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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 3208 |
| Cds size | 2520 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17551.4164.1 >prot_H-paniculata_contig17551.4164.1 ID=prot_H-paniculata_contig17551.4164.1|Name=mRNA_H-paniculata_contig17551.4164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=840bp
MTFFYVARAAQRSVYTIGRLSRFYRLRSPAHLERTAGISSCRCCGRGADI
FSDVPNIKEQSFSAVAPLHPTQCDREQPGPPPCPRIDKDGGDGVVGQMPA
VSEAGGFDRAKQSGAEEGGGKRGGLGVGESGSISERVATPFEDGDMGLRV
GGAQVSSVAKQTDDQYVPAEVRTLQTEIMRNLKNAGDRKDWVRADRILKD
ALVHPEWKVLVHDKMYGATIAVFAKCQKWQIALEVLDAMDLNGTHPTVVV
YNSVIQACCNGGQWDQAVAILKRMQTEGTARSTGSYHTLLKMCARNGQWE
QVLDILGQMHAEGLVPHLSTCNAAIKACGDASHWQQALVVLGQMQAMGTA
PDVVSYNRAMKACGDHGRWKRVLTLLRTMRNGHTAPDVVSYNIAMNACGR
ARQWKQVVSLMRQMREDQIVPDIVSYNTAMKACGDGGQLDKALDFLRQMR
VEGVTPTVITYTTAINVCRNGGRWEQALGILVQMQAEGVAPNIATYNSAI
TACGNGGNWEKSLDLLRKMEVNQIQPDMVSYNAAMKACRDSGQWKPALGL
LQKMRSDGVPPGVVTYDMAIGACRKDGQWRHALDILLHLQEEGIKPDVAL
YTTAMILCVENGQWEQALDVWKRLQAEGITPDVASYNRAMEACAVGGQWQ
QTLLLWQQMLSQGVEPNAKSYAAAIAACGSGGQWQQALDLLRRMNRQGFV
PGVAEFNMAIAICVDFGRWEEALGAFDLLRETQATGNKPNAASFKLAMDA
CAGGGQWEKALHLLLTEMPANRIMPDVGSYNTVATICGNAGRWDRTLDIL
RRMGSENITPSPASFNAAIFALTLSPKYGGRGGGETLDS* back to topmRNA from alignment at H-paniculata_contig17551:343..4731+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17551.4164.1 ID=mRNA_H-paniculata_contig17551.4164.1|Name=mRNA_H-paniculata_contig17551.4164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4389bp|location=Sequence derived from alignment at H-paniculata_contig17551:343..4731+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAATGCTGCTTTAGACTTGGAACGCTCATGACCTTGCGGCAACTGAGGAG
CTTGTGAAAGGTGGGATACACTGAAATTCTGTTTACTTGGAACCCCGTTC
TATTTGTTATGTTCGTCCTCCTATGCGTGCATGCTTCTCCTGTTGATTTG
GCCCTTTGCGACTGTTCTCTACTATACCACGGTATCCCGGAGATGGCCTG
AGCCCACCACGATTGTTAGCAGCTGATTTTCCAACAGAACTCCTACTCCT
CCTTGCATATTCCTCGCTATAGATATTGCCGAGCAGCAGATTTCCTCCAT
