prot_H-paniculata_contig17699.4218.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17699.4218.1
Unique Nameprot_H-paniculata_contig17699.4218.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length368
Homology
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.150e-80
Identity = 145/370 (39.19%), Postives = 229/370 (61.89%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTFG 366
            L++S+YGL QSP +WN T+D  L   G+  T SDPCVY   S +  ++ +++VDDIL+TG   +L+   + +L ++F +T +GEV  ILG++V R+   GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+  + +Q ++  S P Q  + A K + RYL+G+P +PI + R + +L  + D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ + +     EL  +   S  + SD+ GAL +A N+ +S R+KH+T+R+  +++ + R Q+ + H PS  QLADI TK+  +  FA +  +I  F 
Sbjct:  488 LERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 856          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.200e-80
Identity = 142/370 (38.38%), Postives = 226/370 (61.08%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTFG 366
            L++S+YGL QSP +WN T+D  L   G+  T SDPCVY   S +  ++ +++VDDIL+TG   +L+   + +L ++F +T +GEV  ILG++V R+   GTL +SQ  YV + L+RF M  ANP  T G   + +T   +D Q+L     K YQ+M GS+++L QCT+FD+  + +Q ++  S P Q  + A K + RYL+G+P +PI + R + +L  + D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ + +     EL  +   S  + SD+ GAL +A N+ +S R+KH+ +R+  +++ + R Q+ + H PS  QLADI TK+  +  FA +  +I  F 
Sbjct:  124 LERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 492          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 2.520e-80
Identity = 141/370 (38.11%), Postives = 225/370 (60.81%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTFG 366
            L++S+YGL QSP +WN T+D  L   G+  T SDPCVY   + +  ++ +++VDDIL+TG   +L+   + +L ++F +T +GEV  ILG+ V R+   GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+  + +Q ++  S P Q  + A K + RYL+G+P +PI + R + +L  + D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ + +     EL  +   S  + SD+ GAL +A N+ +S R+ ++ +R   +++ + R Q+ + H PS  QLADI TK+  +  FA +  +I  F 
Sbjct:    5 LERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRT-NVALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 372          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 3.760e-80
Identity = 143/370 (38.65%), Postives = 228/370 (61.62%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTFG 366
            L++S+YGL QS  +WN T+D  L  +G+  T SDPCVY   S +  ++ +++VDDIL+TG   +L+   + +L ++F +T +GEV  ILG++V R+   GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+  + +Q ++  S P Q  + A K + RYL+G+P +PI + R + +L  + D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ + +     EL  +   S  + SD+ GAL +A N+ +S R+KH+ +R+  +++ + R Q+ + H PS  QLADI TK+  +  FA +  +I  F 
Sbjct:  332 LERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 700          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.100e-78
Identity = 142/366 (38.80%), Postives = 222/366 (60.66%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKI 362
            L+KS+YGL QSP++WN  I++ L   G+  T SDPCVY   S D   + +++VDDIL+TG    ++   + +LM+ F +T +GEV  ++G+EV R+   GTL +SQ  Y   +L R+ M  ANP  TPG   + +T   +D QLL     +++QA+ GSL++L QCTR+D+  +V Q  R  + P Q  + A K + RYL+G PD+PI + + + +L  + D+S+       RSTTG +FF   GL+ + ++ Q + A +T EAEL AL+  A++ + +     E+G +   S  + SD+ GAL +A+N+ +SSR+KHI +RF  L++  + H++ + H PS   LADI TKH  +  FA +   I
Sbjct:  365 LEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 4.670e-75
Identity = 146/372 (39.25%), Postives = 209/372 (56.18%), Query Frame = 0
Query:    1 MSLKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGL--QLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTF 365
            M L KS+YGL QSP  W +TID  +  +GF    SDPCVY    N   I  +L+VDD+L+ G     +  V+ KL  +F +T LGE SL+LGME+ R+    TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    ED+ LLD   T+KYQ +VGSL+++ Q  R+DI  +  Q AR M+ P++  +VA K   RYL G  D  IT+ +   KL  + D+++       +ST+  +   AN  + F S LQ +TA ST EAEL+A A   K+ +    +  ELG   +     V  DN   LH   N ++SSR+KHI +RF  +++ +   ++ I + P+ D LADI TKH  +  F  L   I  F
Sbjct:   65 MKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.250e-74
Identity = 145/378 (38.36%), Postives = 229/378 (60.58%), Query Frame = 0
Query:    3 LKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLG-------YPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQG-ICLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTFG 366
