prot_H-paniculata_contig17747.4237.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17747.4237.1
Unique Nameprot_H-paniculata_contig17747.4237.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length556
Homology
BLAST of mRNA_H-paniculata_contig17747.4237.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.150e-88
Identity = 274/580 (47.24%), Postives = 330/580 (56.90%), Query Frame = 0
Query:    1 RILREVERIPALRRLSDSALRVTSATDADGRLAALALYRLGSAARAAE------YASSAPVTVPGTISAPASEVA---DSTXXXXXXXXXAPVNSHP----------GTVTERCVSSVISERWDAGEASGKGVVGTAAAGGAPRSPVLSEERSETSTSGIAELDGVSSERKPGEMEMMVVDGNKTNRGDDNDDHDHNGNDGVARASAEEVEHSSTVVAGAV---AVGQVSPTAAAGSPMEAASDAAVSVATVATASFDVEEVTSDQRFEQLVEIVECTAARMSVSDVSKVVWGLSILGHVPRNSLLETLAELITDRLKDEYKHTVPAAVAPSSPXXXXXXXXXXXXXXXXXXTAVTASRVPGTTMSGTEGRSSAAASPQSSGAX--AGVGSSEGTXXXXXXMQGAASSARARLGFSDIAVNHDADGV-QATVGVGDV---GGTAATSGTDLATAALAFAYAHARLGIFTGDLLEIIAACTAPKLISMPLRDLANLAWAYAAQRRLDEELMLGIAREITSSRAAGGAMSAKDASVFAWSYGMLGLRPRRVVRTLMREGLATIGEATPHDMSNLAWGLARAG 552
            +ILRE ERIPALRRLSDSALRVTSAT +DGRLAALALYRLG+AARAAE       AS+A   V G+++A     A     T    XXXXX      P              ER  ++  S    +   +      TA  GG P     + E+ +  T G A   G+         E+  V G+                   A A+ E V+     +AG+V   + G        G+P  AAS  +       TA+FD+EEV SDQRFEQLVEI+EC +  +SVSD SKVVWGLSILGHVPRNSLLE+LA  +TDRL+ E      AA A    XXXXXXXXXXXXXXXXXX         G  ++   G     +SP SS +    G+GS  G         G  S                A+ V +AT G          A TSGTDLATAAL+FAYAHARL I TG+LLE+IAAC  P+L +MPLRDLANL+WA+A Q RL  E+M G+ REI SSRA+G  M+AKDAS+ AW+YGMLGLRP RV+  L REGLAT+ EATPHD+SNLAWGLA+AG
Sbjct:  103 KILREAERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGSVAADGERSAVGPSKTGGEGXXXXXXXXXERPERXXXXXXXXXXXXERPAAATESGDQSSTTPTATLSAATARQGGEP----FNNEQGQAGT-GAATGTGI---------EVPGVKGDTPEE---------------AGAAGESVKTKDPALAGSVPRSSEGGGGVEEEVGTPAAAASVGSSPNKGATTAAFDMEEVRSDQRFEQLVEIIECVSKDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQE------AATAAXXXXXXXXXXXXXXXXXXXXXXXEGEGGANGQKVTVAGGAEDGISSPSSSDSPQEGGLGSGSGKPAEGHD-DGQLSGIEGGNXXXXXXXXXXAEAVDKATTGAASPKKRDAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQHRLHPEMMAGVGREIVSSRASGR-MAAKDASILAWAYGMLGLRPARVIEALTREGLATVQEATPHDLSNLAWGLAKAG 645          
BLAST of mRNA_H-paniculata_contig17747.4237.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.170e-84
Identity = 263/569 (46.22%), Postives = 309/569 (54.31%), Query Frame = 0
Query:    1 RILREVERIPALRRLSDSALRVTSATDADGRLAALALYRLGSAARAAEYASSAPVTVPGTISAPASEVADSTXXXXXXXXXAPVNSHPGTVTERCVSSVISERWDAGEASGKGVVGTAAAGGAP--RSPVLSEERSETSTSGIAELDGVSSER--KPGEMEMMVVD-GNKTNRGDD-----NDDHDHNGNDGVARASAEEVEHSSTVVAGAVAVGQVSPTAAAGSPMEAASDAAVSVAT---VATASFDVEEVTSDQRFEQLVEIVECTAARMSVSDVSKVVWGLSILGHVPRNSLLETLAELITDRLKDEYKHTVPAAVAPSSPXXXXXXXXXXXXXXXXXXTAVTASRVPGTTMSGTEGRSSAAASPQSSGAXAGVGSSEGTXXXXXXMQGAASSARARLGFSDIAVNHDADGV-QATVGVGDV---GGTAATSGTDLATAALAFAYAHARLGIFTGDLLEIIAACTAPKLISMPLRDLANLAWAYAAQRRLDEELMLGIAREITSSRAAGGAMSAKDASVFAWSYGMLGLRPRRVVRTLMREGLATIGEATPHDMSNLAWGLARAG 552
