prot_H-paniculata_contig1761.4189.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1761.4189.1
Unique Nameprot_H-paniculata_contig1761.4189.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: D7G2V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V7_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 9.150e-76
Identity = 136/209 (65.07%), Postives = 163/209 (77.99%), Query Frame = 0
Query:    3 RRTRLLSEGTTPSFAPVAPTVGDSPPSDRAEP-SRGVTAGELEELLHKKKLTEDEVMVVRQSMVQTQDRLWTSTDGS-------AGVPDRRSSASTLGS--EVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGTK 201
            RR+R  S G T S       +G      R E  +R  +  +L ++L KK+L+  EVMV+RQSMVQTQDRL+ +T+ +       AG  +R+SSA++ G+  EVVGDDSMVVGKGIMIKGDV++CATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRA+IGGRLHGTL+A TLLEVR +GKIEGMVRYN+VK+EQGG MVGD+QQGTK
Sbjct:   10 RRSRSNSGGRTGSSG----NLGVIAAKARGEQHTRSSSVVDLVDILEKKELSAAEVMVIRQSMVQTQDRLFVATNPNEVGGGTGAGSAERKSSAASAGAMGEVVGDDSMVVGKGIMIKGDVDNCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRADIGGRLHGTLSASTLLEVRASGKIEGMVRYNDVKLEQGGSMVGDIQQGTK 214          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A836C7G0_9STRA (Polymer-forming cytoskeletal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7G0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.270e-20
Identity = 44/109 (40.37%), Postives = 68/109 (62.39%), Query Frame = 0
Query:   90 TLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQ 198
            +L    V DD+M+VG GI+ +G++E CA L+V G++EG+F+G  L +  GGKY+G   V RA + G   G L  + LL+V P G +EG + Y E++  +G  + G + Q
Sbjct:   14 SLDKVTVEDDAMIVGAGIVARGELEGCAKLVVHGHYEGDFKGEELIIGMGGKYIGDVTVERAVVAGSYEGHLVVKKLLDVSPGGLVEGHITYKEMRKAEGATVNGTLHQ 122          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A3M1GD18_9BACT (Polymer-forming cytoskeletal protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1GD18_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.660e-20
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   79 AGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGTKLP 203
            A  P  R+ A     +     +++VG+GI +KG+++ C  L+VEG  E   +   L V KGG + G A+V RAEI G + GTL     L + PTG++ G +RY  + +  GG + GD+  G  LP
Sbjct:    9 ASQPGERTPAGARTGDAAPSGTLIVGQGIEVKGEIDSCRILVVEGQVEAALKAETLEVLKGGVFRGSAEVERAEIAGTVDGTLIVTGELAIAPTGRVCGTIRYGRITIHSGGEIAGDIDAGGALP 133          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: UPI00141F00CD (polymer-forming cytoskeletal protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141F00CD)

HSP 1 Score: 85.9 bits (211), Expect = 9.490e-18
Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 0
Query:   85 RSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDV 196
            +S  ++  +E   + +++VGKGI +KG++E C TL+VEG  E +     L V K G + G A V  A I G   G LT R LL +   G+++G +RY+E+ ++ GG + GDV
Sbjct:   31 KSEPASQAAEARPEGTLIVGKGIFVKGEIESCLTLVVEGRVEASLAADDLKVRKDGVFGGNAVVETASIAGEFEGDLTVRGLLTIEAGGRVKGTIRYSEIVIQSGGQIRGDV 142          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: UPI0018724465 (polymer-forming cytoskeletal protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018724465)

HSP 1 Score: 85.1 bits (209), Expect = 1.250e-17
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  100 SMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDV 196
            +++VG+GI +KG+++ C  LIVEG  E +     L V +GG Y G A V+ A I GR  G LT   LL ++  G++ G +RY ++K+E+GG + GD+
Sbjct:   21 TLIVGEGIQVKGEIQSCDKLIVEGKVEASLEAAELTVREGGVYHGKAVVKSASIDGRFDGDLTVDGLLTIQAGGRVSGALRYRDLKIERGGRLSGDI 117          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A2N3EDR5_9PROT (Cell shape determination protein CcmA n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EDR5_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 1.980e-16
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  103 VGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQ 197
            VG+G+ ++G ++ C  L++EG  +     G L + + G+  G A V  AEI G+  GTLT R  L +  TG+I G VRY E+++EQGG + G++Q
Sbjct:   80 VGRGLKLEGKIQSCDALVIEGDVQATIESGTLTISETGEVRGEATVDEAEINGKFEGTLTVRKCLTINATGRINGKVRYGELRVEQGGQISGEIQ 174          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A0U3L8W6_9BURK (Uncharacterized protein n=16 Tax=Herbaspirillum TaxID=963 RepID=A0A0U3L8W6_9BURK)

