prot_H-paniculata_contig1763.4194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1763.4194.1
Unique Nameprot_H-paniculata_contig1763.4194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length283
Homology
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BLAST of mRNA_H-paniculata_contig1763.4194.1 vs. uniprot
Match: D8LE02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE02_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 5.890e-38
Identity = 108/231 (46.75%), Postives = 131/231 (56.71%), Query Frame = 0 
Query:    4 RARERVRDDGALVGEVASKVSGALGLDSTNRTLGRNVVIAALDAHIAEQGTANSSNNNISEGDV---------------------------------GQAQFLQAAKKYGRTLGDEMLSDIYRKITTRFKGAVVQLEIIRNEDEKARADDSDDSGDAAGADTSRLVGFGKAERLSGFGVGGGGALKGGLVKKHTFQPPAPRAQQGSRLGLDKLSAKQRADKLAALEATDEG 201
            RARERVRDD ALVGEVASKVS ALGLD  NRTLGR++VIA LD++IA    A ++    SEGD                                  G+A F  AAK YG  LGD +LSD++ K+TTR +G++VQL+ ++              G         L GFGKAERLS  G G   ALKG  VK+H FQ PAPR QQGS LGLDKL+A++ A++ AALE    G
Sbjct:    3 RARERVRDDAALVGEVASKVSAALGLDKANRTLGRSLVIAGLDSNIAAILAAAAA----SEGDADIGTDAGAXXXXXXXVGPRRGSDDDAAAELERTGEAAFRTAAKGYG-ALGDSLLSDVFGKVTTRLRGSLVQLQAMQEXXXXXXXXXXXXXG---------LAGFGKAERLSRGGAGR--ALKGVFVKRHPFQAPAPRTQQGSLLGLDKLAAQKNAERQAALEGAGLG 217
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BLAST of mRNA_H-paniculata_contig1763.4194.1 vs. uniprot
Match: A0A6H5KS63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS63_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.400e-29
Identity = 89/197 (45.18%), Postives = 110/197 (55.84%), Query Frame = 0 
Query:    4 RARERVRDDGALVGEVASKVSGALGLDSTNRTLGRNVVIAALDAHIA--------EQGTAN-------------------------SSNNNISEGD-VGQAQFLQAAKKYGRTLGDEMLSDIYRKITTRFKGAVVQLEIIRNEDEKARADDSDDSGDAAGADTSRLVGFGKAERLSGFGVGGGGALKGGLVKKHTFQ 166
            RARERVRDD ALV EVASKVS ALGLD  NRTLGRN+VIA LD++IA         +G A+                         S ++  +E +  G+A F  AAK YG  LGD +LSD++ K+TTR +G++VQL+ ++              G         L GFGKAERLS  G G   ALKGGLVK+HTFQ
Sbjct:    3 RARERVRDDAALVEEVASKVSAALGLDKANRTLGRNLVIAGLDSNIAAISAAAAASEGGADIGTDAGXXXXXXXXXXXXXXRPRRGSDDDEAAELERTGEAAFRTAAKGYG-ALGDSLLSDVFGKVTTRLRGSLVQLQAMQEXXXXXXXXXXXXXG---------LAGFGKAERLSRGGAGR--ALKGGLVKRHTFQ 187
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1763.4194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE02_ECTSI5.890e-3846.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS63_9PHAE1.400e-2945.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1763contigH-paniculata_contig1763:12863..20258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1763.4194.1mRNA_H-paniculata_contig1763.4194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1763 12761..20486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1763.4194.1 ID=prot_H-paniculata_contig1763.4194.1|Name=mRNA_H-paniculata_contig1763.4194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=283bp
MIARARERVRDDGALVGEVASKVSGALGLDSTNRTLGRNVVIAALDAHIA
EQGTANSSNNNISEGDVGQAQFLQAAKKYGRTLGDEMLSDIYRKITTRFK
GAVVQLEIIRNEDEKARADDSDDSGDAAGADTSRLVGFGKAERLSGFGVG
GGGALKGGLVKKHTFQPPAPRAQQGSRLGLDKLSAKQRADKLAALEATDE
GRSSHGNPSSRRHHTTLSFDEGRDDDGGGAGDDGWAKPKDKGGEGGGARR
GARSPASDSIACVRDQTPHPTREELTARSRAR*
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