            L++S+YGL QSP +WN T+D  L   G+  T SDPCVY   S ++ ++ S++VDDIL+TG   +L+   + +L ++F +T +GEV  ILG++V R+   GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+  + +Q ++  S P Q  + A K + RYL+G+P +PI + R + +L         + D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++  + +     EL  +   S  + SD+ GAL +A N+ +S R+KH+ +R+  +++ + R Q+ + H PS  QLADI TK+  +  FA +  +I  F 
Sbjct:  711 LERSLYGLLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 1087          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 1.070e-69
Identity = 146/372 (39.25%), Postives = 209/372 (56.18%), Query Frame = 0
Query:    1 MSLKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGL--QLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTF 365
            M L KS+YGL QSP  W +TID  L  +GF    SDPCVY    N   I  +L+VDD+L+ G     +  V+ KL  +F +T LGE SL+LGME+ R+    TL +SQ  Y  S+L+RF +S + PT TPG  ++ +    ED+ LLD   T+KYQ +VGSL+++ Q  R+DI  +  Q AR M+ P++  +VA K   RYL G  D  IT+ +   KL  + D+++       +ST+  +   AN  + F S LQ +TA ST EAEL+A A    + +    +  ELG   +     V  DN   LH   N ++SSR+KHI +RF  +++ +   ++ I +VP+ D LADI TKH  +  F  L   I  F
Sbjct: 1294 MKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 4.810e-69
Identity = 146/372 (39.25%), Postives = 207/372 (55.65%), Query Frame = 0
Query:    1 MSLKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGL--QLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKILTF 365
            M L KS+YGL QSP  W +TID  L  +GF    SDPCVY    N   I  +L+VDD+L+ G     +  V+ KL  +F +T LGE SL+L ME+ R+    TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    ED+ LLD   T+KYQ +VGSL+++ Q  R+DI  +  Q AR M+ P++  +VA K   RYL G  D  IT+ +   KL  + D+++       +ST+  +   AN  + F S LQ +TA ST EAEL+A A   K+ +    +  ELG   +     V  DN   LH   N ++SSR+KHI +RF  +++ +   ++ I +V + D LADI TKH     F  L   I  F
Sbjct:  625 MKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.370e-67
Identity = 144/382 (37.70%), Postives = 207/382 (54.19%), Query Frame = 0
Query:    1 MSLKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIMFSLFVDDILVTGPTDRLLMDVRN-------------KLMNKFTITSLGEVSLILGMEVLRNEHIGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFRYLQGHPDVPITHSRCEPKLLGYPDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITATSTTEAELIALATCAKQGICLLGICRELGL--QLTSCEVRSDNRGALHLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHCERVVFAQLRSKI 362
            M L KS+YGL QSP  W +TID  L  +GF    SDPCVY    N   I  +L+VDD+L+ G     +  + +             KL  +F +T LGE S  LGM++ R+    TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    ED+ LLD   T+KYQ +VGSL+++ Q  R+DI  +  Q AR M+ P++  +VA K   RYL G  D  IT+ +   KL  + D+++       +ST+  +   AN  + F S LQ +TA ST EAEL+A A   K+ +    +  ELG   +     V  DN   LH   N ++SSR+KHI +RF  +++ +   ++ I +VP+ D LADI TKH  +  F  L   I
Sbjct:  273 MKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLI 653          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17699.4218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE92_9PHAE1.150e-8039.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE1.200e-8038.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE2.520e-8038.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE3.760e-8038.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE2.100e-7838.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5U2_9PHAE4.670e-7539.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJR8_9PHAE1.250e-7438.36Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KJH6_9PHAE1.070e-6939.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE4.810e-6939.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE1.370e-6737.70Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..130
e-value: 1.5E-28
score: 100.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 147..338
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 147..338
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17699contigH-paniculata_contig17699:4079..5182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17699.4218.1mRNA_H-paniculata_contig17699.4218.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17699 4079..5431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17699.4218.1 ID=prot_H-paniculata_contig17699.4218.1|Name=mRNA_H-paniculata_contig17699.4218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=368bp
MSLKKSVYGLRQSPNVWNHTIDNELRSMGFAPTVSDPCVYSKGSNDTYIM
FSLFVDDILVTGPTDRLLMDVRNKLMNKFTITSLGEVSLILGMEVLRNEH
IGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAA
ATKKYQAMVGSLIFLTQCTRFDICVSVMQAARCMSAPTQQRLVAVKRIFR
YLQGHPDVPITHSRCEPKLLGYPDASYCTRSTTGTMFFFANGLVHFSSRL
QKITATSTTEAELIALATCAKQGICLLGICRELGLQLTSCEVRSDNRGAL
HLAANSNYSSRSKHITIRFAALKDWIRRHQLIIDHVPSTDQLADILTKHC
ERVVFAQLRSKILTFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like