            RILREVERIPALRRLSDSALRVTSAT +DGRLAALALYRLG+AARAAE A S+     G  S  AS V  S           P                      AG    +G V    +GGA   +    +E R ++ST+  A L   +  +   P   E    D G  T  G +      DD    G      A+ E V+     +AG V     SP  A G     A  AAV  +      TA+FD+EEV SDQRFEQLVEI+EC A  +SV      VWGLSILGHVPRNSLLE+LA  +TDRL+ E              XXXXXXXXXXX              V G+T    +G SS +          G GS +                 A             +GV +AT G          A TSGTDLATAAL+FAYAHARL I TG+LLE+IAAC  P+L +MPLRDLANL+WA+A QRRL  E+M G+ REI SSRA G  M+AKDAS+ AW+YGMLGLRP RV+  L REGLAT+ EATPHD+SNLAWGLA+AG
Sbjct:    9 RILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSS-----GLASTAASAVEGSVAADGERAAVGPSK--------------------AGGRGKRGAVERPESGGAEAEKPAAATESRDQSSTAPTATLSAATVRQGGDPFNNEQGQADTGATTGTGIEVPGVMGDDPQEPG------AAGESVKTKDAALAGGV---PRSPEGAGGVEEFGAPAAAVGSSPHKGTTTAAFDMEEVRSDQRFEQLVEIIECVAKDLSV------VWGLSILGHVPRNSLLESLATFLTDRLRQEAXXXXXXXXXXXXXXXXXXXXXXXXDEHGADGGKAA---VGGSTE---DGISSPSTGDSLQEGGLGSGSGKPAEGLNRGQLSGIEGDNAGGXXXXXXXXXXXEGVDKATTGAASAKKQDAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRAFGH-MAAKDASILAWAYGMLGLRPSRVIEALTREGLATVQEATPHDLSNLAWGLAKAG 530          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17747.4237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY5_ECTSI5.150e-8847.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR07_9PHAE1.170e-8446.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17747contigH-paniculata_contig17747:573..4286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17747.4237.1mRNA_H-paniculata_contig17747.4237.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17747 573..4286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17747.4237.1 ID=prot_H-paniculata_contig17747.4237.1|Name=mRNA_H-paniculata_contig17747.4237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=556bp
RILREVERIPALRRLSDSALRVTSATDADGRLAALALYRLGSAARAAEYA
SSAPVTVPGTISAPASEVADSTAAAAAAAAAAPVNSHPGTVTERCVSSVI
SERWDAGEASGKGVVGTAAAGGAPRSPVLSEERSETSTSGIAELDGVSSE
RKPGEMEMMVVDGNKTNRGDDNDDHDHNGNDGVARASAEEVEHSSTVVAG
AVAVGQVSPTAAAGSPMEAASDAAVSVATVATASFDVEEVTSDQRFEQLV
EIVECTAARMSVSDVSKVVWGLSILGHVPRNSLLETLAELITDRLKDEYK
HTVPAAVAPSSPPTSSNSTTTSTSAVAAAATAVTASRVPGTTMSGTEGRS
SAAASPQSSGAAAGVGSSEGTSMPGTEMQGAASSARARLGFSDIAVNHDA
DGVQATVGVGDVGGTAATSGTDLATAALAFAYAHARLGIFTGDLLEIIAA
CTAPKLISMPLRDLANLAWAYAAQRRLDEELMLGIAREITSSRAAGGAMS
AKDASVFAWSYGMLGLRPRRVVRTLMREGLATIGEATPHDMSNLAWGLAR
AGLDDR
back to top