prot_H-paniculata_contig17601.4188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17601.4188.1
Unique Nameprot_H-paniculata_contig17601.4188.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length374
Homology
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BLAST of mRNA_H-paniculata_contig17601.4188.1 vs. uniprot
Match: A0A6H5JZ11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ11_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.340e-11
Identity = 60/198 (30.30%), Postives = 97/198 (48.99%), Query Frame = 0 
Query:  120 FTDAGDAVLSSSVDRDSDLSWKVLKEGRTLVALVPQLSRLQPVTDDLAAACRENTRTGLWSTMQSADKSQKMVGSKLLPINVPESNV------RHSVHEEMASRQDRADGSPARQVAMMAAAVKGLEIKESDIHGVGLFAINDMDAGAFVDICCFGTFEVYDSVQEVHDALADGVPRYMV--TADVASLCVAGEVSRP 309
            F  AGD+VL ++ D ++ ++  VL  GRTL ALV  +S+   V   + AAC +  R G ++ +    K+  ++    LP  VPE+N+      RH   +E+A      + +     A + A    +EI+ S IHG+GLFA++D+     + I   G FE +         L D VPR+ +   +D + +      SRP
Sbjct:    6 FAVAGDSVLVTAFD-ENPIAPLVLGNGRTLCALVADMSKKDDVDKAVDAACTDAMRHGWFAELC---KANVIISGSTLPSIVPENNLSNEAVPRHLEGQELAGPDVETEETSCLYSARVFADEFHVEIEPSSIHGLGLFAVHDLPKDEAMPIPLMGDFEFHTPEGAFGMMLDDKVPRHPLLDASDFSVVIWTQRKSRP 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17601.4188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZ11_9PHAE1.340e-1130.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17601contigH-paniculata_contig17601:2963..5360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17601.4188.1mRNA_H-paniculata_contig17601.4188.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17601 2931..5405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17601.4188.1 ID=prot_H-paniculata_contig17601.4188.1|Name=mRNA_H-paniculata_contig17601.4188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=374bp
MLCDSSHLRALLKEAGLIMESVPLVSHYGNGNAGRKKKKQKLMLRNQGSI
ILTAHKGDVLICNGGTGSRSTPSAARASRRNAVGFPADTAFNAGAVVSQQ
HPPKGTYITENAAEVLIRRFTDAGDAVLSSSVDRDSDLSWKVLKEGRTLV
ALVPQLSRLQPVTDDLAAACRENTRTGLWSTMQSADKSQKMVGSKLLPIN
VPESNVRHSVHEEMASRQDRADGSPARQVAMMAAAVKGLEIKESDIHGVG
LFAINDMDAGAFVDICCFGTFEVYDSVQEVHDALADGVPRYMVTADVASL
CVAGEVSRPNAALFLVPLPCNFLWYMNSCGAEPDKTNVVGKTMFEPKNWI
LTRDRRMKGVVVEEPGKDPCGKH*
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