mRNA_H-paniculata_contig1761.4189.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1761.4189.1
Unique NamemRNA_H-paniculata_contig1761.4189.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: D7G2V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V7_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.190e-70
Identity = 136/209 (65.07%), Postives = 163/209 (77.99%), Query Frame = 2 
Query:  116 RRTRLLSEGTTPSFAPVAPTVGDSPPSDRAEP-SRGVTAGELEELLHKKKLTEDEVMVVRQSMVQTQDRLWTSTDGS-------AGVPDRRSSASTLGS--EVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGTK 712
            RR+R  S G T S       +G      R E  +R  +  +L ++L KK+L+  EVMV+RQSMVQTQDRL+ +T+ +       AG  +R+SSA++ G+  EVVGDDSMVVGKGIMIKGDV++CATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRA+IGGRLHGTL+A TLLEVR +GKIEGMVRYN+VK+EQGG MVGD+QQGTK
Sbjct:   10 RRSRSNSGGRTGSSG----NLGVIAAKARGEQHTRSSSVVDLVDILEKKELSAAEVMVIRQSMVQTQDRLFVATNPNEVGGGTGAGSAERKSSAASAGAMGEVVGDDSMVVGKGIMIKGDVDNCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRADIGGRLHGTLSASTLLEVRASGKIEGMVRYNDVKLEQGGSMVGDIQQGTK 214
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A836C7G0_9STRA (Polymer-forming cytoskeletal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7G0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.110e-18
Identity = 44/109 (40.37%), Postives = 68/109 (62.39%), Query Frame = 2 
Query:  377 TLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQ 703
            +L    V DD+M+VG GI+ +G++E CA L+V G++EG+F+G  L +  GGKY+G   V RA + G   G L  + LL+V P G +EG + Y E++  +G  + G + Q
Sbjct:   14 SLDKVTVEDDAMIVGAGIVARGELEGCAKLVVHGHYEGDFKGEELIIGMGGKYIGDVTVERAVVAGSYEGHLVVKKLLDVSPGGLVEGHITYKEMRKAEGATVNGTLHQ 122
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A3M1GD18_9BACT (Polymer-forming cytoskeletal protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1GD18_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.530e-18
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = 2 
Query:  344 AGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGTKLP 718
            A  P  R+ A     +     +++VG+GI +KG+++ C  L+VEG  E   +   L V KGG + G A+V RAEI G + GTL     L + PTG++ G +RY  + +  GG + GD+  G  LP
Sbjct:    9 ASQPGERTPAGARTGDAAPSGTLIVGQGIEVKGEIDSCRILVVEGQVEAALKAETLEVLKGGVFRGSAEVERAEIAGTVDGTLIVTGELAIAPTGRVCGTIRYGRITIHSGGEIAGDIDAGGALP 133
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: UPI00141F00CD (polymer-forming cytoskeletal protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141F00CD)

HSP 1 Score: 85.9 bits (211), Expect = 5.010e-16
Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 2 
Query:  362 RSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDV 697
            +S  ++  +E   + +++VGKGI +KG++E C TL+VEG  E +     L V K G + G A V  A I G   G LT R LL +   G+++G +RY+E+ ++ GG + GDV
Sbjct:   31 KSEPASQAAEARPEGTLIVGKGIFVKGEIESCLTLVVEGRVEASLAADDLKVRKDGVFGGNAVVETASIAGEFEGDLTVRGLLTIEAGGRVKGTIRYSEIVIQSGGQIRGDV 142
