mRNA_H-paniculata_contig17708.4228.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17708.4228.1
Unique NamemRNA_H-paniculata_contig17708.4228.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 348 bits (893), Expect = 9.670e-112
Identity = 175/198 (88.38%), Postives = 188/198 (94.95%), Query Frame = 2 
Query: 1040 SAFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            SAFNGAAL+ S K+ S+MKM+FESEIGAQ PLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFTLGGN FG+SWDAMSEETQASKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDLVGASYTFN
Sbjct:   20 SAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 1.110e-111
Identity = 174/201 (86.57%), Postives = 189/201 (94.03%), Query Frame = 2 
Query: 1031 LNYSAFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            L+ SAFNGAA++ S KSSS+MKM+FESEIGAQPPLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGN F SSWDAMSEETQASKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA YTFN
Sbjct:   21 LDVSAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 3.070e-110
Identity = 173/198 (87.37%), Postives = 186/198 (93.94%), Query Frame = 2 
Query: 1040 SAFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            SAFNGAA++   KSSS+MKM+FESEIGAQPPLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPPAGLAQI AF+GFLELAVMKNVEGSFPGDFT GGN F SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PYIINDL+GASYTFN
Sbjct:   21 SAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 2.310e-109
Identity = 174/197 (88.32%), Postives = 187/197 (94.92%), Query Frame = 2 
Query: 1043 AFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            AFNGAA++   KSSS+MKM+FESEIGAQPPLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFTLGGN FGSSWDAMSEETQASKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA YTFN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 340 bits (871), Expect = 1.460e-108
Identity = 172/198 (86.87%), Postives = 181/198 (91.41%), Query Frame = 2 
Query: 1040 SAFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            SAFNGAALS   KSSS+MKM+FESEIGAQ PLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDF +GGN F SSWD+MS ETQASKRAIELNNGRAAQMGIL MMVHEELSNQPYI NDL+GASYTFN
Sbjct:   14 SAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211
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BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 335 bits (859), Expect = 1.050e-106
Identity = 170/198 (85.86%), Postives = 183/198 (92.42%), Query Frame = 2 
Query: 1040 SAFNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            SAFNGAAL+ S KSSS+MKM+FESEIGAQ PLGF+DPLG+L DADQ+ F+RLRYVEVK GRIAMLAIAGHLTQQNARLPGMLS SA +SFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDFTLGGN F SSWDAMS ETQASKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GASY FN
Sbjct:   19 SAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 1.320e-105
Identity = 163/181 (90.06%), Postives = 173/181 (95.58%), Query Frame = 2 
