prot_H-paniculata_contig17707.4227.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17707.4227.1
Unique Nameprot_H-paniculata_contig17707.4227.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length539
Homology
BLAST of mRNA_H-paniculata_contig17707.4227.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.540e-86
Identity = 262/531 (49.34%), Postives = 310/531 (58.38%), Query Frame = 0
Query:   25 ARSAVPCDPDGCGEVVARAQSAADAIGDADSEQIGLEKRGQSESEARIVVKRWEATMAQGEVDKKLRAEERKALEKLEVMLKVYLQDEERLETREREELAQGQRCSSSSAVEGSG--------SWAAAMGPCQDTAAEREAAAKVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEGTTTS-----------ESGAADITTEDVLDLRWPTSPPAQAQPRETPGPPGKMGFEGEXXXGEGRSGKDSADAWAQQKEEKRGAKEPPPTAMTTATMSLRTYVKQRQQGSGGKRNGDGGAHGMTEERKAEELRKTALLGPVLNDGEKGAYLGLTYLLRIAGLPTLGVVRGLLTAVEFLRRQAAAVAAVVAG---WLRFP-EVVRAALEGYRDEGLPGVSRHLDYRRYPALRSFVVRWDDFLDGRGRFLLVMWDSPVALENFIFPERDYAHERPEAAMLREGLALTRAAVEARDVDDKRRWG-GKXXXXXXXXHAEAERLYRLDLGEGRRFAALAEMCLYLEAG 531
            AR+   CD +GC  V+  A++   A+      + GLE R  +E  +  VV  W+AT+  GEVD++++ +E KA+EKLEV+LKVYLQDEER E RER +LA+  RC ++S  EG          + AAA+GPC++   EREAAAKVRAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   E GA+  T ED+L L W     A     +  G     G  G    G                                       YVKQRQ            A     E++AEELRKTALLGPVLNDGE+G YLGLT LLR+AGLP L  +RGL  A  FLR +AA  AA +A    W   P   VR ALEGYRD GLPG+S HLDYRRYP LRS V+ WD+FL G G+ LLVMWD+PVAL +F FP RD  HERPEAAMLREG+A  RA ++ +  D   R G GK         +EA+RL  LDLGEG RFAALAE CL LE G
Sbjct:  121 ARATATCDRNGCERVLEDARTT--AMEAYRRVEAGLEARKGAEERSERVVAEWQATLNAGEVDEEVQKQELKAVEKLEVLLKVYLQDEERKERRERVQLAEQGRCETASRREGGDGQGGAGRRAMAAALGPCEENTTEREAAAKVRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEEGAS--TVEDILGLEWVVDVSAD----DDDGAFRDRGTGGNREPGGXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXAYVKQRQXXXXXXXXXXXQA--KAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDRAARAAAGLAASESWGLAPASTVRVALEGYRDRGLPGISPHLDYRRYPTLRSVVLHWDEFLHGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQEKKPDTAGRGGRGKRRRE----ESEAKRLSGLDLGEGSRFAALAEKCLDLEEG 630          
BLAST of mRNA_H-paniculata_contig17707.4227.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.480e-76
Identity = 230/403 (57.07%), Postives = 257/403 (63.77%), Query Frame = 0
Query:  142 AAAMGPCQDTAAEREAAAKVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEGTTTS---------ESGAADITTEDVLDLRWPTSPPAQAQPRETPGPPGKMGFEGEXXXGEGRSGKDSADAWAQQKEEKRGAKEPPPTAMTTATMSLRTYVKQRQQGSGGKRNGDGGAHGMTEERKAEELRKTALLGPVLNDGEKGAYLGLTYLLRIAGLPTLGVVRGLLTAVEFLRRQAAAVAAVVAG---WLRFP-EVVRAALEGYRDEGLPGVSRHLDYRRYPALRSFVVRWDDFLDGRGRFLLVMWDSPVALENFIFPERDYAHERPEAAMLREGLALTRAAVEARDVDDKRRWGGKXXXXXXXXHAEAERLYRLDLGEGRRFAALAEMCLYLEAG 531
            AAA+GPC+D  AEREAAAKVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 E GA+  T ED+L L W     A     +  G     G  G    G               +EE+         A TTA +SL+ YVKQRQ GS     G G A     E++AEELRKTALLGPVLNDGE+G YLGLT LLR+AGLP L  +RGL  A  FLR  AA  AA +A    W   P   VR ALE YRD GLPG+S HLDYRRYP LRS V+RWD+FL G G+FLLVMWD+PVAL +F FP RD  +ERPEAAMLREG+A  RA ++ R  D     GG XXXXXXX  +EA+RL  LDLGEG RFAALA  CL LE G
Sbjct:    2 AAALGPCEDNTAEREAAAKVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEEGAS--TVEDILGLEWVVDMTAD----DDGGAFRDRGTGGNRESGGXXXXXXXXXXXXXXREEE--------DAQTTA-LSLKAYVKQRQAGSAAANGGRGQA--KAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDWAARAAAGLAASESWGLTPASTVRVALEDYRDRGLPGISPHLDYRRYPTLRSVVLRWDEFLHGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQERKPDTA---GGXXXXXXXXEESEAKRLSGLDLGEGSRFAALAGKCLDLEEG 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17707.4227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQB3_ECTSI1.540e-8649.34Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A6H5JF29_9PHAE8.480e-7657.07MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..118
NoneNo IPR availableCOILSCoilCoilcoord: 160..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17707contigH-paniculata_contig17707:675..5311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17707.4227.1mRNA_H-paniculata_contig17707.4227.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17707 675..5311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17707.4227.1 ID=prot_H-paniculata_contig17707.4227.1|Name=mRNA_H-paniculata_contig17707.4227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=539bp
MLQLSAGVCDCCDGSDELGNLGGGARSAVPCDPDGCGEVVARAQSAADAI
GDADSEQIGLEKRGQSESEARIVVKRWEATMAQGEVDKKLRAEERKALEK
LEVMLKVYLQDEERLETREREELAQGQRCSSSSAVEGSGSWAAAMGPCQD
TAAEREAAAKVRAARAAARAKKDADEEKKKRARDDKKKRPKPGQGKTKKR
KSAEGTTTSESGAADITTEDVLDLRWPTSPPAQAQPRETPGPPGKMGFEG
EEGEGEGRSGKDSADAWAQQKEEKRGAKEPPPTAMTTATMSLRTYVKQRQ
QGSGGKRNGDGGAHGMTEERKAEELRKTALLGPVLNDGEKGAYLGLTYLL
RIAGLPTLGVVRGLLTAVEFLRRQAAAVAAVVAGWLRFPEVVRAALEGYR
DEGLPGVSRHLDYRRYPALRSFVVRWDDFLDGRGRFLLVMWDSPVALENF
IFPERDYAHERPEAAMLREGLALTRAAVEARDVDDKRRWGGKGKGKGKGP
HAEAERLYRLDLGEGRRFAALAEMCLYLEAGVGLRSEE*
back to top