prot_H-paniculata_contig1774.4235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1774.4235.1
Unique Nameprot_H-paniculata_contig1774.4235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 5.190e-102
Identity = 144/188 (76.60%), Postives = 165/188 (87.77%), Query Frame = 0
Query:    1 MEDPGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNKGRNG-GGGEYLKNNK 187
            MEDPGS+KLD++ AK+RRTYQ+WLDRSVIYT  RW  F +SV LFLLRIY+ + WFIVTYGLGIFLLNNLIGFLSPQIDP++EGP LPT+GSDEFRPF+RRLPEFQFWLSS+KG+++ FGMT   +FD+PVFWPILL+YFI+LMFLTMKRQVKHMIKHKYVPWNWGKA Y     NG GGG+  KNNK
Sbjct:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKGGASNGTGGGKPFKNNK 188          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.430e-71
Identity = 104/173 (60.12%), Postives = 131/173 (75.72%), Query Frame = 0
Query:    1 MEDPGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNK 173
            M++P   K ++F +++R T Q WLD S  Y T RW+FF + + L++LR+Y+   WFI+TYGLGI LLNN IGFLSPQ+DP++EG  LPT  SDE RPF RRLPEF+FWL+S + V L F MT  +IFD+PVFWPILL+YF  L F TMKRQ+ HMIKHKYVPW WGK +Y+ K
Sbjct:   10 MDEPS--KFEVFQSQLRITTQQWLDWSTPYVTARWIFFVVLLSLYMLRVYLVNGWFIITYGLGIHLLNNFIGFLSPQMDPESEGATLPTFESDEPRPFRRRLPEFKFWLASARAVCLSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTGK 180          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.630e-70
Identity = 122/219 (55.71%), Postives = 142/219 (64.84%), Query Frame = 0
Query:    4 PGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEK------------------------------------------GVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNKGRNGGGG 180
            P   KL+   A+V RTYQHWLDRSVIY TGRWV F + + ++LLR+Y+ Q WFIVTYGLGIFLLNN IGFLSPQ+DP+ +GP LPTA +DEFRPF RRLPEFQFW SS +                                          GV+    MT   +FDVPVFWPILL+YF++L FLTMKRQ+KHMIKH+YVPWNWGKAKY    R G GG
Sbjct:    8 PTPGKLEQLRAQVSRTYQHWLDRSVIYHTGRWVGFGVLLGVYLLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQVDPEMDGPGLPTASTDEFRPFTRRLPEFQFWHSSTRDAAXXXXXXXXXXXXXXXXXXXSFRXXXXXXXXXXXXXXXXRGVLTALVMTHFSLFDVPVFWPILLVYFVVLFFLTMKRQIKHMIKHRYVPWNWGKAKY----RGGDGG 222          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.850e-69
Identity = 103/171 (60.23%), Postives = 134/171 (78.36%), Query Frame = 0
Query:    9 LDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSD-EFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNKGRNGG 178
            ++ FL K++R +Q  LD S +Y   RW+ F + ++++++R      W+IVTYGLGIFLLNN IGFLSPQ+DP+ EGPVLPT+  D EFRPF+RR+PEF+FW SS KGV++ F MT    FD+PVFWPILL+Y+I L+FLTMKRQ+KHMIKHKYVPW++GKAKY+  G  GG
Sbjct:   19 IEKFLVKIQRQFQRILDISTVYVITRWLIFFVCILIYVIRTASINGWYIVTYGLGIFLLNNFIGFLSPQMDPENEGPVLPTSSDDAEFRPFSRRVPEFKFWYSSTKGVLIAFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKYAAPGGAGG 189          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A7S2V4J3_9STRA (Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4J3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.710e-69
Identity = 102/166 (61.45%), Postives = 127/166 (76.51%), Query Frame = 0
Query:   12 FLAKVR----RTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNK 173
            F  K+R    R YQH+LD+S I+T  RW FF L + ++ LR+Y+   W+IVTYGLGIFLLNN IGFLSPQ+DPD++GPVLP+  SDEFRPF RRLPEFQFW +  + VI+ F MT  ++FD+PVFWPILL YF +L  LTMKRQ+KHMI H YVPWN GK ++ +K
Sbjct:    8 FFEKLRFTLSRRYQHFLDKSTIHTVPRWGFFILCLGIYALRVYLVNGWYIVTYGLGIFLLNNFIGFLSPQVDPDSDGPVLPSKDSDEFRPFTRRLPEFQFWHACTRAVIIAFFMTFFKVFDIPVFWPILLFYFFVLFVLTMKRQIKHMITHGYVPWNRGKQRFQSK 173          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.700e-67
Identity = 107/172 (62.21%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    7 TKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAE---GPVLPTAGSD--EFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNK 173
            +KL++F AK+ RTYQH+LD+S IYT  RW+ F   + L+LLRIYV   +F+VTY LGIFLLNNLIGFL+PQ+DP+A+   G  LPT  +D  EFRPF RRLPEFQFW S  KG++  F MT   +FDVPVFWPILL+YFI+L  LTMKRQ++HMIK+KYVP++WGK K++ K
Sbjct:    9 SKLEVFQAKLSRTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRPFERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTMKRQIQHMIKYKYVPFSWGKPKHTGK 180          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A0G4H715_VITBC (Protein RER1 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H715_VITBC)

HSP 1 Score: 210 bits (534), Expect = 2.710e-66
Identity = 94/154 (61.04%), Postives = 125/154 (81.17%), Query Frame = 0
Query:   18 RTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYS 171
            R Y  ++DR+  Y  GRW+FF   V LF+LRIY+TQ ++IVTYGLGI+LLN LIGFLSPQ+DP+ EGPVLP   ++E+RPF RRLPEF+ W S+ + V++   MT  R+FD+PVFWPILLMYF++L  LTMK+Q++HMIK++YVPW+WGKA+Y+