Query: 1091 MKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            MKM+FESEIGAQPPLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQN RLPGMLS SA +SFADMPNGVAALSKIPPAGLAQI AFIGFLELAVMKNVEGSFPGDFTLGGN FGSSWDAMSEETQASKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA Y FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 322 bits (824), Expect = 4.950e-102
Identity = 159/181 (87.85%), Postives = 169/181 (93.37%), Query Frame = 2 
Query: 1091 MKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            MKM+FE EIGAQ PLGF+DPLG+L DADQERF+RLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLS SA +SFADMPNGVAALSKIPP GLAQI  FIGFLELAVMKNVEGSFPGDFTLGGN F SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GASY FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 306 bits (783), Expect = 1.620e-95
Identity = 153/196 (78.06%), Postives = 169/196 (86.22%), Query Frame = 2 
Query: 1046 FNGAALSQSVKSSSSMKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            FNGAAL+ S KSSS+MKM+FESEIGAQPP+GF+DPLG++ DADQERFDRLRYVE+KHGRIAMLA+ GH+TQQN RLPGMLS    ++FAD PNGVAA SKIPP G  QII  IG  EL V+K VEGSFPGD T GGN F S+WD MSEETQASKRAIELNNGRAAQMGILAMMVHE+LSNQPYIINDL GA+Y FN
Sbjct:   17 FNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212
[Close]
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 1.440e-89
Identity = 147/206 (71.36%), Postives = 162/206 (78.64%), Query Frame = 2 
Query: 1091 MKMAFESEIGAQPPLGFFDPLGMLTDA-------------------------DQERFDRLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGFLELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYTFN 1633
            MKM+FESE+GAQPPLGFFDPLG+L D                          DQERFDRLRYVEVKHGRI+MLA+AGHL  QN R PG LS  A ++FADMPNGVAA+SKIPP GLAQI+AFIGFLEL VMKNVEGSFPGD T+GGN F + WDAMSEET+ SKRAIELNNGRAAQMGILAMM+HEE+SNQPYIINDL+ A YTFN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17708.4228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FCPB_MACPY9.670e-11288.38Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE1.110e-11186.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCX6_9PHAE3.070e-11087.37LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
D8LNK6_ECTSI2.310e-10988.32Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPF_MACPY1.460e-10886.87Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
FCPC_MACPY1.050e-10685.86Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
A0A6H5JDS8_9PHAE1.320e-10590.06LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY4.950e-10287.85Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPE_MACPY1.620e-9578.06Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
A0A6H5KBS3_9PHAE1.440e-8971.36LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17708contigH-paniculata_contig17708:2843..5267 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.6
Seed ortholog evalue5.7e-92
Seed eggNOG ortholog2880.D7G1R7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size2425
