prot_H-paniculata_contig17785.4250.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17785.4250.1
Unique Nameprot_H-paniculata_contig17785.4250.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A6H5L014_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L014_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 6.220e-120
Identity = 170/194 (87.63%), Postives = 181/194 (93.30%), Query Frame = 0
Query:    1 MKVSSVVCLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            MKVS VVC +AAAGAANAFVAP+A RL  V RG+SSL MA K   KKEEWV+VLKTSDIAPGELVGVTQDG E+L+AADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLG+LEPPKDLAVFPVRASGGNIQVLINRNLK EFE+KYW+G+LDAQGKA+GDYY
Sbjct:    1 MKVSGVVCFMAAAGAANAFVAPSATRLGAVTRGESSLNMAVKKPSKKEEWVSVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPPKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A836CB65_9STRA (Ferredoxin component n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB65_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.440e-97
Identity = 146/192 (76.04%), Postives = 162/192 (84.38%), Query Frame = 0
Query:    3 VSSVVCLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            VS+   +  AA  A AFVAP   RL   VR  SS++M AK   K EEWV+VL+TS+IAPGELV V  DGL++L+AADL GSIYATANICPHLGTPLDQGSINA GALVCPLHKSAFSLE G+LVGDWCPFPP+LGPLVLGKLEPPK+LAVFPVRA G NI+VL+NRNLK +FETKYWSGILDAQGKATGDYY
Sbjct:    8 VSTAAVVALAASGAEAFVAPAGGRL-AGVRSSSSMRMMAKVPAK-EEWVSVLQTSEIAPGELVPVETDGLQLLIAADLDGSIYATANICPHLGTPLDQGSINAQGALVCPLHKSAFSLETGELVGDWCPFPPILGPLVLGKLEPPKNLAVFPVRAKGSNIEVLVNRNLKADFETKYWSGILDAQGKATGDYY 197          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A6V1TRG8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TRG8_HETAK)

HSP 1 Score: 263 bits (673), Expect = 3.370e-87
Identity = 130/189 (68.78%), Postives = 152/189 (80.42%), Query Frame = 0
Query:    6 VVCLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            VVC++A  G A AFV  +     + V+  SSLQM AK  G KEEWV VLKT +IAPGELV V  DGL++L+ AD  GSIYA+ANICPHLGTPLDQGS+   G +VCPLHKSAFSLE G+L GDWCPFPP+LGPLVLGKLEPPK+LAV PVRA G +I+VL+NRNLK  FE+KYW+G+LDA+GKATGDYY
Sbjct:    7 VVCVIALIGLAKAFVPASNGLARSAVKSTSSLQMMAKV-GAKEEWVPVLKTDEIAPGELVPVETDGLQLLIIADFDGSIYASANICPHLGTPLDQGSLGD-GTIVCPLHKSAFSLETGELAGDWCPFPPILGPLVLGKLEPPKNLAVVPVRAKGNSIEVLVNRNLKSMFESKYWAGLLDAKGKATGDYY 193          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A7S2V0A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0A4_9STRA)

HSP 1 Score: 240 bits (613), Expect = 4.840e-78
Identity = 128/196 (65.31%), Postives = 148/196 (75.51%), Query Frame = 0
Query:    1 MKVSSVVCLVAAAGAANAFVAPTAPRLNTVVRGQSS-LQMAAKTKGK-KEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            MK   VV L  AAG  NAF+       ++ VR  SS L+M        KEEW+ VLK S+IA GELV V QDGL++LV AD  GSIY TANICPHLGTP+DQGS+   G +VCPLHKSAFSLE G+L GDWCPFPP+LGPLVLGKLEP K+LA F VRA G +I+VL+NRNLK +FE+KYW+GILDAQGKATGDYY
Sbjct:    2 MKTFVVVLLCIAAGV-NAFLPAPGMAGSSAVRATSSQLKMGGVPFAPTKEEWIPVLKKSEIAAGELVPVEQDGLQLLVIADFDGSIYCTANICPHLGTPMDQGSLGD-GTIVCPLHKSAFSLETGELAGDWCPFPPLLGPLVLGKLEPAKNLATFAVRAKGDSIEVLVNRNLKQQFESKYWAGILDAQGKATGDYY 195          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A4D9CV78_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV78_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.030e-77
Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = 0
Query:    1 MKVSSVV-CLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKG--KKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            MKV++++  L A   A   F A   PR+  V  G+ +   + + KG   K+EWV++LK +DIAPG+++ V   GL++L+ AD  GS+Y  ANICPHLGTPLDQGS+   G +VCPLHKSAFSLE G+LVGDWCPFPPVLGPLVLGKL+PP+DLAVF VR+ G +I+ L+N NLK +FE+KYW+G+LDAQGKATGDYY
Sbjct:    1 MKVAAILLALCATTQAFVPFAAKPTPRVAPVAAGKQNPDGSIRVKGVKAKDEWVSLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANICPHLGTPLDQGSLGD-GTIVCPLHKSAFSLETGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALVNVNLKADFESKYWAGLLDAQGKATGDYY 196          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A6U4IM54_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IM54_9STRA)