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: UPI0018724465 (polymer-forming cytoskeletal protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018724465)

HSP 1 Score: 85.1 bits (209), Expect = 6.130e-16
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 2 
Query:  407 SMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDV 697
            +++VG+GI +KG+++ C  LIVEG  E +     L V +GG Y G A V+ A I GR  G LT   LL ++  G++ G +RY ++K+E+GG + GD+
Sbjct:   21 TLIVGEGIQVKGEIQSCDKLIVEGKVEASLEAAELTVREGGVYHGKAVVKSASIDGRFDGDLTVDGLLTIQAGGRVSGALRYRDLKIERGGRLSGDI 117
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A2N3EDR5_9PROT (Cell shape determination protein CcmA n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EDR5_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 9.690e-15
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 2 
Query:  416 VGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQ 700
            VG+G+ ++G ++ C  L++EG  +     G L + + G+  G A V  AEI G+  GTLT R  L +  TG+I G VRY E+++EQGG + G++Q
Sbjct:   80 VGRGLKLEGKIQSCDALVIEGDVQATIESGTLTISETGEVRGEATVDEAEINGKFEGTLTVRKCLTINATGRINGKVRYGELRVEQGGQISGEIQ 174
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A0U3L8W6_9BURK (Uncharacterized protein n=16 Tax=Herbaspirillum TaxID=963 RepID=A0A0U3L8W6_9BURK)

HSP 1 Score: 82.0 bits (201), Expect = 1.760e-14
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 2 
Query:  326 TSTDGSAGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQG 706
            TS + +A  P   S A+   +E  G   + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q G
Sbjct:   36 TSVNKAAPYPSSVSHAAPAATEESG-SKLTVGPNIKVKGEIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVG 161
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A192ILY4_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192ILY4_9HYPH)

HSP 1 Score: 81.6 bits (200), Expect = 3.960e-14
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 2 
Query:  410 MVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQ 703
            ++VG+GI +KG++ +CA L++EG  +         V   G + G  +V  A+I G+  GTL  R  L VR TGK++G +RY +V++E GG + G++Q+
Sbjct:   79 LLVGEGIKLKGEITNCAELVIEGAVDARVEASRFQVSNNGTFSGECNVEEADIAGQFDGTLNCRGKLIVRSTGKLKGTLRYGDVEIEGGGRVAGEIQE 176
[Close]
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: J2VDA8_9BURK (Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Herbaspirillum sp. YR522 TaxID=1144342 RepID=J2VDA8_9BURK)

HSP 1 Score: 80.1 bits (196), Expect = 8.810e-14
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 2 
Query:  329 STDGSAGVPDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQ 700
            ST   + VP     A+   +E  G   + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q
Sbjct:   41 STQYPSSVPGATGGAAPASTEESG-SKLTVGPNIKVKGEIEDCDTLVVEGRVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQ 163
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BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Match: A0A7W8NSW2_9BURK (Cytoskeletal protein CcmA (Bactofilin family) n=4 Tax=Herbaspirillum TaxID=963 RepID=A0A7W8NSW2_9BURK)

HSP 1 Score: 79.7 bits (195), Expect = 1.140e-13
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 2 
Query:  353 PDRRSSASTLGSEVVGDDSMVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRRAEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQG 706
            P   S+A+  G E      + VG  I +KG++EDC TL+VEG  +       + + + G + G A++  AEI G   G LT R  L +  +GK+ G +RY ++ +E+GG + GD+Q G
Sbjct:   45 PASASTAAPAGEEA--GSKLTVGPNIKVKGEIEDCDTLVVEGRVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYASGKVTGKIRYGKLVIEEGGQLSGDLQVG 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1761.4189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V7_ECTSI1.190e-7065.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7G0_9STRA1.110e-1840.37Polymer-forming cytoskeletal-domain-containing pro... [more]
A0A3M1GD18_9BACT1.530e-1836.80Polymer-forming cytoskeletal protein (Fragment) n=... [more]
UPI00141F00CD5.010e-1638.39polymer-forming cytoskeletal protein n=1 Tax=Pelag... [more]
UPI00187244656.130e-1641.24polymer-forming cytoskeletal protein n=1 Tax=Pelag... [more]
A0A2N3EDR5_9PROT9.690e-1540.00Cell shape determination protein CcmA n=1 Tax=Alph... [more]
A0A0U3L8W6_9BURK1.760e-1435.43Uncharacterized protein n=16 Tax=Herbaspirillum Ta... [more]
A0A192ILY4_9HYPH3.960e-1437.76Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
J2VDA8_9BURK8.810e-1434.68Integral membrane protein CcmA involved in cell sh... [more]
A0A7W8NSW2_9BURK1.140e-1335.59Cytoskeletal protein CcmA (Bactofilin family) n=4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1761contigH-paniculata_contig1761:2441..12418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score93.2
Seed ortholog evalue1.5e-16
Seed eggNOG ortholog1207063.P24_15529
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGs1N26P@1224,2JTDQ@204441,2UD9Q@28211,COG1664@1,COG1664@2
Ec32 ortholog descriptionProtein of unknown function DUF583
Ec32 orthologEc-09_004730.1
COG Functional cat.M
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
Exons5
Model size1780
Cds size615
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929379.282944-UTR-H-paniculata_contig1761:2440..25491622929379.282944-UTR-H-paniculata_contig1761:2440..2549Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1761 2441..2549 +
1691480838.0261364-UTR-H-paniculata_contig1761:2440..25491691480838.0261364-UTR-H-paniculata_contig1761:2440..2549Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1761 2441..2549 +
1622929379.3710709-UTR-H-paniculata_contig1761:11362..124181622929379.3710709-UTR-H-paniculata_contig1761:11362..12418Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1761 11363..12418 +