HSP 1 Score: 82.0 bits (201), Expect = 4.410e-16
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 0
Query:   73 TSTDGSAGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQG 199
            TS + +A  P   S A+   +E  G   + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q G
Sbjct:   36 TSVNKAAPYPSSVSHAAPAATEESG-SKLTVGPNIKVKGEIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVG 161          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A192ILY4_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192ILY4_9HYPH)

HSP 1 Score: 81.6 bits (200), Expect = 9.920e-16
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  101 MVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQ 198
            ++VG+GI +KG++ +CA L++EG  +         V   G + G  +V  A+I G+  GTL  R  L VR TGK++G +RY +V++E GG + G++Q+
Sbjct:   79 LLVGEGIKLKGEITNCAELVIEGAVDARVEASRFQVSNNGTFSGECNVEEADIAGQFDGTLNCRGKLIVRSTGKLKGTLRYGDVEIEGGGRVAGEIQE 176          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: J2VDA8_9BURK (Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Herbaspirillum sp. YR522 TaxID=1144342 RepID=J2VDA8_9BURK)

HSP 1 Score: 80.1 bits (196), Expect = 2.540e-15
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 0
Query:   74 STDGSAGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQ 197
            ST   + VP     A+   +E  G   + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q
Sbjct:   41 STQYPSSVPGATGGAAPASTEESG-SKLTVGPNIKVKGEIEDCDTLVVEGRVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQ 163          
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A7W8NSW2_9BURK (Cytoskeletal protein CcmA (Bactofilin family) n=4 Tax=Herbaspirillum TaxID=963 RepID=A0A7W8NSW2_9BURK)

HSP 1 Score: 79.7 bits (195), Expect = 3.410e-15
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   82 PDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQG 199
            P   S+A+  G E      + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q G
Sbjct:   45 PASASTAAPAGEEA--GSKLTVGPNIKVKGEIEDCDTLVVEGRVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYASGKVTGKIRYGKLVIEEGGQLSGDLQVG 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V7_ECTSI9.150e-7665.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7G0_9STRA1.270e-2040.37Polymer-forming cytoskeletal-domain-containing pro... [more]
A0A3M1GD18_9BACT1.660e-2036.80Polymer-forming cytoskeletal protein (Fragment) n=... [more]
UPI00141F00CD9.490e-1838.39polymer-forming cytoskeletal protein n=1 Tax=Pelag... [more]
UPI00187244651.250e-1741.24polymer-forming cytoskeletal protein n=1 Tax=Pelag... [more]
A0A2N3EDR5_9PROT1.980e-1640.00Cell shape determination protein CcmA n=1 Tax=Alph... [more]
A0A0U3L8W6_9BURK4.410e-1635.43Uncharacterized protein n=16 Tax=Herbaspirillum Ta... [more]
A0A192ILY4_9HYPH9.920e-1637.76Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
J2VDA8_9BURK2.540e-1534.68Integral membrane protein CcmA involved in cell sh... [more]
A0A7W8NSW2_9BURK3.410e-1535.59Cytoskeletal protein CcmA (Bactofilin family) n=4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 102..196
e-value: 6.4E-16
score: 58.5
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 100..198
NoneNo IPR availablePANTHERPTHR35024:SF4coord: 100..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1761contigH-paniculata_contig1761:2550..11362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1761.4189.1mRNA_H-paniculata_contig1761.4189.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1761 2441..12418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1761.4189.1 ID=prot_H-paniculata_contig1761.4189.1|Name=mRNA_H-paniculata_contig1761.4189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MPRRTRLLSEGTTPSFAPVAPTVGDSPPSDRAEPSRGVTAGELEELLHKK
KLTEDEVMVVRQSMVQTQDRLWTSTDGSAGVPDRRSSASTLGSEVVGDDS
MVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRR
AEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGT
KLPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B