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17708.4228.1prot_H-paniculata_contig17708.4228.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17708 3933..4478 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929385.1874785-UTR-H-paniculata_contig17708:2842..39321622929385.1874785-UTR-H-paniculata_contig17708:2842..3932Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17708 2843..3932 +
1691480839.9954345-UTR-H-paniculata_contig17708:2842..39321691480839.9954345-UTR-H-paniculata_contig17708:2842..3932Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17708 2843..3932 +
1622929385.2546842-UTR-H-paniculata_contig17708:4478..52671622929385.2546842-UTR-H-paniculata_contig17708:4478..5267Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17708 4479..5267 +
1691480840.012998-UTR-H-paniculata_contig17708:4478..52671691480840.012998-UTR-H-paniculata_contig17708:4478..5267Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17708 4479..5267 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929385.2431557-CDS-H-paniculata_contig17708:3932..44781622929385.2431557-CDS-H-paniculata_contig17708:3932..4478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17708 3933..4478 +
1691480840.004927-CDS-H-paniculata_contig17708:3932..44781691480840.004927-CDS-H-paniculata_contig17708:3932..4478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17708 3933..4478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17708.4228.1

>prot_H-paniculata_contig17708.4228.1 ID=prot_H-paniculata_contig17708.4228.1|Name=mRNA_H-paniculata_contig17708.4228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MKMAFESEIGAQPPLGFFDPLGMLTDADQERFDRLRYVEVKHGRIAMLAI
AGHLTQQNARLPGMLSTSAGISFADMPNGVAALSKIPPAGLAQIIAFIGF
LELAVMKNVEGSFPGDFTLGGNWFGSSWDAMSEETQASKRAIELNNGRAA
QMGILAMMVHEELSNQPYIINDLVGASYTFN*
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mRNA from alignment at H-paniculata_contig17708:2843..5267+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17708.4228.1 ID=mRNA_H-paniculata_contig17708.4228.1|Name=mRNA_H-paniculata_contig17708.4228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2425bp|location=Sequence derived from alignment at H-paniculata_contig17708:2843..5267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTAATTCATGACGGTGTCTGCGGCGCCGTCTCTGGGCAGGATATGCACT
CTCTCAATATGGCCCAGCATTAAATATGGGTCGTGACTTTTACTTGATGA
GTTGTTATAACGGCTTGTTTGTGACCGGACCGTTCATGAGGAGAGGAGAT
GAGGGTCAAGTAAGGCTCACCACCCTGCCATGAGATCAGCGATTCCATGC
CGTTGAAGTAGATCATTTCTAGAGAATTTTAGGTTAACTTAATGTCTGTT
GGGATCCAATTTACGTTCTATCATGCGATTCATATCTGTGTACACGACTT
CTCGCACCTCAGTTTATACACTTCAAATGTACCATTCACGACGACTGCGC
GTTGTAGGAGGATGCTGCCTTCCAAACCTCAATAGAAACTTGTTCATACA
CATTTTTCATTGTTTTCCATTGAACAGGTTTGGAACGTTGTTGAGTTCGC
AGGCACTACAGTTTCCGATGGTGCATTGTTGAGATTGTATGAACGTATGG
TCCCCTTTGCCACATCCGCGATATTGTTTTGTCTCGTGTTGTATCTGTCA
TGCCGTGGGCGTCCTGAAGCGGCACTCGACTCTCCTTCGCCTCAGATGTA
GCGCTGGTTTGAATATTTTGTGGCAATGTTTAGCTGGTTGATGGCTTGAA
TGTTTTTAATGAGATTGCATTGTTGTAGACGTCGATACTCGGCCCCCACT
GTTTTCATATGGAACCTCACTCACACCTCGAGGAAATAATAGTCTTGCCT
TCTAGTACAAACCCCTACTGAATATACTGTGTGAGTTGGCTCTGCAGTGA
AGCCCCGAGTGGCATCAGGGTATCGGCGATCGCTGAAAGTGTGGAAAAAC
CTCTGTTGCAGCAGCTACAGTGCCACCTACTGCTGTAATTGCAAACTTTC