1691480838.0817513-UTR-H-paniculata_contig1761:11362..124181691480838.0817513-UTR-H-paniculata_contig1761:11362..12418Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1761 11363..12418 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929379.2953513-CDS-H-paniculata_contig1761:2549..26351622929379.2953513-CDS-H-paniculata_contig1761:2549..2635Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 2550..2635 +
1691480838.0386047-CDS-H-paniculata_contig1761:2549..26351691480838.0386047-CDS-H-paniculata_contig1761:2549..2635Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 2550..2635 +
1622929379.310343-CDS-H-paniculata_contig1761:2932..30441622929379.310343-CDS-H-paniculata_contig1761:2932..3044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 2933..3044 +
1691480838.0488095-CDS-H-paniculata_contig1761:2932..30441691480838.0488095-CDS-H-paniculata_contig1761:2932..3044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 2933..3044 +
1622929379.326782-CDS-H-paniculata_contig1761:7075..72281622929379.326782-CDS-H-paniculata_contig1761:7075..7228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 7076..7228 +
1691480838.059488-CDS-H-paniculata_contig1761:7075..72281691480838.059488-CDS-H-paniculata_contig1761:7075..7228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 7076..7228 +
1622929379.340975-CDS-H-paniculata_contig1761:7796..79491622929379.340975-CDS-H-paniculata_contig1761:7796..7949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 7797..7949 +
1691480838.0669038-CDS-H-paniculata_contig1761:7796..79491691480838.0669038-CDS-H-paniculata_contig1761:7796..7949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 7797..7949 +
1622929379.3577204-CDS-H-paniculata_contig1761:11251..113621622929379.3577204-CDS-H-paniculata_contig1761:11251..11362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 11252..11362 +
1691480838.0745652-CDS-H-paniculata_contig1761:11251..113621691480838.0745652-CDS-H-paniculata_contig1761:11251..11362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1761 11252..11362 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1761.4189.1prot_H-paniculata_contig1761.4189.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1761 2550..11362 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1761.4189.1

>prot_H-paniculata_contig1761.4189.1 ID=prot_H-paniculata_contig1761.4189.1|Name=mRNA_H-paniculata_contig1761.4189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MPRRTRLLSEGTTPSFAPVAPTVGDSPPSDRAEPSRGVTAGELEELLHKK
KLTEDEVMVVRQSMVQTQDRLWTSTDGSAGVPDRRSSASTLGSEVVGDDS
MVVGKGIMIKGDVEDCATLIVEGYFEGNFRGGFLAVPKGGKYVGMADVRR
AEIGGRLHGTLTARTLLEVRPTGKIEGMVRYNEVKMEQGGHMVGDVQQGT
KLPF*
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mRNA from alignment at H-paniculata_contig1761:2441..12418+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1761.4189.1 ID=mRNA_H-paniculata_contig1761.4189.1|Name=mRNA_H-paniculata_contig1761.4189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9978bp|location=Sequence derived from alignment at H-paniculata_contig1761:2441..12418+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCCGTCGTGGTCTGCACCCTTATGTTTTTATGAAAACGGGTTGAAATC
