mRNA_H-paniculata_contig1756.4169.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 219 bits (559), Expect = 4.830e-61 Identity = 102/181 (56.35%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 373 PPPSYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYH 915
PPP Q+LA LQ+L RGN F + S +S T TFH+FCK FA ELYDE+ +L TG+ L K+M +YD++GF GAVGS DV HI W CP + AR YTGK G T+A++ TVDHSGR LAVT+GF G T DK+IIRYD AV +R DP Y+++ ++L+ +DG E KG YLL+DNGYH
Sbjct: 78 PPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYH 258
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 219 bits (557), Expect = 2.970e-60 Identity = 99/180 (55.00%), Postives = 131/180 (72.78%), Query Frame = 1
Query: 382 SYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYHDV 921
S +IL +LQ+L RGNCFD + + S+MS+ A TFHKFCK+FA EL++EH +L TG +++M YD+LG TGA+GS DV HI W CP + R+YTGK GF TIAY+ TVDH+GRA+A+T GF G T DK+IIRYD V ++ D Y+ RT++L DGT+ E KG Y ++DNGYH+V
Sbjct: 248 STKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEV 427
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.660e-57 Identity = 99/180 (55.00%), Postives = 127/180 (70.56%), Query Frame = 1
Query: 376 PPSYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYH 915
P ++LA LQ+L RGN F + S +S T TFH+FCK FA ELYDE+ +L TG+ L K+M +YD++GF GAVGS DV HI W CP + AR YTGK G T+A++ TVDHSGR LAVT+GF G T DK+IIRYD AV +R DP Y+++ ++L+ +DG E KG YLL+DNGYH
Sbjct: 170 PVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYH 349
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 198 bits (504), Expect = 9.620e-55 Identity = 90/166 (54.22%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 388 QILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKG 885
Q+L +LQ+L RGNCFD + + S+MS+ A TFHKFCK+FA EL++EH +L TG +++M YD+LG TGA+GS DV HI W CP + R+YTGK GF TIAY+ TVDH+GRA+A+T GF G T DK+I+RYD V ++ D Y+ RT++L DGT+ E KG
Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYDAGVHTIKTDAQYTKRTYKLRRADGTYRERKG 168
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 200 bits (508), Expect = 8.910e-54 Identity = 93/182 (51.10%), Postives = 130/182 (71.43%), Query Frame = 1
Query: 376 PPSYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQ--ALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYH 915
P +++LA L +L RGNCF + + S MS +T FH FCK+FA E+YDEH +L + Q L+ +M +YD+LGF+GA+GS+DV HI W+ CP + R+YTGK G TI Y+ TV+H+GRA AVT+GF G T DK+I+ +D AV+ +R D Y+++TF ++N+DGT KG YLL+DNGYH
Sbjct: 121 PVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYH 302
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 197 bits (502), Expect = 4.200e-53 Identity = 91/182 (50.00%), Postives = 128/182 (70.33%), Query Frame = 1
Query: 376 PPSYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQ--ALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYH 915
P +++LA L +L RGNCF + + S MS T FHKFCK+FA E+YDEH +L + Q L+ +M +YD+LGF+GA+GS+DV HI W CP + AR+YTGK G T+ Y+ TV+H+GRA+AVT+GF T DK+ + +D V+ +R D Y+++TF ++N+DGT KG YLL+DNGYH
Sbjct: 94 PVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYH 275
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 189 bits (480), Expect = 1.660e-52 Identity = 89/178 (50.00%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 388 QILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYHDV 921
Q+L +LQ L RGNCFD + + S+MS+ A TFHKFCK+FA EL++EH +L TG +++M YD+LG TGA+GS DV HI W CP + R+YTGK GF TIAY+ TVDH+GRA+A+T G V ++ D Y+ RT++L DGT+ E KG YL++DNGYH+V
Sbjct: 3 QVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSG----------------VHTIKTDAQYTKRTYKLRGADGTFRERKGCYLIVDNGYHEV 164
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.230e-52 Identity = 91/171 (53.22%), Postives = 120/171 (70.18%), Query Frame = 1
Query: 406 QVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYHD 918
QVL +GNCFD V + S MS+S A TFHKFC++FA E++DEH +L TG L+++M + QLG+TGA GS DV HI W+ CP + R++TGK GF TIAY TVDH GR LAVT GF G T DK+IIRYD V +R Y++R ++L +GT +G +L++DNGYH+
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHE 212
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 191 bits (484), Expect = 4.590e-50 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 364 WV*PPPSYQILASLQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQA--LEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYS----------------------------DRTFRLFNKDGTWIEHKGVYLLLDNGYH 915
W P +++LA L +L RGNCF + + S MS T FHKFC++FA E+YDE L T ++ L+ +M +YD+LGFTGAVGS+DV HI W CP + AR+YTGK GF TIAY+ TVDH+GRA+AVT+GF G T DK+I+ +D AV+ + D Y+ ++TF ++N+DGT KG YLL+DNGYH
Sbjct: 77 WASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYH 290
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 185 bits (470), Expect = 8.020e-49 Identity = 88/172 (51.16%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 403 LQVLDRGNCFDRVSKFSVMSESTA*LTFHKFCKNFALELYDEHTFLTTGQALEKLMHEYDQLGFTGAVGSIDVIHIKWDCCPCSFARTYTGK*GFATIAYRATVDHSGRALAVTKGFLGPTKDKSIIRYDVAVQMVREDPTYSDRTFRLFNKDGTWIEHKGVYLLLDNGYHD 918
L+VL +GNCFD V + S MSES A FHKFC++ A E++DEH +L TG L+++M + QLG TGA GS DV HI + CP + R++TGK GF TIAY TVDH+GRALAVT GF G T DK+ IRYD V +R + Y++R ++L +GT +G +L++DNGY++
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE 308 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1756.4169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1756.4169.1 >prot_H-paniculata_contig1756.4169.1 ID=prot_H-paniculata_contig1756.4169.1|Name=mRNA_H-paniculata_contig1756.4169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp MFTTFKRSDTNALRNQTHLSKLRNSITIDRCINFHLLFRHCRLVHPFQLVback to top mRNA from alignment at H-paniculata_contig1756:11782..13929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1756.4169.1 ID=mRNA_H-paniculata_contig1756.4169.1|Name=mRNA_H-paniculata_contig1756.4169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2148bp|location=Sequence derived from alignment at H-paniculata_contig1756:11782..13929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1756:11782..13929+ >mRNA_H-paniculata_contig1756.4169.1 ID=mRNA_H-paniculata_contig1756.4169.1|Name=mRNA_H-paniculata_contig1756.4169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig1756:11782..13929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |