prot_H-paniculata_contig1768.4213.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1768.4213.1
Unique Nameprot_H-paniculata_contig1768.4213.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length629
Homology
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Match: D7G3Y1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y1_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.460e-112
Identity = 325/652 (49.85%), Postives = 392/652 (60.12%), Query Frame = 0
Query:    1 MELESLEHFDGDVRRVLNAVQMSVVCRGPKEAAQFCRELKAHPQVKAVMWNGIGPEASSEGSRQAFQAGNAFVHLKGSDHVVQIQLRREMFLGTAGVDYKSLEWARGLKAPVMTGAEPCLRFDGLRMPVKERMLALVRQDWMGLRCMLPQLLEAMGKAEEAENLLRQTDAEERALRHLAESHDEDKSGDDETAEATATAASACAMSDLAMVLQEQGKLTEAEELFRKALAMRIEVLGPDHPCVGLSASNLAGVLRDQGRREEATAELLSTMKLPFPPTPVSSHRFLPTPPRXXXXXXXXXXXXPNASQAAAAALGSEREESIPGRPTMYPPVPSPPLADFMVDDRADPKTL-MESPETIGERYASSHSLKDLAATAVVGGTLDATADALSSTGAAVAAAVTAISAGENAKTARFALA----------------------SARASAHAVMEPRVIVSEARRENEKQREYEARASIEQDAVDVEWELAHSVAVANLNNLAVLLSEQGDAEQAEAFHRRALRAREMVHGPNHPDVPILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSLEFLTRMALRRGRTFVEMEELVSRLVDAREACLTKNNAPPAIEGRRQVGSVMSDLALALRRQPKEQAKRAFPLFR 629
            +E E+  +  GDVRRVLN V++ VV RG KEAA+FCR+LK H QVKAVMW  +      + S   F    A V L+ S+HVV ++L+ E F  TAG+DYK+LEWAR LK PV T   PC+RFD +R PV++RM+AL RQDWMGLR +LPQLL A G  +EAE LLRQ  +EE+A+R LA    + + GD   A   +  A A A S+LA +L EQGKL EAEEL+R AL MR   LG +HP VGLSAS                     +M +   P  +           XXXXXXXXXX  P         + ++   S   R T  PPV +PP+ D ++DD+A PK   ++S    G     S  +       V GG   A  D                                                    +  +S   V+E  +   E R + +++ E   R S E+   D  WELAHSVAVA+LNNLAVLLSEQGDAEQAEAFHRRALRARE+VHGP+HPDVP+LLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    EFL RMAL+ G+T+ EME LV RL +AREA LT +NAPPAIEGRRQVGSVMSDLALALR+Q +EQA RAFPLFR
Sbjct: 1848 IEEEAKRYHQGDVRRVLNVVKLVVVSRGAKEAAEFCRKLKYHTQVKAVMWERLPQSPVVKTSNIGFTGIKASVELEASNHVVAVELQSEKFHSTAGMDYKALEWARALKVPVSTSG-PCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQNASEEKAVRVLAGRAGDGEDGD--LARTQSAVALASARSELAGLLHEQGKLLEAEELYRSALDMRTAALGVEHPSVGLSASXXXXXXXXXXXXXXXXXXXXXSMNITASPPSLPQQXXX----XXXXXXXXXXXPAPGRGDTVGIMVTTKATSS---RATPNPPVATPPVGDLLLDDKAAPKNSPLDSLVPAGCSPFGSSGV-------VGGGDARAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGNSSGLLVVEQEL---EIRGQQQREAEESPRTSEEKSGRD--WELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRAREVVHGPDHPDVPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFLARMALQSGKTYTEMEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSDLALALRQQKQEQATRAFPLFR 2477          
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Match: A0A6H5KHL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL0_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 4.320e-96
Identity = 290/632 (45.89%), Postives = 346/632 (54.75%), Query Frame = 0
Query:    1 MELESLEHFDGDVRRVLNAVQMSVVCRGPKEAAQFCRELKAHPQVKAVMWNGIGPEASSEGSRQAFQAGNAFVHLKGSDHVVQIQLRREMFLGTAGVDYKSLEWARGLKAPVMTGAEPCLRFDGLRMPVKERMLALVRQDWMGLRCMLPQLLEAMGKAEEAENLLRQTDAEERALRHLAESHDEDKSGDDETAEATAT---AASACAMSDLAMVLQEQGKLTEAEELFRKALAMRIEVLGPDHPCVGLSASNLAGVLRDQGRREEATAELLSTMKLPFPPTPVSSHRFLPTPPRXXXXXXXXXXXXPNASQAAAAALGSEREESIPGRPTMYPPVPSPPLADFMVDDRADPKTLMESPETIGERYASSHSLKDLAATAVVGGTLDATADALSSTGAAVAAAVTAISAGENAKTARFALASARASAHAVMEPRVIVSEARRENEKQREYEARASIEQDAVDVEWELAHSVAVANLNNLAVLLSEQGDAEQAEAFHRRALRAREMVHGPNHPDVPILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSLEFLTRMALRRGRTFVEMEELVSRLVDAREACLTKNNAPPAIEGRRQVGSVMSDLALALRRQPKEQAKRAFPLFR 629