TGGCCCCGCCCATAGAACGAAGGCGCGGGCCCATCGCTCTGCAGGGCTGC
TGCGTTTGGATGCCCAGGCGCACACGGCTGCTGAGCGAAGGAACAACTCC
AAGCTTCGCTCCCGTGGCTCCCACTGTAGGCGACTCGCCCCCCAGGTACA
GGCGAGGGCACCTGTGTGGGACCTATATGTTGGCGAACTTATTCAGGCTA
GGCATGTGACTACCTGTAGCCGACACAGCTGAGCGTACGTTCTGGCTTCA
TCGGCAACAAAAAAGTCTCTCGATACCTCTCCATTCTACCCCCTGCGACT
GCTTGCCTCTGTTTTTTCCTGTGTAAGCTATAGGTACACACGGTGCTCCT
GTATGTGCGTGTGTCCTTCATCGACATCGCATACGTCATATCAGAACCTT
GACTGTCTCATGATCCTACCGTGCTGACTGTTTGCGCCGAAGCGACAGGG
CTGAGCCGAGTCGGGGTGTTACTGCTGGCGAGCTCGAGGAGTTGCTGCAT
AAAAAGAAATTGACCGAAGACGAAGTCATGGTTGTTCGACAGAGCATGGT
CCAGGTATGTGTGCGTATGTCTATGTATGTGTATGTGTGAGAGAGAAAGA
GAGTGAAGGAGAGACTTGTTCACAATTTGCTGTCATGTTTTGGACTACAG
CGGTCGCTTCGCCTCTGCTGTGATAGCGAACAACATGGTTGTGTGTACAT
ATGCACCCTGGATCAAAGCCAAAGCATTCTGTACCTAGCTGACTGGGTTG
ATACCAGCATGTGCGGGCATGGAACGTAGGCGGCTGATTTGTGAGCCTTG
CCAAAGCAAGTTCACTGTGTTCTGTTGGGGGTAAAAGTGTAGATGTTTAT
AGTTCCGCTTTGGTTCTGCGGACATCGCGGGCACCACACGGTGTGAAATA
TCATAATTACAACAGATCGTCAACCATTCGACTTTCGTCAAAGTGGTCTA
TCCGACCCTGTAGCAGGTACGATGTGCGAATATATTGAGGTATATACCGT
GCAGCTATGTTTGGAAATATACCTATGTTTTGTAACATATGACGGTAAAA
TGGCTGCGATAGTACATCAGCACAAACATTCAGTACCTACCAGTATATTA
CCTTGAATCTACAGTCAATTGGTCCGTCGTATATGCGTTCGCATCTAAAT
AGCATCTAGGGTGTAGAGCAATCAGTAGGCCTTGTTTGTGTGTTTTTTGT
GTTTTTTAACTCTCTGGCCACGACAGCCTGTCGCAATGGACCCATGCCTG
TCCCAAATTTGAAATTGAGAATAAGGTTCTGATAAGACATAATGATCGGC
AAGGTAAAATATTAAAATATTGTATTAATACAAAGAATTAGTTGATTATT
ATATCGTTTATCAATTTGTAGTGAAATGATTTATAATCATTTATATAACT
ATATATATTAAGAAAATTCACGGGGCAAGTTCTGCTTGCAAAGAATTTCG
TTATGAAGAACTCAGGGTCTGGGGTAACCGGGCTCTCTGGATTTGTATCT
ACCATCATCTAAGGAAGAGGCAGGGGCTGGAGGTCGACCTTACGTGGCTA
TATTCTCCCATCGTTCAGTACTAAGTACTCAACGAGATCGTGATTTTCAT
AATATTTGTTTAATTCTGTGATGACATAAATTCTGGAAAGGGAATCTTCA
ATTGACATCAACGGCTTTTCTGCAACACGACTGCGCCTTGGCCCAGACAG
CCGTTGCGGGTGAATTATGCGTTTTGGTTTTGCACCATGGGTGGACCCGA
GAGAATAGCACACGGTTTTTTTCTGCCACCCTGCTCCAGGCAGACCACCT
GTGTTGCAAACAGTCAAAACCGTCGAAGTATACAAAAAATTACAACGAGT
TTCAACCACTGCACCTCTACCCTGTGTTCAAACACATGAGAAAGTGTCAT
TTCCGCCCCCCGACGCTCAAGCCGTGAATACATAGACGTTGATGCCCTAA
ACTGTCGGTATATATGTCTGGCACCCATCCAAGGAGGCAGCAGCGATATT
CAATACCTTGCTAAGGCCAGTGTTAGGCCTGGAGCGGTTATTTTTTAGTG
CCATTTTTTTTTTCTTGACACCCCGGGCACGATTGCTTGCTCCAGCAACG
ACAATCGTGGATATCTTCGGCTACGCTCATGAAGAGGCTACAACAATATA
CCGACTAACTCCCACTATCTATGACTATCTGCCGTCAGCGCTGAAGATCG
CACCAAATACGGTGCGATATTCGGAGAAACACGGTTTTTGTTCCGGTGGA
TCTCCTATTTCCTCCCGTTGTCTGGTCTTCGTTTAACCTCCAACGAGCCG
GCAACTATGTGTCAGAGCTCCATGGGACACTTTGATTTGCTGCGGTTCAA
GGCCTACAGCCATTTTTATTACGATCTCAATGACGCGTTACGACTGGTAT
ACCCTGAAACAGTCGGTGTCTTGGTGAGCAAAAGAAAAAATAAGCTGACT
GTTTCAGGTTTCACTGATAATATACCGGTCGTAACGCGTTTTTGAGATCG
TAATAACTTTGGTTGTAGGCCTTGAACCACGGTTAATCAAAGTGCCCCGT
GAAACTCTGACGCCTACAGGCTGGGCCGACCAAGACACAGTTAAAACGGT
AGAATCGAGATGCTCAGCTCAACTTACCAAATTGTCCTGAAGTTTTGATA
CTTGATTTGCAACACACTCGCCGAGATATTCGAAGAAGGTCGGGTGTTTT
TTTTGCCCGCCAGGTTAAGGCCGAACGAGACACTTACATGAGTAAAAAAT
CGGCCATAACTTGGCGAAAAAATGAACAATGATCTTATTCGAACGTATCG
GCGAGGGTGTTGCAAATTACGTGTCAAATTTTCATGACAAAATTCGATAA
ATTGAGCTGAAGGGCCCCTTTTTTTACAGTGCCTTGTGCGCCGTACACAG
TTGTACTGTATGCATATCATAGATAATACTGTTTTGCGATGAGGAAAATT
GAGCTGACGCTCGCATCGAAATTCGGGCCGGCGGGTAAGATACGTTGGCG
GAAAATTGACGTTGGCAGCATGCAGTGTACAATAGGACCAACTACGGCAT
GTTTTCGTTCGATGCTGGGATAAAAGAGTCCTTGTACCATTTCTGGTACA
GTCGGCGTCAATGGTCACGTCGAACTCGTATTGTTGCCCCCGTTCACGTC
GGGTCGAATTTCTCTGCGCCTGCTTAATGACGCAAACACGTCAGATTCCA
ATGTTGCCGTCGAAATTGCCGGAAGGATCTGGGCGCCAGACGGCGCAGAT
GAATATCACTTTCGGAACGTAATTCTTGTGCTGTACTCGCGAAACTCGCG
CTGCAGACGGTCTGGAGGCTGCACGAGAGTCATACAGCTCTTGGCGAGGT
ACTGAGATGTGTGACGATAGGGGGGGCGCTTTGTCCGCCGCCGGGCGCAG
CGCAGCCACTCAAAATGGAGCCGAAAAGGGTCTTTTTTTAGTTCCACTAC
TCGCGAATGTTTCGGAATTGTTTCGGAACAATATGCACGAACGAATGAAC
TATTCTTGAAGTTTACGTCCATAGCTTTAATTCAAGCTATACATGACCGC
AAAAACCTTCGTATTCGTAGAGAAAAGACCTACAAAAGATGTGAGAAATC
ATAACGTCACAGAATTATGGGACGGAGGGAGCATGAAATGAACTCTAAAT
TGTACAGTCAATATTTATCGCGTTATCCGTACAGTGTCCGATCTTCTACC
AATGCACCACACATTCAATCTCAGCTTCAATTGATACGTCCCCTTGGTCT
TGTCGTGCACAATCGTAGGGACTGATGCCCTCTACCATTGCTGACCTACT
GGCACGCTCGTAGCCATGTCGCGGCGCGTAGGCTTTGGGGTATCCCTGAT
CTGGGCACGTTTGTGCAACACGATTCTAATTGCGTCGCAAAAACAATCGC
TTACAATATCAACTTCCTTACACGCTGGTTGGGCAGCTAACCTCAAATTT
GTAAAACCAACTTCATTGGGCTAGGCACGTGGCTCTGCACATGTGCATTC
ATTGGCTGATTGCAAACAATGTTTTATTGTTGTGATGAATCACAGTAGTT
GAGAAGATATGATAATCGGAAACAATATGGGTTTCTTGGTCGGCTTAGTC
TGTAGCTACTGGCTTGTGGTGATCTGAACAAAACTCGTGCTTCTCCATAC
ATGGCACTATAATCGCTCCCCACATGTATGAACTTCAGCGCTGACGGTAG
ATTGTCAAAGTGGAAGTTAACCTATGCACTTGCGTAGCCCCTGCACGAAT
GTAGGGTGAGATATCCACGATTGTTACTCCGAAGAAGAGGTTGGAAAATG
ACTGAGATTGGATAACTTGTGCATTTGTTTTGCTCAGTTTTACTGTAAAT
ACGCTTTGGCGACCTTTGCTCTTGTAGGGCCGTTCTAAACGAAGCCGATC
TTGGTCCGGTCTTCGCCATTCTTCCGTCTTCCGAAAATTGGACATCGCGA
TAGCGAGCTCAAAATTGAGACGAACGTGCGAAAACATTGTACACCGAACA
CGAACAGGACTGAACACCAATATCTTCGTTGAATTGACGAATATCATTTT
TTTTGTTTTTGTTGCTATGTTCGTTCGATCGACAGACACAGGACAGGCTG
TGGACCTCCACGGACGGGTCGGCGGGCGTACCGGACAGAAGAAGCTCCGC
GTCTACCCTGGGGTCGGAAGTGGTTGGGGACGACAGCATGGTGGTCGGCA
AAGGCATCATGATAAAGGGAGACGTCGAAGACTGTGCGGTAAGCAAGCGG
TGTAGGACCACCGTTTTGTGCTGTTTCGAGCGTATTTTCATAAAGGTCCG
CGAAATCGGGTTTATCATGTTGTTTCTTTGGTTATGGCCGAGCAAGGAAG
GATCCTCTTGACTCGCCAATATGTGACCATTTCTGTTGTTGGTATCGGGC
TAATTTGAATCGGAAGACTGCAGTCAACCGGAGATTCTTTTTTTTTTTTT
AAACCCTCTGAAGGCTGAGGCAAAAACCTGTACCGATACTTCCATACTTG
AGTATTTTACCAGAGTATCTCTATATTTACTTCAACAGAACAGAGTTATT
TATTCCTTGGAGATTCAGATTTACGCAAAGGGAGATCGTGTTTTTTTTAG
GAATATTTTTCGATATCGTTTTGTTCATTTATTGATTTCCCGCCCCCCCA
CAAAATCACTCCATTGTGCCTTTGTGTATCTTCCTAAGCACATCGCGGGT
ACTGTTGTTCCTTTGACGAATAAGGATTTCCGTGTTTCTTCTCCTTTTCC
CATTAACTTTACTTGTGTTGCCCTATCCCAAAACACGAACCTATGGGATG
CCCAAGACTCTGATAGTGGAGGGGTACTTTGAGGGGAATTTTCGCGGAGG
TTTCCTCGCAGTACCGAAGGGTGGCAAGTATGTGGGGATGGCAGACGTGC
GAAGAGCTGAGATTGGCGGGCGTTTGCATGGGACTCTGACCGCCCGCACT
CTCCTTGAGGTAAGGTAGCTTGATTTTTTTTTTTTTTTCCCCGCCGTAGC
ACCGCAGTGTGCAGTGTATATATCCACCATTTTAGATCGCCATACAATCG
CGGTCGTGATGTTTGTGTGAGAGCAATTGGATATGTCGAGGGTAATCTCT
AGAAGTGGTATTGTTATTGCCGGTTTTTTGTTATGCTGTAGCAACCACAA
ACAAAACTGTTACCTCTCACATTTAAAATAATTCACGTGTGTTTTCGGTC
TACGTGAAGGATGAGTAGCCAACCGGGCAGGCAATCCTCGGCGCAATGAG
TGGCGTTTCGGGGTAACTTGTTCGGTTTTTTTAATAATTTGTTCCGGTTC
GGAAAAATAAGGTTTTCTTTTTCACCAAGGTGTTGCTTTTTTTGCGCATG
TAGGCTAAGTCCACTAAGACATTGAGAATGTCTTGGACTAGAAATTCCAT
TTAGTTTTGAAACTTTTCACTGGTGCCGTCGAATTGTTTTGGATATGTTG
ACATTTTCATGATTTTCCGGTTTAGAAATCCGTCGATATTACGACGAAGA
AAAAGATAACTCGCCGGTATTATGAGGGGAAAGTTTTGTATTCACGATGG
GCTCCTCTCCTAAAAATTTCGAGTCGATATTTTCAAAACTTCATGGGATA
TTCCAGGCAGAGGCGTCCGGTGTTTCCGGGTTGTTTTCGGGTTGTTTTAT
AGGGTGATTCGATCTAAGCATGATATATATATATAATCTATAAACATCCA
CAAAGCAGGAAGGAAAACAAGAAATATGTGAATATTTCGTCAACATATTT
GTAAAACCAATGCGCTCATCTCCTCAGGTAGTTCGGTGAGAAACGAAATG
GAACGGGATTGGCCCGTTGAAGGTATCATCACTGGCGATGCCCAAATTCC
ATGAATTTTTGCAGGTGTTTCCTTCATTTTTGCTTTGGTCATCGCTTTTG
AACGACAATAAGTAGGGAGACAAAATAAGGATCATGATTCTCCGCGCTGT
GTCAATAAAATGCACAGGGAATTTCAGGACAATCGGATGTGGGACTTCGT
TATCTTGAAATTTGGACCAAGATATCATCCCCAAGCAGGCCGTAGATAGT
CATGACACAGGATGAAATATTGAAAGTACCCGAGTGGCCGATCTGAGCAT
GTGGTGCAGTGCTTACGCCGTTGCAGGGAATCCCATGATTGCATTGCGGC
GAACGCATCTAGATTCATGCGTTTGGGGATCTCGGCCAGCGGATTATGAA
ACGTATTGGACGTGTGTGAGTAGATCATGGCGATGTTTTCATGACGAGCA
CGTGCGTATTTAATCTACAGTGACGTGATGTTTTACTCCTTACTCTGGCG
ACACTTTAGAGATCTGTACTGCAGAATCAAAACCATGTTGTATATTAAGT
CAACTGAAACAGGGCAGCCCATGGTTGATTGATTTGGGTAATGACACCAT
GGAGGATGACACCTCCTCGCGGTAAAGGGTTAATTGACGGATTTTACCCT
TTGCGCGCCGATCTCCACAGGATTCTCACCTAATATGCCGACTTGAAAAG
ATAGGCTATGAAATATTCGTGGGCATAAAAAAGTTATCGCTGTTCTGACA
AACAGCCCAATACAGACGCTGGATACAGCACAGATACGTCAGATTATTGT
TTTTGTTCTGAACGAGCCTCTTAAAGGGCGTCCGAAGAGTTTAGCTAATT
TTTCTTGCAAGCAGGTATGTTTATTCACGATGACAACTGAGATTTTGCTG
TTTGAAAGATCTCGTCCAGAGTCATTAGATAAAACGTGATGCGTCGTTAG
GTAGACAGGAGGTTACCTGTGTTACTAAACCAATAGATGAGGTCGATATT
GATGGAGAGATGCAACCAAATGCCACACGCAAAACGTGATGGACCGCCTA
TTATTCTCATTGATAATTTACTGTATGTACCACCAACACTCCAAACATTA
AGATCCAAAATTCTGCACAAGGCAGGTACGTACCCCACACCTGCTGCAAC
TGAACTGGCCAAGCAACAGCCCATTTTGGTGGTCACAGAACGCTGGTTTT
TCGTTTTGTTACAAAGATAATAACATGTATGCGGTACATGCAAAAAAAAA
CAGACGCAGCAGTGAAGACATCGACAAATATGCGGTACTGCACAAAATTC
AAAAACGAATTCAGTCGTTTGAACTGTATATGTGGACTGCATTGTCGCAA
AAACAGCAAAACATCCCCAAATATCCCCGCATGTTGCAGCACAAGGCGGC
AACCTTCACGTTCCTCCTGACTTGATTTCTTGATATCCAAAATTCTGCGT
TATCCTGACTTTGCATATAAGTGAAGCTATCTGTCGGCGCCATTATCACG
CGTGTTGATCAACTGTGGAACACTGGCAATTGGGCAAAGGAAGCTCGACC
GAGAGCAAAAGTTGTCATGGAGTTGAAGCGTGAAGTTTGCGGTACGGGTA
CTGCAGACCGAAAATTCTTCCCCCTGAGCCAAACTGCGCCCACGACTGTC
GCTCATCAGGCCAGAATGACACCTATTCATGTCCCTATCGTCGTTGGCGG
CAGTCCAATGGGCTGGCTGACTGTAGGAGCGCTTCACACCACTCCACAAA
ACACTACAAAAACGACGTCGATGGTTGACCCAGACCTGTGGATAACGACT
TGACGGCATATTTCCTGTCCCTCCATAGCTAAAAAACCTTCGATTTTGGT
TGAATCTTTTTCAGTTTTGTGTTGGTTGAAACACAAGTGAGGTGTCATTA
GATATGGGTGGTTTGTCAGATAGAAATGATGTGTCACCAGGTATGCGTGA
TGTGTCACTAGATATGCGTGACGTGTCATTAGATATGCGTGATCCATCAT
TAGATATACGTGATTTTGCATCCGACAGACGTGGTTCTCTCTGCAATAAT
CGCTCTTGCTTCTCGACAAAATCAAAACTGCAAAAACAGATTATCCGGGG
GTGGTGTTCAACGTAGTATGCCCTGATGAAGTGTGACAATCAAGGTCCTT
TCACACTTCTAGTTGGAGCTTCTTAGGGTTTTGACAAATAGTCTGCGTGT
CAGCCTGCTGTGTATGCTCTTGATCCAGACAGAGCTCGCTGCGCTCGTTC
GCAAAAATTATATCCAGGATGTCCATGAACGTTCGTTTTACAGGAGTCAC
TTGACTACAGCATCAAACATATGTTCTGAAATGATGGTAATCTTACCGTA
ATTCATAAGTAGAGATCCTTGTTAGGTTTTGCCTGATGGTGTACTGGATT
TACTATAAAAACCTATTCTGAAATAAACATGCGCGCTTTATTTTGTCATC
TGTTTTTCAAGGTTCGTCCAACCGGCAAGATTGAGGGTATGGTACGCTAT
AACGAGGTCAAGATGGAACAGGGTGGCCACATGGTGGGCGATGTGCAGCA
GGGCACCAAGCTTCCTTTCTAAGAATACGATTACTTCAGAATAATTTTTT
GAGAGCTACATGTTCCAAGCGTTAGTTTTTGAGAGAATACTTCCGGGAAT
AAATTCTGCGAATAGGAGGTGTTTGGGATTTGTTTCTGGTGTTGTACAGA
GTTTTTTGCGATAATCACCTAGCGGCCGTGCCCCATCCTCCCACCACGGC
ATTACCCTTGTCATGCTAGGCTGCACAAACCGTCGTTTGTGCGAAGTTTG
TTTTGTGATCGAGTTAGCCAATAAACGCACGAGTTGATCCACGTAGACGC
ACGTGGCCCCCCGCTGCACGCGGAATCCTGCCAAGGTACAGTCCTAATAC
CGGCAGGGGGATCAAACAGTTGAATCGTGTGGGTAGACGTACATCGCACG
AGTAGTACGCGAACTTCGATATTTTTTCCGTAAAAAATAATCAGATTTTT
AAGGCGTTCTAGTGCGCCAAAACGTTAGGACACTGCGTACTCAGTTGTCC
TTGCTAATCGCGGTATATCTGGCGAAGGTACGTGGGTAGGTGAGGTGCTT
ATAGCTGACTGCGGCCCTGCATCTGTCTCGCTACGTACACAGTATACTAG
AGAAGGCGTGACGACGCCTTGTGTTTGAATGTCTATAGCTCCGGGCTAAA
GGGCGGTTTACGAAGTGCATAGTGCTGCGCTAGGTAAGTAGGGGGTTGGA
GCATGTGTTCAGGGTGTGATCCCGATTTCGTGGTGACGAGGGTACTAGAT
CGAATGTCCTTAATATTATACTGAATACAGCCATGATGATGACGTACGGA
GATATGCCATTCTCCGAGTGTTTTTTGCCAAGTGTTACGTGATGCGGAAC
ATGGAAAAATGTGTACTAGAGGTCGGAAATCGGGGCTTGGTACTTGTTAT
CTTGCCGTGGGCTTAAGCTCCTCCCTTCACAACGCTTCTGAGTGGTGCAT
ACGGAGGGTGCACACTCTGGGGTGGAAAGGAAAGTGTGTACTAGATGTTT
AGGATGGCTTTTTTCTCGAAGATGAAAAGAGTTCAATTATAGCCTGCGCA
AGATATCCCATCCCCAAAACCTGATGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig1761:2441..12418+

>mRNA_H-paniculata_contig1761.4189.1 ID=mRNA_H-paniculata_contig1761.4189.1|Name=mRNA_H-paniculata_contig1761.4189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig1761:2441..12418+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAGGCGCACACGGCTGCTGAGCGAAGGAACAACTCCAAGCTTCGC
TCCCGTGGCTCCCACTGTAGGCGACTCGCCCCCCAGATGCCCAGGCGCAC
ACGGCTGCTGAGCGAAGGAACAACTCCAAGCTTCGCTCCCGTGGCTCCCA
CTGTAGGCGACTCGCCCCCCAGCGACAGGGCTGAGCCGAGTCGGGGTGTT
ACTGCTGGCGAGCTCGAGGAGTTGCTGCATAAAAAGAAATTGACCGAAGA
CGAAGTCATGGTTGTTCGACAGAGCATGGTCCAGCGACAGGGCTGAGCCG
AGTCGGGGTGTTACTGCTGGCGAGCTCGAGGAGTTGCTGCATAAAAAGAA
ATTGACCGAAGACGAAGTCATGGTTGTTCGACAGAGCATGGTCCAGACAC
AGGACAGGCTGTGGACCTCCACGGACGGGTCGGCGGGCGTACCGGACAGA
AGAAGCTCCGCGTCTACCCTGGGGTCGGAAGTGGTTGGGGACGACAGCAT
GGTGGTCGGCAAAGGCATCATGATAAAGGGAGACGTCGAAGACTGTGCGA
CACAGGACAGGCTGTGGACCTCCACGGACGGGTCGGCGGGCGTACCGGAC
AGAAGAAGCTCCGCGTCTACCCTGGGGTCGGAAGTGGTTGGGGACGACAG
CATGGTGGTCGGCAAAGGCATCATGATAAAGGGAGACGTCGAAGACTGTG
CGACTCTGATAGTGGAGGGGTACTTTGAGGGGAATTTTCGCGGAGGTTTC
CTCGCAGTACCGAAGGGTGGCAAGTATGTGGGGATGGCAGACGTGCGAAG
AGCTGAGATTGGCGGGCGTTTGCATGGGACTCTGACCGCCCGCACTCTCC
TTGAGACTCTGATAGTGGAGGGGTACTTTGAGGGGAATTTTCGCGGAGGT
TTCCTCGCAGTACCGAAGGGTGGCAAGTATGTGGGGATGGCAGACGTGCG
AAGAGCTGAGATTGGCGGGCGTTTGCATGGGACTCTGACCGCCCGCACTC
TCCTTGAGGTTCGTCCAACCGGCAAGATTGAGGGTATGGTACGCTATAAC
GAGGTCAAGATGGAACAGGGTGGCCACATGGTGGGCGATGTGCAGCAGGG
CACCAAGCTTCCTTTCTAAGTTCGTCCAACCGGCAAGATTGAGGGTATGG
TACGCTATAACGAGGTCAAGATGGAACAGGGTGGCCACATGGTGGGCGAT
GTGCAGCAGGGCACCAAGCTTCCTTTCTAA
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