Sbjct:   21 RIYSSYIDRTATYIKGRWLFFFAMVALFVLRIYLTQGFYIVTYGLGIYLLNLLIGFLSPQVDPETEGPVLPVRDAEEYRPFQRRLPEFKCWQSATRAVVISITMTFFRMFDLPVFWPILLMYFLVLFVLTMKQQIRHMIKYRYVPWSWGKARYA 174          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A7S2FFP1_9STRA (Protein RER1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFP1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.910e-65
Identity = 100/187 (53.48%), Postives = 133/187 (71.12%), Query Frame = 0
Query:    1 MEDPGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNKGRNGGGGEYLKNNK 187
            M+    + +  F AK    +Q  LDRS  +  GRW+ F   + ++ LR+Y+   W+I+TYGLGI+LLNNLIGFLSPQ+DPD+EGP LPT  S+EFRPF+RRLPEF+FW +S + V + F +T  +IFD+PVFWPILL+YFI L  LTMKRQ+KHM+KH YVPW  GK +++      GGG   K++K
Sbjct:    1 MQQEPPSSISGFNAKFNSQFQMLLDRSTPHIVGRWIAFVFLMGIYTLRVYLVNGWYIITYGLGIYLLNNLIGFLSPQVDPDSEGPCLPTRDSEEFRPFSRRLPEFKFWYASARAVCVSFFLTFFQIFDIPVFWPILLLYFIALFILTMKRQIKHMMKHNYVPWASGKKRFT------GGGAAKKDSK 181          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A2R5GJ85_9STRA (Protein RER1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ85_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.950e-65
Identity = 96/170 (56.47%), Postives = 128/170 (75.29%), Query Frame = 0
Query:    6 STKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSD--EFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYSNK 173
            ++ ++ F A+V R YQH LD+S ++   RW  F+  ++ +L+R+Y+   WFIVTYGLGI+LLN  IGFLSPQ+DP+ EGPVLPTAG D  E+RPFNRR+PEF+FW  +   V++  GMT    FD+PVFWPILL+YFI+L  +TM++Q+ HMIKHKYVP +WGK  YS K
Sbjct:    9 ASAVEKFWAQVGRQYQHLLDKSTVHLKARWAAFAGLLLFYLIRVYMLNGWFIVTYGLGIYLLNMFIGFLSPQVDPETEGPVLPTAGRDTEEYRPFNRRVPEFKFWHKATVAVVVSIGMTFFSFFDIPVFWPILLVYFILLFVMTMRKQIAHMIKHKYVPVSWGKKTYSKK 178          
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Match: A0A8J2X2Q3_9STRA (Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2Q3_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.780e-63
Identity = 100/177 (56.50%), Postives = 127/177 (71.75%), Query Frame = 0
Query:    3 DPGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFS----LSVMLFLLRIYVTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNRRLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFW----PILLMYFIILMFLTMKRQVKHMIKHKYVPWNWGKAKYS 171
            D   T  ++  + + +  Q  LDRS ++   RW+ F+    + + L+ LR+Y+ Q WFIVTYGLGIFLLNN IGFLSPQIDPD +GP+LPT+  D F+PF+RR+PEF+FW +S KGV   F MT   IFDVPVFW    PILL+YF  L FLTMKRQ+KHMIKH+YVPW+WGK  Y+
Sbjct:    5 DEKPTVAEVVSSGIAQRLQQLLDRSTVHILPRWLGFARPSAVCLALYGLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQIDPDGDGPLLPTSTGDNFKPFSRRVPEFKFWYTSIKGVCTAFFMTFFSIFDVPVFWHSAVPILLVYFFALFFLTMKRQIKHMIKHEYVPWSWGKKSYA 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1774.4235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI5.190e-10276.60Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S2W0T1_9STRA1.430e-7160.12Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A835YJT4_9STRA2.630e-7055.71Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A7S3K339_9STRA2.850e-6960.23Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7S2V4J3_9STRA3.710e-6961.45Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A7R9YCX7_9STRA1.700e-6762.21Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A0G4H715_VITBC2.710e-6661.04Protein RER1 n=1 Tax=Vitrella brassicaformis (stra... [more]
A0A7S2FFP1_9STRA3.910e-6553.48Protein RER1 n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A2R5GJ85_9STRA5.950e-6556.47Protein RER1 n=1 Tax=Hondaea fermentalgiana TaxID=... [more]
A0A8J2X2Q3_9STRA1.780e-6356.50Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..181
e-value: 1.9E-71
score: 237.7
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 14..171
e-value: 5.2E-65
score: 218.3
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 12..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1774contigH-paniculata_contig1774:17436..22689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1774.4235.1mRNA_H-paniculata_contig1774.4235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1774 17374..23875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1774.4235.1 ID=prot_H-paniculata_contig1774.4235.1|Name=mRNA_H-paniculata_contig1774.4235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MEDPGSTKLDIFLAKVRRTYQHWLDRSVIYTTGRWVFFSLSVMLFLLRIY
VTQSWFIVTYGLGIFLLNNLIGFLSPQIDPDAEGPVLPTAGSDEFRPFNR
RLPEFQFWLSSEKGVILGFGMTLLRIFDVPVFWPILLMYFIILMFLTMKR
QVKHMIKHKYVPWNWGKAKYSNKGRNGGGGEYLKNNK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1