            +E E+  +  GDVRRVLN V++ VVCRG KEAA+FCR+LK H QVKAVMW  +      + S   F    A V L+ S HVV+++L+ E F  TAG+DYK+LEWAR LK PV T ++PC+RFD +R PV++RM+AL RQDWMGLR +LPQLL A G  +EAE LLRQ  +EE+A+R +A      ++GD E  E   T    A A A S+LA +L EQGKL EAEEL+R A+ +      P+H                   +    A LLS                                            L  E EES                                                    T   GG L                                           V+E  + +    +          RAS E+   D +WELAHSVAVA+LNNLAVLLSEQGDAEQAEAFHRRALRARE+VHGP+HPDVP+LLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    EFL RMAL+ G+T+ EME LV RL +AREA LT +NAPPAIEGRRQVGSVMS+LALALR+Q +EQA RAFPLFR
Sbjct: 2458 IEEEAKRYHQGDVRRVLNVVKLVVVCRGAKEAAEFCRKLKCHTQVKAVMWERLPQSPIMKTSNFGFTGIKASVELEASKHVVEVELQSEKFHNTAGMDYKALEWARALKVPVST-SDPCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQNASEEKAVRVIA-----GRAGDGEDGELARTQSAVALASARSELAGLLHEQGKLLEAEELYRHAMTV------PEHS------------------QRPFDAVLLSF-------------------------------------------LDDEDEESNXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGNSGGLL-------------------------------------------VVEQELEIKG--QXXXXXXXXXXRASEEKSGRDRDWELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFLARMALQSGKTYTEMEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSELALALRQQKQEQATRAFPLFR 2966          
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Match: A0A6H5KEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH7_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.090e-44
Identity = 142/182 (78.02%), Postives = 155/182 (85.16%), Query Frame = 0
Query:  448 RASIEQDAVDVEWELAHSVAVANLNNLAVLLSEQGDAEQAEAFHRRALRAREMVHGPNHPDVPILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSLEFLTRMALRRGRTFVEMEELVSRLVDAREACLTKNNAPPAIEGRRQVGSVMSDLALALRRQPKEQAKRAFPLFR 629
            RAS E+   D  WELAHSVAVA+LNN+AVLLSEQGDAEQAEAFHRRALRARE+VHGP+HPDVP+LL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     FL RMAL+ G+T+ EME LV RL +AREA LT  +APPAIE    VGSVMSDLALALR+Q +EQA RAFPLFR
Sbjct:   75 RASEEKSGRD--WELAHSVAVASLNNVAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLARMALQSGKTYTEMEGLVIRLANAREARLTGCDAPPAIE----VGSVMSDLALALRQQKQEQATRAFPLFR 250          
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.760e-13
Identity = 74/238 (31.09%), Postives = 110/238 (46.22%), Query Frame = 0
Query:    9 FDGDVRRVLNAVQMSVVCRGPKEAAQFCRELKAHPQVKAV-MWNGIGPEASSEGSRQAFQAGNAFVHLKGSDHVVQIQLRREMFLGTAGVDYKSLEWARGLKAPVMTGAEPCLRFDGLRMPVKERMLALVRQDWMGLRCMLPQLLEAMGKAEEAENLLRQ----TDAEERALRHLAESHDEDKSGDDETAEATATAASACAMSDLAMVLQEQGKLTEAEELFRKALAMRIEVLGPDHP 241
            + GDVR+V +  ++SV+C  P+   +    +    Q   + + NG   +    G R      +  V+    DH+ +IQL    F       +   EWAR LK   +  AE    F  L   + E M+ L +++W G    LP+L  A G+ ++AE   RQ     D  ER          E+ +G  E+ EA      A  M+ L  VLQEQGK  EAE L+ +  A+  +VLGP+HP
Sbjct:  147 YGGDVRKVADMARISVICDNPQALKRAYLAIVESFQGDVLRVANGFNSDWMPSGYR------DVKVNPVVDDHLCEIQLHLREFFTLKSSQHAVYEWARDLKVTTIVRAENL--FGVLSREITEEMIGLAQRNWHGTGRFLPRLQLAAGQYDQAEKGFRQKLSEADNNERG---------EEDNGSTESREAPPDVIGA--MASLGSVLQEQGKYAEAEALYVRCQAIEEKVLGPEHP 365          
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Match: A0A6H5KNC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC4_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.650e-10
Identity = 68/237 (28.69%), Postives = 109/237 (45.99%), Query Frame = 0
