prot_H-paniculata_contig17665.4207.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17665.4207.1
Unique Nameprot_H-paniculata_contig17665.4207.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.720e-45
Identity = 89/198 (44.95%), Postives = 130/198 (65.66%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEHKRA-VKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +    H RA +  L Y++RT+DL IT+  G   G+ M  +AD+DYA+    RRSVSGG V+ G G +SW + TQ+   + T EA+YV+LA+++ EVLFLRQV+ F++P      + + EDNQ A ++A N  S+  ++HID++HH +R  V   ++ + +V +  QHAD LTKAL
Sbjct:   41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKAL 238          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 9.640e-44
Identity = 88/198 (44.44%), Postives = 127/198 (64.14%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEHKRA-VKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRP+IA+A    A++C +    H RA +  L Y++RT+DL IT+  G   G+ M  +AD+DYA+    RRSVSGG V+ GRG ISW + TQ+   + T EA+YV+LA+++ EVLFLRQV  F++P      + + EDNQ A ++A N  S+  ++H D++HH +   V   ++ + YV +  QHAD LTKAL
Sbjct:   80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKAL 277          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.280e-43
Identity = 86/198 (43.43%), Postives = 129/198 (65.15%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEH-KRAVKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +  + H K A+  L Y+ RT+ + IT++ G   G+ M  + D+DYA+    RRSVSGG V+ G G ++W + TQ+   + T EA+YVA+A+++ EVLFLRQV  F++P      + + EDNQ A ++AHN  ++  ++HID++HH +R  VE  ++ +  V T  QHAD LTKA+
Sbjct:  108 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.640e-43
Identity = 85/198 (42.93%), Postives = 130/198 (65.66%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEH-KRAVKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +  + H K A+  L Y+ RT+ + IT++ G   G+ M  + D+DYA+    RRSVSGG V+ G G ++W + TQ+   + T EA+YVA+A+++ EVLFLRQV  F++P      + + EDNQ A ++ HN  ++  ++HID++HH +R  VE  ++ + +V T+ QHAD LTKA+
Sbjct:  163 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAI 360          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.100e-43
Identity = 86/198 (43.43%), Postives = 130/198 (65.66%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEH-KRAVKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +  + H K A+  L Y+ RT+ + IT++ G   G+ M  + D+DYA+    RRSVSGG V+ G G ++W + TQ+   + T EA+YVA+A+++ EVLFLRQV  F++P      + + EDNQ A ++AHN  ++  ++HID++HH +R  VE  ++ + +V T  QHAD LTKA+
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAI 422          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 8.100e-43
Identity = 89/198 (44.95%), Postives = 128/198 (64.65%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEHKRA-VKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +    H RA +  L Y++RT+DL IT+  G   G+ M  + D+DYA+    RRSVSGG V+ G G ISW + TQ+   + T EA+YV+LA+++ EVLFLRQV  F++P      + + EDNQ A ++A N  S+  ++HID++HH +R  V   ++ + +V +  QHAD LTKAL
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.250e-43
Identity = 84/198 (42.42%), Postives = 128/198 (64.65%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEH-KRAVKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +  + H K A+  L Y+ RT+ + IT++ G   G+ M  + D+DY      RRSVSGG V+ G G ++W + TQ+   + T EA+YVA+A+++ EVLFLRQV  F++P      + + EDNQ A ++AHN  ++  ++HID +HH++R  VE  ++ + +V +  QHAD LTKA+
Sbjct:   80 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAI 277          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 9.290e-42
Identity = 89/199 (44.72%), Postives = 127/199 (63.82%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEHKRA-VKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGK-VDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +    H RA +  L Y++RT+D  IT+  G   G+ M  +AD+DYA+    RRSVSGG V+ G G ISW + TQ+   + T EA+YV+LA+++ EVLFLRQV  F++P      + + EDNQ A ++A N  S+   +HID++HH +R  V   K + + +V +  QHAD LT+AL
Sbjct:  124 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 9.970e-42
Identity = 89/198 (44.95%), Postives = 128/198 (64.65%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEHKRA-VKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +    H RA +  L Y++RT+DL IT+  G   G+ M  + D+DYA+    RRSVSGG V+ G G ISW + TQ+   + T EA+YV+LA+++ EVLFLRQV  F++P      + + EDNQ A ++A N  S+  ++HID++HH +R  V   ++ + +V +  QHAD LTKAL
Sbjct:  399 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596          
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Match: A0A6H5L3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H4_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.700e-41
Identity = 84/198 (42.42%), Postives = 128/198 (64.65%), Query Frame = 0
Query:    1 MWAATMTRPDIAHAVCTPAKFCENSGVEH-KRAVKSLQYLLRTADLRITYD-GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAVRTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAHNKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL 196
            MW AT TRPDIA+AV   A++C +  + H K A+  L Y+ RT+ + IT++ G   G+ M  + D+DYA+     RSVSGG V+ G G ++W + TQ+   + T EA+YVA A+++ EVLFLRQV  F++P      + + EDNQ A ++AHN  ++  ++HID++HH +R  VE  ++ + +V +  QHAD LTKA+
Sbjct:  200 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKGADCRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAFADVLKEVLFLRQVWRFMLPDTGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17665.4207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK6_9PHAE1.720e-4544.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD60_9PHAE9.640e-4444.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.280e-4343.43Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.640e-4342.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE2.100e-4343.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE8.100e-4344.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K8K2_9PHAE8.250e-4342.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR24_9PHAE9.290e-4244.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE9.970e-4244.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3H4_9PHAE2.700e-4142.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..186
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17665contigH-paniculata_contig17665:7..594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17665.4207.1mRNA_H-paniculata_contig17665.4207.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17665 7..594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17665.4207.1 ID=prot_H-paniculata_contig17665.4207.1|Name=mRNA_H-paniculata_contig17665.4207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MWAATMTRPDIAHAVCTPAKFCENSGVEHKRAVKSLQYLLRTADLRITYD
GQDCGIKMLAYADSDYATCQDSRRSVSGGAVLLGRGTISWHAMTQEVTAV
RTAEAKYVALAEMVDEVLFLRQVQAFIMPTLDHYPVMIKEDNQVAEKMAH
NKPSSRRTRHIDMKHHIVRGAVEAGKVDVVYVGTREQHADVLTKAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like