GTGTCATGTTAAACCAGGTTCAGTCTGGGTGCAGAGTGATACGTATTAAA
TAATGAAATTCACAGTTGCTTGTTCAAGTTCCTCACCTTAACCCTCTGCA
ACGTGATCCTCCTGATGTGCTGTGTTGCAATTAAATTACAGCGCCTTCAA
CGGTGCCGCCTTGTCGCAGTCCGTGAAGTCTTCGTCCTCAATGAAGATGG
CCTTCGAGTCGGAGATTGGTGCGCAGCCCCCTCTCGGCTTCTTCGACCCG
CTCGGCATGCTGACTGATGCCGACCAGGAGAGGTTCGACCGCCTCCGGTA
CGTGGAGGTGAAGCACGGGCGCATTGCTATGCTCGCCATCGCGGGTCACT
TGACCCAGCAGAACGCCCGCCTTCCCGGTATGCTTTCCACCTCGGCGGGC
ATCTCCTTCGCAGACATGCCCAACGGTGTGGCGGCACTCTCCAAGATCCC
CCCGGCCGGCCTTGCCCAGATCATTGCGTTCATCGGCTTCCTCGAGCTAG
CTGTGATGAAGAATGTGGAAGGCTCTTTCCCAGGAGACTTCACTTTGGGC
GGCAACTGGTTCGGATCTTCGTGGGATGCCATGTCCGAGGAGACCCAGGC
CTCCAAGCGGGCGATCGAGTTGAACAACGGGCGAGCAGCGCAGATGGGTA
TCCTTGCCATGATGGTGCACGAGGAGCTCTCCAACCAGCCCTACATCATC
AACGACCTCGTCGGCGCGTCGTACACATTCAACTAAAGTGTACAACTGTA
GCGGTTGCAGCCACAGATGTAGAAATATTATGATGGATATAGGGTTAGGG
GGCGGAGCATTTTTATCAAACGCAGTGGCGAGACGTTCTTCAGTTTTCTT
TTAGCGCCTTGTCCGTGTGGGATTGGAGTTGTCCTTTTTGTGCGTCACTT
CAAACTGATGTGTAGGTGAATAGTCTCCGGGGGCACACAACAATAGAGTC
GGGATGGGTTTGTCATTGTAGCGTTCTGGTGAAGCTACCTAACGGCTGTC
CGTTATGAGCGCAGTATCGGTGGTCGAAACTAGCATTCTCAGCAACGCGC
TGGAATACGATGAGCTTGGTCTGAATACGCAATGCAAAACATGTTTTTCT
GTTATACTGAGTGCGATCAAGGGCAATCCGCTGGGCGGTGCCTTATGATG
TATCTCCGATTGGAGCTGGGATCTGACCTTCAAAAGAAGGTACACGATAT
TGAGACGGCCGATGCATATTATCCGGTAGGGTCTGTTTTCCGTGAAAGCC
CGAGAATTGTCATCCGACGACATATCGTATTTTTCTTGTCCAATATAAAG
TTTATATCGTAAATGCAGAGCATATGATCAAATGTACCATGGATATCCTC
CCTTCGTTGCATAATTCTGCAACGACCAGCGGAAGAAAAGAACAGACATG
TAAACAAGAATATTTCCCCTCTTGTGATATGAATTCTCTCTAATACGCAA
TAAAGTCAGAAATTTCGCAAGCGCCCGTTTGCCGTTTCATCCATATATCA
ATATATTGTCCACGTATGTTTTTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig17708:2843..5267+

>mRNA_H-paniculata_contig17708.4228.1 ID=mRNA_H-paniculata_contig17708.4228.1|Name=mRNA_H-paniculata_contig17708.4228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at H-paniculata_contig17708:2843..5267+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATGGCCTTCGAGTCGGAGATTGGTGCGCAGCCCCCTCTCGGCTT
CTTCGACCCGCTCGGCATGCTGACTGATGCCGACCAGGAGAGGTTCGACC
GCCTCCGGTACGTGGAGGTGAAGCACGGGCGCATTGCTATGCTCGCCATC
GCGGGTCACTTGACCCAGCAGAACGCCCGCCTTCCCGGTATGCTTTCCAC
CTCGGCGGGCATCTCCTTCGCAGACATGCCCAACGGTGTGGCGGCACTCT
CCAAGATCCCCCCGGCCGGCCTTGCCCAGATCATTGCGTTCATCGGCTTC
CTCGAGCTAGCTGTGATGAAGAATGTGGAAGGCTCTTTCCCAGGAGACTT
CACTTTGGGCGGCAACTGGTTCGGATCTTCGTGGGATGCCATGTCCGAGG
AGACCCAGGCCTCCAAGCGGGCGATCGAGTTGAACAACGGGCGAGCAGCG
CAGATGGGTATCCTTGCCATGATGGTGCACGAGGAGCTCTCCAACCAGCC
CTACATCATCAACGACCTCGTCGGCGCGTCGTACACATTCAACTAAATGA
AGATGGCCTTCGAGTCGGAGATTGGTGCGCAGCCCCCTCTCGGCTTCTTC
GACCCGCTCGGCATGCTGACTGATGCCGACCAGGAGAGGTTCGACCGCCT
CCGGTACGTGGAGGTGAAGCACGGGCGCATTGCTATGCTCGCCATCGCGG
GTCACTTGACCCAGCAGAACGCCCGCCTTCCCGGTATGCTTTCCACCTCG
GCGGGCATCTCCTTCGCAGACATGCCCAACGGTGTGGCGGCACTCTCCAA
GATCCCCCCGGCCGGCCTTGCCCAGATCATTGCGTTCATCGGCTTCCTCG
AGCTAGCTGTGATGAAGAATGTGGAAGGCTCTTTCCCAGGAGACTTCACT
TTGGGCGGCAACTGGTTCGGATCTTCGTGGGATGCCATGTCCGAGGAGAC
CCAGGCCTCCAAGCGGGCGATCGAGTTGAACAACGGGCGAGCAGCGCAGA
TGGGTATCCTTGCCATGATGGTGCACGAGGAGCTCTCCAACCAGCCCTAC
ATCATCAACGACCTCGTCGGCGCGTCGTACACATTCAACTAA
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