TTAGCTGTCTCTTTGTCTACCTGTAACGTTTGCTACCAACGCTTTATAGA
GACATCCACTCGACCAAGTACACAGATGTTACAAGAATCAACGCAGCATG
GTACAGCTACTAGATTCACCTCGCCTGTATTTACGAAGATGTTCCAAGAA
GCGTGTAGGTATTCGTTCTTTTGGACTTGTATCATGCCCCATCTTGGGGA
GGACCTGTATTATTGTCATAAACCAGTATTGGTGCTCGAATGGATACCAC
CTCATAACCGGAAATTTCAACACGATAGATTTGCGCCTTGAAAATGTCGA
ATGCTGTTTGTGTTGCATCTCGATCGGGTTTGTATCGCTGCTCAGCGGCT
GCGAATATCGGAACAGTAAATCACTAAATCATGCCAACATTCAAATCATT
TAAATCAGGTGGCCATAGTTAGGCTGTACGTTTGAGGTAATATGATACCT
CTTGGGATGATCCCTCGCTTCGATAAAGATGAACCTTGAAGAAGGTACAG
ACAATTGAATGGCAAGCCATGCCACTATCTCCAACCCGAGATGCGTTGGT
TTGTCTGCCATAGATCTCTCGTTACTCAGACTCAACGCAAAGCGGTGACA
TACGCGAGCAAGACTTTTGAGTCCTTGTTTCCTATTTTTCTACTCGAAGG
GGTACACCGCACGAGGACTTCAATTATTGATGACTTTTCATGTTGGAGAG
ACTACAAGCACGAATGAGTGCATAAATTAGTTGACACAACAGCCGCGGAC
GGATGGGTCCTTAATTTCCCTCGGCTGTCTCTGTGCCAGCTTACTATCAG
TGCCGCCCCAAGCTGCGTGCCTTTCTTATTTCGACGTACGGTACGCGACG
AAACACCGACAGCGTTTTTCTTCACAAAGTTCACCATCTTTCTAACCCGC
AACATCGCTCCCTATTTCCATCGCTTCCCCTGATCCCCTAGGCGGCAACG
CCGCCGTGGCTCAATGACTTTCTTCTATGTCGCCCGCGCCGCGCAAAGGT
CCGTATACACCATTGGGCGCTTGTCACGATTCTACAGGTTAAGAAGTCCC
GCTCACCTCGAGCGGACTGCCGGGATCTCATCTTGTCGATGTTGCGGACG
CGGCGCTGATATATTTAGCGACGTTCCAAATATCAAAGAGCAAAGCTTCT
CGGCAGTCGCGCCGTTGCACCCGACGCAATGCGACCGGGAGCAACCGGGT
CCACCACCCTGCCCTCGAATAGACAAAGATGGGGGGGATGGAGTAGTAGG
TCAGATGCCGGCAGTGTCTGAGGCGGGAGGGTTCGATAGAGCAAAACAAT
CAGGAGCGGAGGAAGGCGGAGGGAAGCGTGGTGGCCTCGGTGTTGGTGAG
TCCGGCTCCATCTCGGAAAGAGTAGCGACGCCGTTTGAGGACGGCGATAT
GGGTTTGCGAGTCGGAGGGGCACAGGTTAGCAGTGTTGCGAAACAGACCG
ACGATCAGTACGTCCCAGCGGAAGTACGTACGCTTCAAACGGAGATTATG
CGGAACCTCAAGAACGCTGGTGATCGGAAAGATTGGGTGCGGGCGGATCG
CATTCTGAAGGACGCTCTCGTGCACCCGGAGTGGAAGGTACTCGTGCACG
ACAAGATGTACGGCGCTACGATAGCGGTATTCGCCAAGTGCCAAAAATGG
CAAATAGCGCTCGAAGTATTGGATGCCATGGACTTGAACGGAACGCATCC
GACTGTCGTCGTCTACAACTCGGTCATTCAAGCATGCTGCAACGGTGGCC
AGTGGGACCAGGCCGTGGCTATTCTTAAACGAATGCAGACTGAGGGCACG
GCGCGTAGCACGGGGAGCTACCACACGCTCCTGAAAATGTGCGCGAGAAA
TGGCCAGTGGGAGCAAGTGTTGGATATACTCGGGCAAATGCATGCGGAGG
GCTTGGTGCCCCACCTCTCGACCTGCAATGCGGCCATAAAGGCGTGTGGT
GATGCTAGCCACTGGCAGCAAGCTTTGGTTGTCTTGGGACAAATGCAGGC
GATGGGCACGGCTCCCGATGTCGTGAGCTACAACAGGGCCATGAAAGCGT
GCGGAGACCATGGCCGATGGAAGCGCGTGTTGACTCTACTGCGGACAATG
CGGAATGGCCACACCGCCCCCGACGTGGTGAGCTACAACATCGCGATGAA
TGCTTGTGGTAGAGCTCGCCAGTGGAAACAAGTGGTGAGTCTCATGCGGC
AGATGCGAGAGGACCAAATTGTCCCTGATATTGTCAGCTACAATACGGCG
ATGAAAGCATGTGGGGACGGCGGCCAGCTCGACAAGGCATTGGATTTTTT
GCGGCAAATGCGAGTCGAGGGTGTAACGCCAACCGTCATAACCTATACTA
CGGCGATCAATGTGTGCAGGAATGGTGGTCGATGGGAACAGGCCTTGGGC
ATTTTGGTACAGATGCAAGCGGAAGGCGTTGCACCGAACATCGCGACGTA
CAACTCGGCTATAACAGCGTGCGGTAACGGTGGTAACTGGGAGAAGTCAT
TGGATCTACTGCGGAAGATGGAGGTCAACCAGATCCAACCCGACATGGTG
AGCTACAACGCAGCGATGAAGGCATGTCGCGACAGTGGTCAGTGGAAACC
AGCTTTGGGTCTCTTGCAGAAAATGCGGTCTGATGGCGTCCCGCCTGGTG
TCGTGACCTACGATATGGCCATCGGGGCATGCAGGAAGGACGGTCAATGG
AGACACGCTTTGGATATCTTGTTGCATTTGCAGGAGGAGGGCATCAAACC
TGATGTCGCACTGTACACCACAGCTATGATTTTGTGCGTGGAAAATGGTC
AATGGGAGCAGGCGTTGGATGTTTGGAAGCGACTGCAAGCTGAGGGTATC
ACTCCCGACGTTGCAAGCTATAACAGGGCCATGGAAGCTTGTGCAGTTGG
CGGGCAGTGGCAGCAGACACTGCTTTTATGGCAGCAGATGCTGTCTCAGG
GTGTCGAGCCCAATGCCAAGAGCTACGCGGCGGCGATAGCAGCATGTGGG
AGCGGCGGCCAGTGGCAACAAGCCTTGGACCTGTTGCGGCGTATGAACCG
GCAGGGTTTTGTACCCGGCGTCGCGGAGTTCAACATGGCCATCGCGATAT
GCGTGGATTTTGGTCGTTGGGAGGAGGCATTGGGGGCCTTTGATCTCCTG
CGGGAGACACAGGCCACGGGTAACAAGCCCAACGCCGCGAGCTTCAAATT
GGCCATGGATGCTTGTGCGGGCGGTGGTCAGTGGGAGAAGGCTTTGCATC
TTCTGCTGACAGAGATGCCGGCAAATCGTATCATGCCTGATGTTGGGAGC
TACAACACTGTAGCCACGATATGCGGGAACGCGGGCCGTTGGGATCGGAC
TCTGGATATCTTACGAAGGATGGGCTCGGAAAATATCACGCCCAGTCCCG
CCAGCTTCAACGCGGCGATTTTTGCTTTGACGTTGTCACCAAAATATGGG
GGACGGGGGGGGGGCGAGACTTTGGACTCTTAAACGGATCTACACCGCAT
TTACACTCTTTCTTTTTTTTAGTGCACACCGTGTTCGTGGCTTGCCATGA
ACACAGCACGATGACCTGTTGTTCAGTCACAAATGTTTGCTGTGGCGCAA
GTGTCTGCGGCGAATCAAAAGATCGTCTGCCAGCTGAATAATCGCCAACT
AATATTATTACAGAAGGTGCACCTGACATTGTAAATTGCATGGAGTGAAA
ATCGGGCGGAGGCCGCTCTTTTAGTAGTCTGTTTGCGACTGGCTTCAGCT
CGGCGGCGGGTTCCGTTTGGTTGAAAATAGTATACTAGATTCAATTTGGG
TCTACCCTTTTTTTGCTAGAGAGATTAGATTTAGTTGAGCCTGGCTAGTT
AATCAACGGCGGAAGCAGTACTTGAATGAAGCCCGATGAAGTGGGATCGC
GAGGCTCAATGTTTTGGGATGAAATTCGGTTTTTGTGTGCATGACACGAG
AGGGCGCAATTCCGTCTCGGATTTATATATTTTTCCCTCGTGTCCGTCTC
AGATCTTGGAATCGCCGGCTTTGCTCTTGTTATTATTAGCACGTGCTTGG
GTGGAAGCATGCAGCATCGAAGAAAATCTCCATCACCAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig17551:343..4731+ >mRNA_H-paniculata_contig17551.4164.1 ID=mRNA_H-paniculata_contig17551.4164.1|Name=mRNA_H-paniculata_contig17551.4164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5040bp|location=Sequence derived from alignment at H-paniculata_contig17551:343..4731+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTTCTTCTATGTCGCCCGCGCCGCGCAAAGGTCCGTATACACCAT
TGGGCGCTTGTCACGATTCTACAGGTTAAGAAGTCCCGCTCACCTCGAGC
GGACTGCCGGGATCTCATCTTGTCGATGTTGCGGACGCGGCGCTGATATA
TTTAGCGACGTTCCAAATATCAAAGAGCAAAGCTTCTCGGCAGTCGCGCC
GTTGCACCCGACGCAATGCGACCGGGAGCAACCGGGTCCACCACCCTGCC
CTCGAATAGACAAAGATGGGGGGGATGGAGTAGTAGGTCAGATGCCGGCA
GTGTCTGAGGCGGGAGGGTTCGATAGAGCAAAACAATCAGGAGCGGAGGA
AGGCGGAGGGAAGCGTGGTGGCCTCGGTGTTGGTGAGTCCGGCTCCATCT
CGGAAAGAGTAGCGACGCCGTTTGAGGACGGCGATATGGGTTTGCGAGTC
GGAGGGGCACAGGTTAGCAGTGTTGCGAAACAGACCGACGATCAGTACGT
CCCAGCGGAAGTACGTACGCTTCAAACGGAGATTATGCGGAACCTCAAGA
ACGCTGGTGATCGGAAAGATTGGGTGCGGGCGGATCGCATTCTGAAGGAC
GCTCTCGTGCACCCGGAGTGGAAGGTACTCGTGCACGACAAGATGTACGG
CGCTACGATAGCGGTATTCGCCAAGTGCCAAAAATGGCAAATAGCGCTCG
AAGTATTGGATGCCATGGACTTGAACGGAACGCATCCGACTGTCGTCGTC
TACAACTCGGTCATTCAAGCATGCTGCAACGGTGGCCAGTGGGACCAGGC
CGTGGCTATTCTTAAACGAATGCAGACTGAGGGCACGGCGCGTAGCACGG
GGAGCTACCACACGCTCCTGAAAATGTGCGCGAGAAATGGCCAGTGGGAG
CAAGTGTTGGATATACTCGGGCAAATGCATGCGGAGGGCTTGGTGCCCCA
CCTCTCGACCTGCAATGCGGCCATAAAGGCGTGTGGTGATGCTAGCCACT
GGCAGCAAGCTTTGGTTGTCTTGGGACAAATGCAGGCGATGGGCACGGCT
CCCGATGTCGTGAGCTACAACAGGGCCATGAAAGCGTGCGGAGACCATGG
CCGATGGAAGCGCGTGTTGACTCTACTGCGGACAATGCGGAATGGCCACA
CCGCCCCCGACGTGGTGAGCTACAACATCGCGATGAATGCTTGTGGTAGA
GCTCGCCAGTGGAAACAAGTGGTGAGTCTCATGCGGCAGATGCGAGAGGA
CCAAATTGTCCCTGATATTGTCAGCTACAATACGGCGATGAAAGCATGTG
GGGACGGCGGCCAGCTCGACAAGGCATTGGATTTTTTGCGGCAAATGCGA
GTCGAGGGTGTAACGCCAACCGTCATAACCTATACTACGGCGATCAATGT
GTGCAGGAATGGTGGTCGATGGGAACAGGCCTTGGGCATTTTGGTACAGA
TGCAAGCGGAAGGCGTTGCACCGAACATCGCGACGTACAACTCGGCTATA
ACAGCGTGCGGTAACGGTGGTAACTGGGAGAAGTCATTGGATCTACTGCG
GAAGATGGAGGTCAACCAGATCCAACCCGACATGGTGAGCTACAACGCAG
CGATGAAGGCATGTCGCGACAGTGGTCAGTGGAAACCAGCTTTGGGTCTC
TTGCAGAAAATGCGGTCTGATGGCGTCCCGCCTGGTGTCGTGACCTACGA
TATGGCCATCGGGGCATGCAGGAAGGACGGTCAATGGAGACACGCTTTGG
ATATCTTGTTGCATTTGCAGGAGGAGGGCATCAAACCTGATGTCGCACTG
TACACCACAGCTATGATTTTGTGCGTGGAAAATGGTCAATGGGAGCAGGC
GTTGGATGTTTGGAAGCGACTGCAAGCTGAGGGTATCACTCCCGACGTTG
CAAGCTATAACAGGGCCATGGAAGCTTGTGCAGTTGGCGGGCAGTGGCAG
CAGACACTGCTTTTATGGCAGCAGATGCTGTCTCAGGGTGTCGAGCCCAA
TGCCAAGAGCTACGCGGCGGCGATAGCAGCATGTGGGAGCGGCGGCCAGT
GGCAACAAGCCTTGGACCTGTTGCGGCGTATGAACCGGCAGGGTTTTGTA
CCCGGCGTCGCGGAGTTCAACATGGCCATCGCGATATGCGTGGATTTTGG
TCGTTGGGAGGAGGCATTGGGGGCCTTTGATCTCCTGCGGGAGACACAGG
CCACGGGTAACAAGCCCAACGCCGCGAGCTTCAAATTGGCCATGGATGCT
TGTGCGGGCGGTGGTCAGTGGGAGAAGGCTTTGCATCTTCTGCTGACAGA
GATGCCGGCAAATCGTATCATGCCTGATGTTGGGAGCTACAACACTGTAG
CCACGATATGCGGGAACGCGGGCCGTTGGGATCGGACTCTGGATATCTTA
CGAAGGATGGGCTCGGAAAATATCACGCCCAGTCCCGCCAGCTTCAACGC
GGCGATTTTTGCTTTGACGTTGTCACCAAAATATGGGGGACGGGGGGGGG
GCGAGACTTTGGACTCTTAAATGACTTTCTTCTATGTCGCCCGCGCCGCG
CAAAGGTCCGTATACACCATTGGGCGCTTGTCACGATTCTACAGGTTAAG
AAGTCCCGCTCACCTCGAGCGGACTGCCGGGATCTCATCTTGTCGATGTT
GCGGACGCGGCGCTGATATATTTAGCGACGTTCCAAATATCAAAGAGCAA
AGCTTCTCGGCAGTCGCGCCGTTGCACCCGACGCAATGCGACCGGGAGCA
ACCGGGTCCACCACCCTGCCCTCGAATAGACAAAGATGGGGGGGATGGAG
TAGTAGGTCAGATGCCGGCAGTGTCTGAGGCGGGAGGGTTCGATAGAGCA
AAACAATCAGGAGCGGAGGAAGGCGGAGGGAAGCGTGGTGGCCTCGGTGT
TGGTGAGTCCGGCTCCATCTCGGAAAGAGTAGCGACGCCGTTTGAGGACG
GCGATATGGGTTTGCGAGTCGGAGGGGCACAGGTTAGCAGTGTTGCGAAA
CAGACCGACGATCAGTACGTCCCAGCGGAAGTACGTACGCTTCAAACGGA
GATTATGCGGAACCTCAAGAACGCTGGTGATCGGAAAGATTGGGTGCGGG
CGGATCGCATTCTGAAGGACGCTCTCGTGCACCCGGAGTGGAAGGTACTC
GTGCACGACAAGATGTACGGCGCTACGATAGCGGTATTCGCCAAGTGCCA
AAAATGGCAAATAGCGCTCGAAGTATTGGATGCCATGGACTTGAACGGAA
CGCATCCGACTGTCGTCGTCTACAACTCGGTCATTCAAGCATGCTGCAAC
GGTGGCCAGTGGGACCAGGCCGTGGCTATTCTTAAACGAATGCAGACTGA
GGGCACGGCGCGTAGCACGGGGAGCTACCACACGCTCCTGAAAATGTGCG
CGAGAAATGGCCAGTGGGAGCAAGTGTTGGATATACTCGGGCAAATGCAT
GCGGAGGGCTTGGTGCCCCACCTCTCGACCTGCAATGCGGCCATAAAGGC
GTGTGGTGATGCTAGCCACTGGCAGCAAGCTTTGGTTGTCTTGGGACAAA
TGCAGGCGATGGGCACGGCTCCCGATGTCGTGAGCTACAACAGGGCCATG
AAAGCGTGCGGAGACCATGGCCGATGGAAGCGCGTGTTGACTCTACTGCG
GACAATGCGGAATGGCCACACCGCCCCCGACGTGGTGAGCTACAACATCG
CGATGAATGCTTGTGGTAGAGCTCGCCAGTGGAAACAAGTGGTGAGTCTC
ATGCGGCAGATGCGAGAGGACCAAATTGTCCCTGATATTGTCAGCTACAA
TACGGCGATGAAAGCATGTGGGGACGGCGGCCAGCTCGACAAGGCATTGG
ATTTTTTGCGGCAAATGCGAGTCGAGGGTGTAACGCCAACCGTCATAACC
TATACTACGGCGATCAATGTGTGCAGGAATGGTGGTCGATGGGAACAGGC
CTTGGGCATTTTGGTACAGATGCAAGCGGAAGGCGTTGCACCGAACATCG
CGACGTACAACTCGGCTATAACAGCGTGCGGTAACGGTGGTAACTGGGAG
AAGTCATTGGATCTACTGCGGAAGATGGAGGTCAACCAGATCCAACCCGA
CATGGTGAGCTACAACGCAGCGATGAAGGCATGTCGCGACAGTGGTCAGT
GGAAACCAGCTTTGGGTCTCTTGCAGAAAATGCGGTCTGATGGCGTCCCG
CCTGGTGTCGTGACCTACGATATGGCCATCGGGGCATGCAGGAAGGACGG
TCAATGGAGACACGCTTTGGATATCTTGTTGCATTTGCAGGAGGAGGGCA
TCAAACCTGATGTCGCACTGTACACCACAGCTATGATTTTGTGCGTGGAA
AATGGTCAATGGGAGCAGGCGTTGGATGTTTGGAAGCGACTGCAAGCTGA
GGGTATCACTCCCGACGTTGCAAGCTATAACAGGGCCATGGAAGCTTGTG
CAGTTGGCGGGCAGTGGCAGCAGACACTGCTTTTATGGCAGCAGATGCTG
TCTCAGGGTGTCGAGCCCAATGCCAAGAGCTACGCGGCGGCGATAGCAGC
ATGTGGGAGCGGCGGCCAGTGGCAACAAGCCTTGGACCTGTTGCGGCGTA
TGAACCGGCAGGGTTTTGTACCCGGCGTCGCGGAGTTCAACATGGCCATC
GCGATATGCGTGGATTTTGGTCGTTGGGAGGAGGCATTGGGGGCCTTTGA
TCTCCTGCGGGAGACACAGGCCACGGGTAACAAGCCCAACGCCGCGAGCT
TCAAATTGGCCATGGATGCTTGTGCGGGCGGTGGTCAGTGGGAGAAGGCT
TTGCATCTTCTGCTGACAGAGATGCCGGCAAATCGTATCATGCCTGATGT
TGGGAGCTACAACACTGTAGCCACGATATGCGGGAACGCGGGCCGTTGGG
ATCGGACTCTGGATATCTTACGAAGGATGGGCTCGGAAAATATCACGCCC
AGTCCCGCCAGCTTCAACGCGGCGATTTTTGCTTTGACGTTGTCACCAAA
ATATGGGGGACGGGGGGGGGGCGAGACTTTGGACTCTTAA back to top
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