Query:   11 GDVRRVLNAVQMSVVCRGPKEAAQFCRELKAHPQVKAVMWNGIGPEASSEG-----SRQAFQAGNAFVHLKGSDHVVQIQLRREMFLGTAGVDYKSLEWARGLKAPVMTGAEPCLRFDGLRMPVKERMLALVRQDWMGLRCMLPQLLEAMGKAEEAENLLRQTDAEERALRHLAE-SHDEDKSGDDETAEATATAASACAMSDLAMVLQEQGKLTEAEELFRKALAMRIEVLGPDHP 241
            G +R V +  + +V+C  P++ AQ    L     +K     G      S G      R  ++    FV +  ++H+ +IQL    F       ++  EW+R L+  V     P   F  +   + ERM  L R DW   +  L  LL   G  EEA  L+RQ  +    ++  A+ +H +D    D  A    TA     +S+LA VL+++G+  EA+ L+ +A+ +  + LGPDHP
Sbjct:  279 GGIRYVTDLARGTVICDTPRDVAQVFEALT----LKVGQVPGGNVLRVSNGFIRNYGRNGYRDVKMFVII--AEHICEIQLHLRPFHCLKDGQHEIYEWSRALR--VTADMRPSHLFKNMEPGMLERMTQLSRDDWCSTKRALSSLLHTAGHYEEARELMRQEVSRREMVKLEADLAHGQDSMEWDVAALVLGTA-----LSNLAGVLKKEGQFEEADSLYLRAVEIADKTLGPDHP 502          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1768.4213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3Y1_ECTSI1.460e-11249.85Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5KHL0_9PHAE4.320e-9645.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KEH7_9PHAE1.090e-4478.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXH0_ECTSI1.760e-1331.09Tetratricopeptide repeat containing protein n=1 Ta... [more]
A0A6H5KNC4_9PHAE2.650e-1028.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..178
NoneNo IPR availablePFAMPF13424TPR_12coord: 202..264
e-value: 8.0E-15
score: 54.9
NoneNo IPR availablePFAMPF13374TPR_10coord: 471..508
e-value: 1.5E-10
score: 40.6
coord: 513..550
e-value: 1.8E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 463..591
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 200..263
coord: 463..591
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 200..263
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 202..235
e-value: 1.9
score: 17.5
coord: 468..501
e-value: 23.0
score: 11.9
coord: 510..543
e-value: 56.0
score: 8.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 131..273
e-value: 2.8E-20
score: 74.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 433..627
e-value: 3.5E-30
score: 107.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 469..567
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 202..269
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 202..235
score: 8.924
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 468..543
score: 6.869

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1768contigH-paniculata_contig1768:8019..23809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1768.4213.1mRNA_H-paniculata_contig1768.4213.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1768 8019..23815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1768.4213.1 ID=prot_H-paniculata_contig1768.4213.1|Name=mRNA_H-paniculata_contig1768.4213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp
MELESLEHFDGDVRRVLNAVQMSVVCRGPKEAAQFCRELKAHPQVKAVMW
NGIGPEASSEGSRQAFQAGNAFVHLKGSDHVVQIQLRREMFLGTAGVDYK
SLEWARGLKAPVMTGAEPCLRFDGLRMPVKERMLALVRQDWMGLRCMLPQ
LLEAMGKAEEAENLLRQTDAEERALRHLAESHDEDKSGDDETAEATATAA
SACAMSDLAMVLQEQGKLTEAEELFRKALAMRIEVLGPDHPCVGLSASNL
AGVLRDQGRREEATAELLSTMKLPFPPTPVSSHRFLPTPPRRRREDASAA
SGNPNASQAAAAALGSEREESIPGRPTMYPPVPSPPLADFMVDDRADPKT
LMESPETIGERYASSHSLKDLAATAVVGGTLDATADALSSTGAAVAAAVT
AISAGENAKTARFALASARASAHAVMEPRVIVSEARRENEKQREYEARAS
IEQDAVDVEWELAHSVAVANLNNLAVLLSEQGDAEQAEAFHRRALRAREM
VHGPNHPDVPILLSNLAGTLYVQGKDSEAQPLHEKALHIREALLGSRHPD
VATSLEFLTRMALRRGRTFVEMEELVSRLVDAREACLTKNNAPPAIEGRR
QVGSVMSDLALALRRQPKEQAKRAFPLFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom