mRNA_H-paniculata_contig1757.4174.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1757.4174.1
Unique NamemRNA_H-paniculata_contig1757.4174.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A6H5L8G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G6_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 2.350e-126
Identity = 201/269 (74.72%), Postives = 224/269 (83.27%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREG-KADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMGADSSMSNTAPDIASLVDGLR 804
            G +AFLLG+GATIVGY  YGG SFG+TEFLKRRFVELAGP LAALYPIPILLGASA+SAC A  AVTPFETLRIKTVTVPNFP+TL GA+SE+   GRA +L  G+P+LLLAEIPFMMAKFAVFDA SKLAY +FP A+ESV ASLA+SL+SGMVAG  ASFVSQPSDT+ VEV+D+EG    I++TVK +Y + G A FYKGA PRA KSALNIALQFFLYDSLKR+ANV PDDLKVFFDVMSGLEMGA S     A DIA  +D  R
Sbjct:  225 GVEAFLLGTGATIVGYVFYGGFSFGLTEFLKRRFVELAGPDLAALYPIPILLGASAISACFAATAVTPFETLRIKTVTVPNFPKTLAGAMSEMVSTGRAGDLVAGVPVLLLAEIPFMMAKFAVFDAFSKLAYNVFPQANESVAASLAISLISGMVAGVAASFVSQPSDTVFVEVSDKEGGSVGIIETVKQVYKEGGAAAFYKGALPRAAKSALNIALQFFLYDSLKRLANVAPDDLKVFFDVMSGLEMGAKS-----AADIAPTIDSGR 488
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: D7G8I8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I8_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.760e-122
Identity = 201/269 (74.72%), Postives = 223/269 (82.90%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREG-KADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMGADSSMSNTAPDIASLVDGLR 804
            G +AFLLG+GATIVGY  YGG SFG+TEFLKRRFVELAGP LAALYPIPILLGASAVSAC A  AVTPFETLRIKTVTVPNFP+TL GA+SE+   GRA +L  G+P+LLLAEIPFMMAKFAVFDA SKLAY +FP A+ESV ASLA+SL+SGMVAG  AS VSQPSDT+ VEV+D+EG    I++TVK +YN+ G A FYKGA PRA KSALNIALQFFLYDSLKR+ANV PDDLKVFFDVMSGLEMG  S     A DIA  +D  R
Sbjct:  570 GVEAFLLGTGATIVGYVFYGGFSFGLTEFLKRRFVELAGPDLAALYPIPILLGASAVSACFAATAVTPFETLRIKTVTVPNFPKTLAGAMSEMVSTGRAGDLIAGVPVLLLAEIPFMMAKFAVFDAFSKLAYNVFPQANESVAASLAISLISGMVAGVAASLVSQPSDTVFVEVSDKEGGSVGIIETVKQVYNEGGAAAFYKGALPRAAKSALNIALQFFLYDSLKRLANVAPDDLKVFFDVMSGLEMGGKS-----AADIAPTIDSFR 833
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A836CG87_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG87_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.560e-102
Identity = 168/251 (66.93%), Postives = 203/251 (80.88%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVN---DREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMG 744
            G  AFLLG+GATI GYF+YGG+SFG+TEF KR+FVE+ GP  A LYP+P+LL ASA++A  A  AVTPFE+LRIK VT P FPRTL+G + E+A +G+  ELFDG+P+LLLAEIP+MMAKFAVFDA SKLAY +FP A ESV  SL VSL+SGMVAG  AS VSQPSDTI+V VN   +  G+ DI+ TV+    + G A FYKG+ PRA+KSA+NIA+QFFLYDS KR+A+VGPDD+KVFFDVMSGLE+G
Sbjct:  546 GKDAFLLGAGATITGYFVYGGVSFGLTEFFKRKFVEICGPEFATLYPVPLLLFASAMAATFAATAVTPFESLRIKAVTSPGFPRTLIGGLQEVARRGQTRELFDGVPVLLLAEIPYMMAKFAVFDAASKLAYSLFPQAGESVTLSLLVSLLSGMVAGVAASLVSQPSDTILVAVNGEAEEGGRMDIVGTVRNKLKEGGVAAFYKGSVPRAIKSAINIAIQFFLYDSCKRLAHVGPDDIKVFFDVMSGLEIG 796
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A4D9D8H6_9STRA (EF-hand domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8H6_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.620e-46
Identity = 126/354 (35.59%), Postives = 160/354 (45.20%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTV-------------PNF--------------------------------------------------------------------------------------------PRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVND---REGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLE 738
            G  A LLG+G T++GY +YG ++FG+TE+LKR F++LAGP  A  YP  ILL AS  +A     AVTPFE LRI++VT              P+F                                                                                            P  ++  V ++  +G   EL+ G+   ++ EIPFMMAKFAVFDAVSK  Y ++P ASESVG S              A+ VSQP DT+  +V           I   +K +Y+     GF+KG FPRAVKSA NIALQFFLYD  KR  +V  DDLK+FFDVMSGLE
Sbjct:  685 GPTALLLGAGPTVLGYLVYGAVTFGLTEYLKRVFLDLAGPENATFYPFAILLLASMSAAFFGAVAVTPFEALRIRSVTSSEDVAGGEDEMKGPSFRLESNQSATALEDSTSVEGESDPAASPPGPTAEKATTSVEESSGVKQPVSVLASTGVNGIQGNGAGPKKTIEHGEGSDTGVAGVAVLSAESPPGNMMATVGQMLKEGTLGELYAGLGPAVVGEIPFMMAKFAVFDAVSKAIYAVYPSASESVGLSXXXXXXXXXXXXXAAAIVSQPFDTLTTKVTQYTQMRRSGGIFVAIKDVYSKGSFGGFFKGTFPRAVKSAANIALQFFLYDFSKRGLHVSADDLKLFFDVMSGLE 1038
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A7S2JYN6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYN6_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.240e-43
Identity = 90/244 (36.89%), Postives = 137/244 (56.15%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSG 732
            G  AF  G   T  GYF +GG ++ + E ++R  ++L GP    L  +PI++ AS+VSAC     + PFE +RI++V  P+F   +VG    +        LF  +P+ LL E+PF +AKF VFD VS   Y  FP A E +  SL V+LVSG + G CA+ VS P+D  + E+         ++T K +  + G    ++G   R    +  +++QFFLYDS++ +  +G DDLK++ DV+ G
Sbjct:  266 GFGAFFTGWVPTFAGYFAWGGAAYTIIEIVRRNLIDLLGPAAIPL-EVPIIVLASSVSACAGSVIICPFEAVRIRSVAQPDFADNIVGVYQRMVKDEGFKSLFAAVPVFLLKEVPFAIAKFTVFDLVSAKLYNEFPVAQEDIRLSLYVTLVSGTLGGICAAIVSNPADRTISEMKKASSDVGPIETGKKIVEEGGIPKLFEGLTLRLFFYSFLVSIQFFLYDSVRLLLEIGTDDLKLYLDVLGG 508
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A7S1YME9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YME9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.030e-39
Identity = 83/245 (33.88%), Postives = 142/245 (57.96%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRF---VELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVM 726
            G +AF+ G   T +G+FL+GG S+ +TEF +R     +  +G G++    +PI+LG++A++A      ++PFE++RI++V  P+F  ++ G ++ +  +     LF  +P+ +  EIPF MAKF VFD  +   Y  FP A E +  SL VS+  G++ G  A+ VS P+D  + E+   +     ++  K + +  G  G +KG   R    +L ++LQF +YDS++    +G DDLK++ DV+
Sbjct:   86 GLKAFVTGWEPTFLGFFLWGGTSYTLTEFFRRLLTSSLSSSGGGVSPSLEVPIILGSAAIAAVFGSCIISPFESVRIRSVAKPDFADSIFGVLTRMVSEEGVISLFSIVPVFMSKEIPFAMAKFTVFDLSTDFMYETFPAAREDLQLSLLVSVAGGILGGITAAIVSNPADATISEMKKAKTDMGPVEAAKVILDRAGIPGLFKGLGLRIFFYSLLVSLQFLVYDSVRFALGIGADDLKLYLDVL 330
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A448Z8G6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8G6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.280e-37
Identity = 91/248 (36.69%), Postives = 137/248 (55.24%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMG 744
            GA  F  G   T VG+F +GG S+ +TEF++R  +  +GP  A L  I I+L +++V++      + PFE++RI++V  P+F + +    S +  +  A  LF   P LLL E+PF MAKF++F AV++  Y  FP A E +  SL VSLV G+  GA A+ +S P+D  + E+         LD  K +    G A   +G   R     L ++ QF +YD+++    VG DDLKV+ DV+ G   G
Sbjct:  803 GATGFFNGWIPTFVGFFFWGGFSYSLTEFIRRSLLISSGPQAANL-EIQIVLVSASVASFFGTFILVPFESVRIRSVAQPDFGKNIFDVTSRMVKEEGAWSLFSAAPPLLLKEVPFAMAKFSIFTAVTQYLYQEFPVAQEDIQLSLLVSLVGGIFGGAMAAIISNPADATISEMKKSVSDMSPLDAAKTVIERGGYANLMRGLPIRMCFYPLVVSFQFLIYDAIRIYLGVGADDLKVYLDVLGGALQG 1049
[Close]
BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A1E7FNF7_9STRA (Mitochondrial carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNF7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.490e-36
Identity = 87/248 (35.08%), Postives = 128/248 (51.61%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMG 744
            G   F  G   T VG+F +GG S+ +TE ++R  +   G     L  I I+L +SAV+A      + PFE++RI++V  P + +      S +  +     LF   P  L+ E+PF MAKF VF AV++  Y  FP A E +  SL VSLV G+  GA A+ VS P+D  + E+         +D  K L +  G A   +G   R     + ++ QF +YD+++    VG DDLKV+ DV+ G   G
Sbjct:   82 GLGGFFTGWVPTFVGFFFWGGFSYSLTELIRRYLIIYFGTQAQNL-EIQIILLSSAVAAFFGSFVLVPFESVRIRSVAQPGYGKNFFDVTSRIVNEEGIESLFSAAPAFLVKEVPFAMAKFTVFTAVTRYLYEAFPAAQEDIQLSLLVSLVGGIFGGALAAVVSNPADATISEMKRSVSDMTPVDAAKSLIDKGGYANLMRGLPMRIALYPIVVSTQFLIYDAIRIYLGVGADDLKVYLDVLGGALQG 328
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BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A7J7ISG7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISG7_9RHOD)

HSP 1 Score: 138 bits (348), Expect = 6.460e-35
Identity = 96/263 (36.50%), Postives = 135/263 (51.33%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVG-----ASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMGADSSMSNTAP 774
            GA A L G   T VGYFL G   FG+ E+ KR +  LAGP  A      I L A   +   A  A+ P E  RI+ V+ P+F  +L  A S+L  Q     L+ G+  +LL +IP+ MAKFAVF+  S+L Y     A +S         L +SL SG+ AG CA+ VSQP+DT++  +N  +    + +    +  + GT G ++G   RA+      A QFF+YD LK++  V P   K    +++       SS S TAP
Sbjct:  123 GALALLTGLSPTAVGYFLQGWFKFGLYEYFKRLYGGLAGPERAEKARFGIWLAAGGTAEFFADLALCPLEATRIRLVSQPSFANSLPEAFSKLLTQEGFRGLYAGLFPILLKQIPYTMAKFAVFETASELIYQALESAGKSKADLRDSTKLLISLNSGIFAGICAAIVSQPADTVLSVINKTKVTGSVAEATLRIIRELGTRGLFRGLGARAIMVGSLTAGQFFIYDGLKQLLGVAPVHKKEQMPLVTATA----SSSSVTAP 381
[Close]
BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Match: A0A8J4VA13_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4VA13_9MYCE)

HSP 1 Score: 134 bits (336), Expect = 6.090e-34
Identity = 86/238 (36.13%), Postives = 127/238 (53.36%), Query Frame = 1 
Query:    1 GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPILLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRASELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIF-----PFASESVGASLAVSLVSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFYKGAFPRAVKSALNIALQFFLYDSLKRIANV-GP 696
            GA   L G G T VGY L G   FG  E  K+ + +  GP  AA Y IPI L ASA +  +A  A+ P E  RI+ V  P+F ++ V A  ++  Q   S L+ G+P +LL ++P+ MAKFAVF+  ++  Y        P  S + G  L+VSL SG+V+G  A+ VSQP+DT++ ++N  +    +   +  +    G +G + G   R        A QFF+YD +K +  + GP
Sbjct:   60 GAGMLLQGLGPTAVGYALQGFFKFGFYEVFKKSYGDFVGPENAAAYRIPIWLAASATAETIADIALCPNEACRIRLVAEPSFAKSPVEAFGKIVKQEGLSGLYKGLPPILLKQVPYTMAKFAVFEFTAEKVYQYLAANGTPKESMTDGQKLSVSLGSGVVSGVVAAIVSQPADTVLSKINQEKTDGGVTKAIGNIMRRLGFSGLFLGVGTRCFMVGTLTAGQFFIYDGIKAMLGITGP 297
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1757.4174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8G6_9PHAE2.350e-12674.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8I8_ECTSI1.760e-12274.72N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A836CG87_9STRA2.560e-10266.93EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A4D9D8H6_9STRA2.620e-4635.59EF-hand domain-containing protein n=2 Tax=Monodops... [more]
A0A7S2JYN6_9STRA3.240e-4336.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1YME9_9STRA1.030e-3933.88Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A448Z8G6_9STRA3.280e-3736.69Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FNF7_9STRA1.490e-3635.08Mitochondrial carrier n=1 Tax=Fragilariopsis cylin... [more]
A0A7J7ISG7_9RHOD6.460e-3536.50Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A8J4VA13_9MYCE6.090e-3436.13Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1757contigH-paniculata_contig1757:738..7791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue1.8e-102
Seed eggNOG ortholog2880.D7G8I8
KEGG koko:K15102
KEGG TC2.A.29.4
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.phosphate ion transmembrane transport
EggNOG OGsKOG0767@1,KOG0767@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Exons6
Model size807
Cds size807
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1757.4174.1prot_H-paniculata_contig1757.4174.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1757 738..7791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929377.1288817-CDS-H-paniculata_contig1757:737..9011622929377.1288817-CDS-H-paniculata_contig1757:737..901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 738..901 +
1691480837.0808084-CDS-H-paniculata_contig1757:737..9011691480837.0808084-CDS-H-paniculata_contig1757:737..901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 738..901 +
1622929377.1423542-CDS-H-paniculata_contig1757:3474..36231622929377.1423542-CDS-H-paniculata_contig1757:3474..3623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 3475..3623 +
1691480837.0940726-CDS-H-paniculata_contig1757:3474..36231691480837.0940726-CDS-H-paniculata_contig1757:3474..3623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 3475..3623 +
1622929377.1548603-CDS-H-paniculata_contig1757:4641..47941622929377.1548603-CDS-H-paniculata_contig1757:4641..4794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 4642..4794 +
1691480837.1026099-CDS-H-paniculata_contig1757:4641..47941691480837.1026099-CDS-H-paniculata_contig1757:4641..4794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 4642..4794 +
1622929377.1712916-CDS-H-paniculata_contig1757:5312..54041622929377.1712916-CDS-H-paniculata_contig1757:5312..5404Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 5313..5404 +
1691480837.1103814-CDS-H-paniculata_contig1757:5312..54041691480837.1103814-CDS-H-paniculata_contig1757:5312..5404Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 5313..5404 +
1622929377.185912-CDS-H-paniculata_contig1757:6631..67811622929377.185912-CDS-H-paniculata_contig1757:6631..6781Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 6632..6781 +
1691480837.117948-CDS-H-paniculata_contig1757:6631..67811691480837.117948-CDS-H-paniculata_contig1757:6631..6781Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 6632..6781 +
1622929377.1964645-CDS-H-paniculata_contig1757:7692..77911622929377.1964645-CDS-H-paniculata_contig1757:7692..7791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 7693..7791 +
1691480837.1290655-CDS-H-paniculata_contig1757:7692..77911691480837.1290655-CDS-H-paniculata_contig1757:7692..7791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1757 7693..7791 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1757.4174.1

>prot_H-paniculata_contig1757.4174.1 ID=prot_H-paniculata_contig1757.4174.1|Name=mRNA_H-paniculata_contig1757.4174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
GAQAFLLGSGATIVGYFLYGGLSFGMTEFLKRRFVELAGPGLAALYPIPI
LLGASAVSACLAGAAVTPFETLRIKTVTVPNFPRTLVGAVSELAVQGRAS
ELFDGIPLLLLAEIPFMMAKFAVFDAVSKLAYGIFPFASESVGASLAVSL
VSGMVAGACASFVSQPSDTIMVEVNDREGKADILDTVKGLYNDKGTAGFY
KGAFPRAVKSALNIALQFFLYDSLKRIANVGPDDLKVFFDVMSGLEMGAD
SSMSNTAPDIASLVDGLR*
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mRNA from alignment at H-paniculata_contig1757:738..7791+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1757.4174.1 ID=mRNA_H-paniculata_contig1757.4174.1|Name=mRNA_H-paniculata_contig1757.4174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7054bp|location=Sequence derived from alignment at H-paniculata_contig1757:738..7791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGCGCAAGCCTTCCTGCTAGGATCTGGCGCCACGATTGTGGGGTACTT
CTTGTACGGTGGGTTGTCGTTTGGCATGACGGAGTTCTTGAAGAGGCGGT
TTGTTGAGCTGGCTGGGCCGGGGTTGGCGGCACTGTACCCGATCCCTATC
TTGCTTGGTGCCAGGTATGTTTTAAAAAATGTGTTCTACATATGTGTATA
TACTCCAGAGTATATATCAGTTGATTTTTCTTATCGTGACGTTGGATTTT
AGTCTTCTACTTGTCTTGCTTTTTCGTCATGACTTCAGATTTTGCAGGGG
CGTTTTGTCCGTTTTTTTTTTTTTCGTGTAAGAATAGAGTCATGCATGCG
GCAGGTACGTTTGTTCGTTTTCGTGATTTTACTCTTCTCGTTCGATTATG
AGCATTTTTTTCACTGTCGATGTTGGTGTCCTCCTCATGGAACTAACTGT
ATTTAACAACTGTTTATAGATTTGTGTCTGTTTGGTACCGTGCTTTTGTT
TTGTGTATTTTCACGTTCATGTCGGGCGTTTCCCGCCCCACCGCCTCGTC
CCTCGTTAATCATCCTTGGACACGACGTCGTGTTCTTGATGTATTGCTTT
CATTTTCACGTTAATTTGTTTCCCCGTAATATGAAGAAGATGGTGAAGAT
GGAGGCTCTGCTTCTGCACACTGTTTTCTATTCTGCTATGACATTTTTCT
ACGAGAGGAAACACCTTCCGTTGGTTAGTTTGTAGCATTGCGCCATTGCA
GGGTTATCCGTCCTGAGTTGTTTTTCGGCGTGACATGACTGTAGGCGTCC
AAATCCAGCGTGCTCATTTCTTGTACCTGTACCTTCCTTATTGTTATCTA
TTTTCGCCGAGACTCGTCCGTCGCAAGCCTAGCCTCGGGTTCGGGTTCGT
GCCCCCTTGATTTGATCATCGCGCGTTGAGAAGCCATCATCCCACACCAT
GCACACCCCCGTGTGTTTGTGCATTCAATAGGGCTGTATATGGGTATCGA
TACGAAAACGATGCATCGTTTGTTGGTCCTACAGATATAGATCGATCGGC
CGTCTTCCCGATATATCGATATATTTCCCGAGTAGTATCGTCACTATCTA
CTGAACGTGCGCATGACAGTCATGCTCCAACATCTCCTAGCACCACATCA
ACGACGTGGACCAGCACACCCTGCGCAGCCGGGTACCAAACGCATGAGCT
CCCCCCAACCTCTAGCACGTCGATGAAGTAGTGCCTGGCACGCTCTCGTT
CTCTTTCCCAGTAGCCCCACGGACACGTTGCGAACTCACAGGGTGTTTCA
AAAATATATATTTTGTGGTTGGAAGTTCTCCTTTTTCTCGAAGAATTGTC
CCGTCAGTTCGAGTTTTGGCTGTGCCCCTACGAGGTACTCGAGATCCTTG
ATTTTTGAAGAGAGATGAAGCCGAAACGCTTAATTCGCCTGCCTCCGGCG
GTGCCTGCGGCGAGGCGCCCTCGCCAGCCGGGGGGGAAGCGTTGGGACTC
GGGATAAGCCGGTCGCTTGCTCGTGCTGACGCACTCGCCTGGCGCTTCGC
GCGGCCGGCTCGTTTCGCTCGCATCAACACATGTACCAATATCGATATAT
CAGTGATGTATCAATTTATTGGCTTCGCCGACCTATCGATGTATTTTTTT
TTATGTATTTCTGTGCTTTCAAATGACCGATACACAGCCCTAGCACTCCA
TGTTTGTTTAGAGGTGTGGGACAGCAACACTGTTTCTTTGCCATGATGCC
GTGTGTGATGTGATATTTGTGTGCGGACACATGGTTTATCGTACCGTGTT
TTGCTGTTTGATTATGGCATCCATATGGATCCACAATATTTCCCCATTTC
GAGTATATATGTTAGCCCGCCGCCCGCCCCGATCCCCTCTCTCCGTCCCT
TATGTTGTTTGCAGTTTGCTGATGAATACGTAGATAGTGTAGCTGCCTTA
AGTGTGTGACTGCGTATCTCAAGCGCGATATGATCTTGTACTACAATTAC
TGCAACATTCCGACAAGTCATGCAGCAAGTTGACCTCCCCCCCCGCAATC
CTACTCCTGCACTAGGAGTTGGCATCAATATAGGAAGTCGGTGGAGCACA
AAATATCAAGTACCCACGCCAAAATATAATGTCAAACTCAACCCTAACCC
GACACCTACATCTACACCTACACCTAGGCCTTATCCAATCGTGGGTGTCC
CCTGCCTCTTGGTCATTATCTTCTCGATCTTCACACCAACCCCCGCCGAC
TCGCCCATTGTATCTTCTTTTCCGATTATTTTTCAAAAATCATTATATTT
GTACTGAAATATCGTATTATGTTTTTGCAAAGAACGCCCCCGGGTGATAA
AAAATAAAAAATCTTCGTTTCAACCTCGATTTTTTTGGAAAATGACGGCC
GCTGACATATGCGCACGGTGAGACAGATGTCGTCAACACATTTTCATTAG
ATAGGAAGACTCTTTTGATCGTACAGGGTCCTTTATCGTGTCTCTCGAGA
CGATCGCCCTTAGACGGAGCTAAGGTTATGGCCATATGGCATTATTTTGA
TGCTATGCCGTACCTTGTGGCAAACGGTCTTCAAATAAAGAGAAGGGGAA
TAAATTCCCATCTTGGTCCAGAAGAAAGGCAGCGAAGCACAGTCAATATC
CATTTGTTTTCTCCAAGACGTTTCCTTCTCTCCTTGCCCCCCCCCCCGCG
CGCGCGCGCCACTTTGCCTCCCCTTGCGTTTTGGCAGCGCCGTGTCAGCG
TGCCTTGCGGGCGCAGCAGTTACGCCATTTGAGACCCTGCGCATCAAGAC
GGTCACCGTGCCCAACTTCCCCAGGACTCTGGTTGGAGCGGTCTCGGAAC
TGGCGGTGCAAGGACGGGCTTCGGAGCTGTTCGACGGTGAGTGGTGGATG
GCTTACCTCTTGTCACCCTATTGTTGTTTATCCTTTGAATAGGTTGCGAT
TGAAGGGAAAGCTAGTCTTGAGTGATGATAGTTTGCAAGGCCTAGGGGGG
TCGTGCAGCCGTAAATTCAATCGTTTGTCGGTCGACCCAGGTTACTTGTC
GACGGACAGCATTTTTCTTTTTCTCTGCTGTTCTTTTTCGGCCTCAAATC
ATGGTTTGTTTTTGCACTGTGCAAGGCTAATATTATTAATCCCTCACCTC
TTTTATCCCCGGACCGCATCTGATCCTCGTGTGATCCCCAACTTACAGAT
GAGGAAAAAACGATGGATATGGCACGATTGCTGCGATAGGGAGCCACCGC
AGTTTAGACAGATAATTCAGTAGAGACAGATGGCAGATGTTGTAGCTCTG
CTGGCATTGCTTTTGCCCACAACGGCTGCAATGCTGGACATTTTTTTCGT
CAGATCGATTTTGTTTTCTGAAACTTGATCCAACTGGAGTGGGGAGTTGA
TTGCCTAGTATATCACAAGAAGTCGTGTCGTTGTATATTCGCCGTGAAGA
GGTCGTGTCATTCCGTTTCGATACAGGCCCTCACGGTACGGTACGGTACG
GTATAGCACATAGAGGTTTGTGATAATCTGTCTCGGTTCCACGGACCTAC
GCCCGAACGTGTAGGGTAGCTCGTGAACTGAGCATGACTGGAAGTCTAGC
CAGAGGTCTTTCAGTGGGTGCAACCCCTACACTGCCTACCTGGTTCGGCC
GAACCGGGGTGGCGTCTACCCCGCAAAGGAATAAACAACTCTGTTCTGTT
AAAGGACATGTAGATATACTTTGGTAAAATACTTCGGTAGAAATACTTGA
AGTATGGAAGCATCGGATAAAGGTTTTTGCCTCAGGCTTCCGGGGGTTAA
AAAAAACAAAAACAATTGTCTCGGTTTTCGTTTTGATTTGATTTTTGATA
GCCCGGCCCGTTTTTTGTGTGGATACGTGTTTTGTGATGTGTGTTTTTCG
GCAGGTATTCCGCTTCTGCTGTTGGCCGAAATCCCCTTCATGATGGCCAA
GTTTGCCGTGTTCGACGCCGTTTCCAAGCTGGCGTACGGTATTTTTCCTT
TTGCCTCAGAGTCGGTGGGGGCCTCGCTCGCCGTGTCCTTGGTCAGCGGA
ATGGTCGGTGAGCATCTTGTTGTTGTCGTTGGATGAAAACGAATAGTTTT
GTTCTAATGCTCTGCTGGCGTTTTTTTGTCTTTCTCTCGCATCTCGGCCC
GTTACGGCTTTGCTCTCTGAACTTTTTTTTTTTTTTTTGTGATTTTGCGT
CTTGACAAAAATTTCGTTTTCTTTTTTTCTGGCAGGCACGAGATGACGCC
CTGCTGCTGTGTCTTGATTCACACCTGGCGTTCTATACTGCGAACTGAGT
TAGCTTGCAATGAATGCTTCGCGAGTTAGATATAAATAACCTTTTGCGAT
ATTATTTTCATGTTTTTTTTTGTTTTTTTTAATAAATAAAATCCTGAATT
CTATGTATATATACGTATTATATATAGTAGTGTTATGTTCCGATCGATCT
CCCGCTTGGTGAATTAATTTCTGCCTCTCAGCCACCCACGCGCACTTATT
TCTTTCGCCCCAAACGTTTTTCCCCTACGTGTTCCGCTCACGCCCGCAAT
GCTTGCAACACGCTCCGTTATACAGCCGGAGCTTGTGCCAGTTTTGTGTC
TCAACCTTCTGACACCATCATGGTAGAGGTCAACGACCGGGAGGGAAAGG
CGGACATTTTAGATACGGTACGTGTCTTCGTTCTTCAGTAGGGGGCGGCA
TCGCCTTTAAGTTGGGGGGTATAACCTTTGTTGGTGCAGGGGGGGCTCTC
GTTGCGGTTGAAAGCGATTGTTGATGAAATGCAGAAGAGGGCTAGATAAG
TAGTGGTTGTACGGTATGCATGTATCTATGCATGTATCTCTCTATGTATC
TATGCATGTATATCTCTATGTATCTATGCATGTATCTCTCTATGTATCTA
TGCATGTATCTCTCTATGTATCTATGCATGTATCTCTCTATGTATCTATG
CATGTATCTCTCTATGTATCTATGCATGTATCTCTCTATGTATCTATGCA
TGTATCTCTCTATGTATCTATGCATGTATCTCTCTATGTATCTATGCATG
TATCTCTCTATGTATCTATGCATGTATCTCTCTATGTATCTATGCATGTA
TCTCTATGTATCTATGCATGTATCTCTCTATGTATCTATGCATGTATCTC
TCTATGTATCTATGCATGTATCTCTCTATGTATCTATGCATGTATATCTC
TATGTATCTATCGGGAACAAGAAAAAACAGTACCATTCATGAATTGGAGC
GACTAAGATATTTGTTTGAGTGTATAGCCACTCTCCTGGGATAAATGATT
CAAGTCGTCAAGTCGTGTGTCGAGGAAGACAAAGCACAAACTGCACAAGC
GTGGCTATGTCTCTTCTTTTTTTTTTGAACCGCACTATTGTCGTAGTACA
CAATAAACGCAAGCGGGCGTAGCGGTTAGGCTCACCGTTGAAACGATGAA
CGGTTGCGACCGCCATTATTCTTGTACGCCTGTGTGTGTTTCGAGAACAG
GAGTGAAATGAGAGGCCACATCTATTATTATCAACGATGCAGTGCCTTTT
TTAGCTGTTTTTTGTTGGCTAAATCACAAAATAAAACCGTTGGTGTTGTT
CTCGACTTTTTTTTTCTTTTTTTTCTTTTTTTTAGCATACTTTTGTTCCT
AGAGTTTTTGCCGGAGTGCAAAGTTTTGCGTCTCTTTTGTTCTATTATTG
GACACCGTATGATATTCGTCAGGATAAGGTATGATTTCATGATGATCCGT
GAGGTACGAAAGAAAGATTTTGTTTTACTCGGCCGGTTGTTAAGTTCTCT
GTGTGCGAGGCACTCGAGTTACGCGGTACTTATCATTCACCTTAAGCTGT
GTTTTTTTTTATTCGGGGCGGGGGCGCGCATGGTTGTTTTTCAGGTTAAA
GGCTTATACAACGACAAAGGGACTGCTGGTTTTTACAAAGGGGCTTTCCC
TCGCGCTGTGAAGTCGGCGCTCAACATCGCCCTGCAGTTCTTCCTCTACG
ATTCTCTGAAACGAATCGCGAACGTGGGGCCGGATGATCTCAAGGTATCT
ATGTATCTATGTATCTATGTATCTATGTGTATACCTCGTTTGCGCTTGTA
ATGAAGATGAAGATACAAGGAGCAACTGATCCATTTGCTTCGGGCGGGGG
GAGTAGTCATGTTTTGCATGTCGTGGCTTTTAGATCACTTACCACAGGTC
CTCGGGAGGACAGAACTTTGTTCCTATCAGAGCGATTTCCGATTGCCAAT
CGCTCTAGATTTTTTCGGGAGGAAGGTTGTCTCTGTGCTCGAGTTATGTA
CCGTACACACCAGATGCCCAAGTGTTGTTGTTGTTGTTGTTGTTGTGTTT
GTTGTTTTCTTAGGAAAAAAATGATGTATAGTAGATGGGCTCAAACAAGG
AGCTTTTGTACTGAAATGTGGTCGGAACACGACACGCGATCCGCCAAAGC
TGGCAGCAAACATAACGCAAGAAATACGTCAGGTTCAGAATAGCTTTCGG
ACTGTTTGTTGTTGACTACAGTAAGCCGTTGACGGGGTCTCCTCCAATCC
CAGCGAGTATCGTAAGCGACCGAAGCGCGGGTAGTTGGTGCGCAGTGTCG
CGGCTCCCGTGAAGCCGCGTGCACACGAAAGAACACACAAAAAAAACATC
TGGCCTCGGCATACCGCCAGAACCCCACTGACGGAGTTGACAATCCATTT
TCAAACACGCTTGTTCTCATTTCGATGATATATAACTCCTACCTCACAAG
TCAAGAGTCATTTCGGCCGGTTTTTGGATAAGTCAGAATTACTGAGCGTA
CCTTCATAGCTAACCGTACACGTGTTTTTTTTTGTCAATTTCCTAAATAA
AACGTCATTTTCCAACCCTTAGTCTTGCGGTACTCTTATCGAATCTAAAA
ATTTTACCTCTCCGCACCGCCCCCCTCCACCTCCACCTCCTCCCCTCCCC
GCCAGGTGTTCTTTGACGTCATGTCCGGCTTGGAAATGGGGGCAGACTCT
TCTATGAGCAACACGGCACCTGACATTGCGTCGTTGGTCGATGGTTTGCG
ATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig1757:738..7791+

>mRNA_H-paniculata_contig1757.4174.1 ID=mRNA_H-paniculata_contig1757.4174.1|Name=mRNA_H-paniculata_contig1757.4174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig1757:738..7791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGCGCAAGCCTTCCTGCTAGGATCTGGCGCCACGATTGTGGGGTACTT
CTTGTACGGTGGGTTGTCGTTTGGCATGACGGAGTTCTTGAAGAGGCGGT
TTGTTGAGCTGGCTGGGCCGGGGTTGGCGGCACTGTACCCGATCCCTATC
TTGCTTGGTGCCAGGGTGCGCAAGCCTTCCTGCTAGGATCTGGCGCCACG
ATTGTGGGGTACTTCTTGTACGGTGGGTTGTCGTTTGGCATGACGGAGTT
CTTGAAGAGGCGGTTTGTTGAGCTGGCTGGGCCGGGGTTGGCGGCACTGT
ACCCGATCCCTATCTTGCTTGGTGCCAGCGCCGTGTCAGCGTGCCTTGCG
GGCGCAGCAGTTACGCCATTTGAGACCCTGCGCATCAAGACGGTCACCGT
GCCCAACTTCCCCAGGACTCTGGTTGGAGCGGTCTCGGAACTGGCGGTGC
AAGGACGGGCTTCGGAGCTGTTCGACGCGCCGTGTCAGCGTGCCTTGCGG
GCGCAGCAGTTACGCCATTTGAGACCCTGCGCATCAAGACGGTCACCGTG
CCCAACTTCCCCAGGACTCTGGTTGGAGCGGTCTCGGAACTGGCGGTGCA
AGGACGGGCTTCGGAGCTGTTCGACGGTATTCCGCTTCTGCTGTTGGCCG
AAATCCCCTTCATGATGGCCAAGTTTGCCGTGTTCGACGCCGTTTCCAAG
CTGGCGTACGGTATTTTTCCTTTTGCCTCAGAGTCGGTGGGGGCCTCGCT
CGCCGTGTCCTTGGTCAGCGGAATGGTCGGTATTCCGCTTCTGCTGTTGG
CCGAAATCCCCTTCATGATGGCCAAGTTTGCCGTGTTCGACGCCGTTTCC
AAGCTGGCGTACGGTATTTTTCCTTTTGCCTCAGAGTCGGTGGGGGCCTC
GCTCGCCGTGTCCTTGGTCAGCGGAATGGTCGCCGGAGCTTGTGCCAGTT
TTGTGTCTCAACCTTCTGACACCATCATGGTAGAGGTCAACGACCGGGAG
GGAAAGGCGGACATTTTAGATACGCCGGAGCTTGTGCCAGTTTTGTGTCT
CAACCTTCTGACACCATCATGGTAGAGGTCAACGACCGGGAGGGAAAGGC
GGACATTTTAGATACGGTTAAAGGCTTATACAACGACAAAGGGACTGCTG
GTTTTTACAAAGGGGCTTTCCCTCGCGCTGTGAAGTCGGCGCTCAACATC
GCCCTGCAGTTCTTCCTCTACGATTCTCTGAAACGAATCGCGAACGTGGG
GCCGGATGATCTCAAGGTTAAAGGCTTATACAACGACAAAGGGACTGCTG
GTTTTTACAAAGGGGCTTTCCCTCGCGCTGTGAAGTCGGCGCTCAACATC
GCCCTGCAGTTCTTCCTCTACGATTCTCTGAAACGAATCGCGAACGTGGG
GCCGGATGATCTCAAGGTGTTCTTTGACGTCATGTCCGGCTTGGAAATGG
GGGCAGACTCTTCTATGAGCAACACGGCACCTGACATTGCGTCGTTGGTC
GATGGTTTGCGATGAGTGTTCTTTGACGTCATGTCCGGCTTGGAAATGGG
GGCAGACTCTTCTATGAGCAACACGGCACCTGACATTGCGTCGTTGGTCG
ATGGTTTGCGATGA
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