTCGACGAGCA
GTGGCCGCTGACGAAGCGCTTGCCGATCTGGAGGAAAAGCTCGCCGCTTG
CGGAGCGGAAAGGGTTGTGCTTGAGAAAGAGTTGAGCGACGCGAGAGGGA
CTGTCCACGAGAAGGAGCAAGAGGGAGTTATTGAGTTGACGATACTCTCA
TCAAGGCTATCGTCGGGGAGTTACATTTCGTCCAGCTCAGCCGGCGCCAG
CTCCCAGTCGCCGTCCACCAACCGTAGGTCTGCGAGGCCTCTCCCCCAGT
GTAAACCGGCCGCCGCCAGCTCTCAACAGGCGCCGCCCTCCCCGCCGGTC
AATCCTGGCAAGGGATTGGCAAAGCAGCCGAAGATTAGTAAGTTACCCCC
TCTCTTTACATCCAAGCCGGCCGCCTACGTCTCCGCCACCGCCCATGCCT
CTCGACAGTCGCCCTCCTTCCGGGCGGTCAACATGGGCAAAGGGCAGGCT
GACCAGATGAAGGAGAAGGGTAAAGGAGTCTCGGATACCGAGAACATCCC
GTCCAGCCCGACCGGCGCTGGCCGCGGGAAGTCGCCACCCTCGAGTGACC
GTAGCCCCGCGAAGGCGAAAAGCGTTGTGACCAACTTCTCCTCCGCGGAC
TCTCCGCAGTGGGCGCCCTCCCCCGTAGCCTCGTTATGCAGGCCCACGAG
GACGGCGAATCATGGTCACGGACGGACGATCAGGCGGCCGCTGGCGGATG
TGACGAAGCAGACGGACGAGCCGAGCGGGCAAGGAGAGATTATGAATGAA
CAGAAGAAGAGGAAGAGAGAGGAGTTGAGGACGGCCAACAGTGCAGCAGA
GAGGGAGAGTCTCTTTACATCCAAGCCGGCCGCCTACGTCTCCGCCACCG
CCCATGCCTCTCGACAGTCGCCCTCCTTCCGGGCGGTCAACATGGGCAAA
GGGCAGGCTGACCAGATGAAGGAGAAGGGTAAAGGAGTCTCGGATACCGA
GAACATCCCGTCCAGCCCGACCGGCGCTGGCCGCGGGAAGTCGCCACCCT
CGAGTGACCGTAGCCCCGCGAAGGCGAAAAGCGTTGTGACCAACTTCTCC
TCCGCGGACTCTCCGCAGTGGGCGCCCTCCCCCGTAGCCTCGTTATGCAG
GCCCACGAGGACGGCGAATCATGGTCACGGACGGACGATCAGGCGGCCGC
TGGCGGATGTGACGAAGCAGACGGACGAGCCGAGCGGGCAAGGAGAGATT
ATGAATGAACAGAAGAAGAGGAAGAGAGAGGAGTTGAGGACGGCCAACAG
TGCAGCAGAGAGGGAGAGGAAAAAGAGGCTTGTCGGCCGCTTACCTATGG
CAGAGGCTCGCGGGACAAGGGGCGCCAATCTTCGCCGCTCCAAACGTCTA
GTGTCGCGGGGACAATGCGGATCTATTCCACGGTAAGAAAAAGAGGCTTG
TCGGCCGCTTACCTATGGCAGAGGCTCGCGGGACAAGGGGCGCCAATCTT
CGCCGCTCCAAACGTCTAGTGTCGCGGGGACAATGCGGATCTATTCCACG
GTAA back to top
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