prot_H-paniculata_contig17782.4249.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17782.4249.1
Unique Nameprot_H-paniculata_contig17782.4249.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: D7G6K8_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K8_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 3.460e-23
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQA 58
            MTH+GYLKLFQL  PCLG+  YDVIMLDEAQ  NPCIASIVLRET+CARILVGDSHQA
Sbjct:  855 MTHAGYLKLFQLSRPCLGRT-YDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQA 911          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A7S4TAX2_9DINO (DNA helicase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX2_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQA 58
            MTH GYLKL+ L  P L    YDV++LDEAQ CNP IA IV+ ++ CAR+LVGD HQA
Sbjct:  527 MTHGGYLKLYSLSKPKLA---YDVVLLDEAQDCNPAIADIVMSQS-CARLLVGDKHQA 580          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A3P8ZMJ0_ESOLU (DNA helicase n=6 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZMJ0_ESOLU)

HSP 1 Score: 72.8 bits (177), Expect = 1.410e-13
Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQ 57
            MTH GYLKL+QLQ PCL Q  YDVI +DEAQ C P I  I+L +  C +ILVGD HQ
Sbjct:  597 MTHDGYLKLWQLQRPCLDQ--YDVIFIDEAQDCTPAIMDIMLHQ-HCGKILVGDPHQ 650          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A4RTQ9_OSTLU (DNA helicase n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RTQ9_OSTLU)

HSP 1 Score: 72.4 bits (176), Expect = 1.930e-13
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCL--------GQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQ 57
            +TH+GY+KL+QLQ P L         + GYDVI+LDEAQ   P +  IVLR+T+CA+ILVGD HQ
Sbjct:  570 LTHAGYMKLYQLQRPRLDIDMSRNKNKTGYDVILLDEAQDIAPVMFDIVLRQTKCAKILVGDVHQ 634          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A813FWF8_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FWF8_POLGL)

HSP 1 Score: 72.0 bits (175), Expect = 2.620e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQA 58
            MTH GYLKL+ L  P L    YD+++LDEAQ CNP IAS+V  ++ CARILVGD HQA
Sbjct:  205 MTHGGYLKLYSLSKPRLK---YDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQA 258          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A813DDB3_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DDB3_POLGL)

HSP 1 Score: 72.0 bits (175), Expect = 2.630e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQA 58
            MTH GYLKL+ L  P L    YD+++LDEAQ CNP IAS+V  ++ CARILVGD HQA
Sbjct:  384 MTHGGYLKLYSLSKPRLK---YDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQA 437          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A813J487_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J487_POLGL)

HSP 1 Score: 72.0 bits (175), Expect = 2.640e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQA 58
            MTH GYLKL+ L  P L    YD+++LDEAQ CNP IAS+V  ++ CARILVGD HQA
Sbjct:  805 MTHGGYLKLYSLSKPRLK---YDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQA 858          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A3B3QY71_9TELE (DNA helicase n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QY71_9TELE)

HSP 1 Score: 70.5 bits (171), Expect = 9.190e-13
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQ 57
            MTH GYLKL+QLQ PCL +  YDVI +DEAQ C+P I  I++ + +C ++LVGD HQ
Sbjct:  619 MTHDGYLKLWQLQKPCLDK--YDVIFIDEAQDCSPVILDIMMSQ-RCGKVLVGDPHQ 672          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A6I9P370_9TELE (DNA helicase n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9P370_9TELE)

HSP 1 Score: 70.1 bits (170), Expect = 1.260e-12
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQ 57
            MTH GYLKL+QLQ PCL    YDV+ +DEAQ C P I  ++L + +C +ILVGD HQ
Sbjct:  620 MTHDGYLKLWQLQRPCLSDQ-YDVLFIDEAQDCTPAIMDVLLSQ-RCGKILVGDPHQ 674          
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Match: A0A673AY96_9TELE (DNA helicase n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AY96_9TELE)

HSP 1 Score: 69.3 bits (168), Expect = 2.340e-12
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARILVGDSHQ 57
            MTH GYLKL+QLQ PCL    YD I +DEAQ C P +  I+L + +C +ILVGD HQ
Sbjct:  518 MTHDGYLKLWQLQKPCLSNQ-YDAIFIDEAQDCTPVVLDILLSQ-RCGKILVGDPHQ 572          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17782.4249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K8_ECTSI3.460e-2384.48DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S4TAX2_9DINO1.030e-1362.07DNA helicase n=1 Tax=Alexandrium monilatum TaxID=3... [more]
A0A3P8ZMJ0_ESOLU1.410e-1363.16DNA helicase n=6 Tax=Esox lucius TaxID=8010 RepID=... [more]
A4RTQ9_OSTLU1.930e-1355.38DNA helicase n=2 Tax=Ostreococcus sp. 'lucimarinus... [more]
A0A813FWF8_POLGL2.620e-1362.07DNA helicase n=1 Tax=Polarella glacialis TaxID=899... [more]
A0A813DDB3_POLGL2.630e-1362.07DNA helicase n=1 Tax=Polarella glacialis TaxID=899... [more]
A0A813J487_POLGL2.640e-1362.07DNA helicase n=1 Tax=Polarella glacialis TaxID=899... [more]
A0A3B3QY71_9TELE9.190e-1357.89DNA helicase n=2 Tax=Paramormyrops kingsleyae TaxI... [more]
A0A6I9P370_9TELE1.260e-1257.89DNA helicase n=4 Tax=Notothenioidei TaxID=8205 Rep... [more]
A0A673AY96_9TELE2.340e-1257.89DNA helicase n=2 Tax=Sphaeramia orbicularis TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 5..58
e-value: 2.6E-5
score: 26.0
NoneNo IPR availablePANTHERPTHR11070:SF30F-BOX DNA HELICASE 1coord: 5..57
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 5..57
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17782contigH-paniculata_contig17782:4287..4460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17782.4249.1mRNA_H-paniculata_contig17782.4249.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17782 4287..4484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17782.4249.1 ID=prot_H-paniculata_contig17782.4249.1|Name=mRNA_H-paniculata_contig17782.4249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MTHSGYLKLFQLQSPCLGQAGYDVIMLDEAQGCNPCIASIVLRETQCARI
LVGDSHQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000212DNA_helicase_UvrD/REP
IPR027417P-loop_NTPase