HSP 1 Score: 238 bits (606), Expect = 8.350e-77
Identity = 116/194 (59.79%), Postives = 145/194 (74.74%), Query Frame = 0
Query:    1 MKVSSVVCLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            M +  V+  + AA  + AFVA   P      R  S+L M A  + K E WV VLKTS+I  GELV V  DG+ +L+AAD  G+IY  AN+CPHLGTPLDQG++ A G +VCPLHK+AFSL+ G++VGDWCPFPP+LGP+VLGKLEP K++A FPVR+SG NIQV +N+N + EFE+ YW+GILDAQGKATGDYY
Sbjct:   16 MMMKFVLAALLAAVPSMAFVAKAGPSAARATRASSALNMMAGARAKME-WVTVLKTSNIGKGELVPVETDGMNLLIAADTNGAIYCLANVCPHLGTPLDQGTV-ANGVIVCPLHKTAFSLKSGEVVGDWCPFPPILGPMVLGKLEPAKNVATFPVRSSGSNIQVQVNKNARAEFESGYWAGILDAQGKATGDYY 207          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A6U4JWG8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JWG8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 7.470e-75
Identity = 110/175 (62.86%), Postives = 135/175 (77.14%), Query Frame = 0
Query:   20 VAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            VA   P      R  S+L M A  + K E WV VLKTS+I  GELV V  DG+ +L+AAD  G+IY  AN+CPHLGTPLDQG++ A G +VCPLHK+AFSL+ G++VGDWCPFPP+LGP+VLGKLEP K++A FPVR+SG NIQV +N+N + EFE+ YW+GILDAQGKATGDYY
Sbjct:   44 VAKAGPSAARATRASSALNMMAGARAKME-WVTVLKTSNIGKGELVPVETDGMNLLIAADTNGAIYCLANVCPHLGTPLDQGTV-ANGVIVCPLHKTAFSLKSGEVVGDWCPFPPILGPMVLGKLEPAKNVATFPVRSSGSNIQVQVNKNARAEFESGYWAGILDAQGKATGDYY 216          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A7S0XBI6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI6_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.530e-72
Identity = 110/177 (62.15%), Postives = 132/177 (74.58%), Query Frame = 0
Query:   18 AFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            AFV P+ PR  +  R  S LQM  K   KKEEWV VLK+SDIA G+LV V  DG+ IL+ ADL G I+A  N CPHLGTPL+ G +     +VCPLHKSAFSLE G +VGDWCPFPP+LGPLVLGKL PP+ +  FPVRA G  ++V ++R+LK  FE+KYWSG+LDAQGKATG+YY
Sbjct:   18 AFV-PSMPRAISSGRLNSQLQM--KVISKKEEWVPVLKSSDIAAGDLVPVEVDGVAILIVADLDGKIFAIGNSCPHLGTPLENGRLGEGSTIVCPLHKSAFSLESGDVVGDWCPFPPILGPLVLGKLAPPEKVVTFPVRAKGQTVEVFVDRSLKERFESKYWSGLLDAQGKATGEYY 191          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A0G4F0C4_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0C4_VITBC)

HSP 1 Score: 189 bits (481), Expect = 1.250e-57
Identity = 86/147 (58.50%), Postives = 110/147 (74.83%), Query Frame = 0
Query:   48 EEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            +EW AVL   +IA G+LV V  +GL +L+ AD  GSIY  AN+CPH+GTPL+QG +   G +VCPLH++AFSLE G++VGDWCPFPP++GPL  GKL PP++LA FPVR  G  I+VL++ + K  FE  YW G+LDAQGKA G YY
Sbjct:   78 QEWKAVLNDDEIAAGDLVPVQVNGLNLLLVADADGSIYCVANVCPHIGTPLEQGEVKD-GKVVCPLHRTAFSLESGEVVGDWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSSAKANFEKNYWKGLLDAQGKADGSYY 222          
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Match: A0A0G4ER02_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ER02_VITBC)

HSP 1 Score: 189 bits (480), Expect = 1.770e-57
Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = 0
Query:   48 EEWVAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDLAVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY 194
            +EW AVL   +IA G+LV V  +GL +L+ AD  GSIY  AN+CPH+GTPL+QG +   G ++CPLH++AFSLE G++VG+WCPFPP++GPL  GKL PP++LA FPVR  G  I+VL++ N K  FE  YW G+LDAQGKA G YY
Sbjct:   78 QEWKAVLNDDEIAAGDLVPVQVNGLNLLLVADTDGSIYCVANVCPHIGTPLEQGEVKD-GKVICPLHRTAFSLEKGEVVGEWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSNTKANFEKNYWKGLLDAQGKADGSYY 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17785.4250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L014_9PHAE6.220e-12087.63Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A836CB65_9STRA2.440e-9776.04Ferredoxin component n=2 Tax=Tribonema minus TaxID... [more]
A0A6V1TRG8_HETAK3.370e-8768.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V0A4_9STRA4.840e-7865.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CV78_9STRA2.030e-7759.39Rieske domain-containing protein n=2 Tax=Monodopsi... [more]
A0A6U4IM54_9STRA8.350e-7759.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4JWG8_9STRA7.470e-7562.86Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S0XBI6_9STRA2.530e-7262.15Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A0G4F0C4_VITBC1.250e-5758.50Rieske domain-containing protein n=1 Tax=Vitrella ... [more]
A0A0G4ER02_VITBC1.770e-5757.82Rieske domain-containing protein n=1 Tax=Vitrella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 49..128
e-value: 7.0E-17
score: 61.2
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 51..164
score: 25.427
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 46..173
e-value: 8.2E-21
score: 76.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 47..169
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 30..168
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 30..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17785contigH-paniculata_contig17785:985..3348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17785.4250.1mRNA_H-paniculata_contig17785.4250.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17785 774..4362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17785.4250.1 ID=prot_H-paniculata_contig17785.4250.1|Name=mRNA_H-paniculata_contig17785.4250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MKVSSVVCLVAAAGAANAFVAPTAPRLNTVVRGQSSLQMAAKTKGKKEEW
VAVLKTSDIAPGELVGVTQDGLEILVAADLKGSIYATANICPHLGTPLDQ
GSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGKLEPPKDL
AVFPVRASGGNIQVLINRNLKGEFETKYWSGILDAQGKATGDYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf