prot_H-paniculata_contig17536.4157.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17536.4157.1
Unique Nameprot_H-paniculata_contig17536.4157.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
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BLAST of mRNA_H-paniculata_contig17536.4157.1 vs. uniprot
Match: D7FYY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY9_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.880e-10
Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0 
Query:    1 MGMSSRAFEVARAVSESEEKGVDPNALTVAYLARKQFLDMQK-RPTHQAMCLQIIARFKSSYG--KAPKPADLSQIEQEAKHAGDFMEGINDIVPYDKWTPALRTEAEKLAFVRVGACITWLKPHVRV 125
            +G+ + AF   +AVSESEEKGVD   L+ + L     L     R   Q++ + I+ARFK++    K P   DL +++Q A  AG++ + +  ++PY+ WT         L + +     TW K H+ V
Sbjct:   47 IGLKAPAFAALKAVSESEEKGVDIGCLSKSLLDCDAVLKFPPGREFEQSLLIHILARFKTNEPGHKMPAKTDLPKLKQRALDAGEYFQLVTSVIPYESWTSPFHKSFYSLVYGKHTDWETWGKGHMTV 174
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BLAST of mRNA_H-paniculata_contig17536.4157.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.330e-6
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 0 
Query:    2 GMSSRAFEVARAVSESEEKGVDPNALTVAYLARKQFLDMQKRPTHQAMCLQIIARFKS-SYGKAPKP-ADLSQIEQEAKHAGDFMEGINDIVPYDKWTPALRTEAEKLAFVRVGACITWLKPHVRVILEEIKALEAKLP 138
            G+   A    + + ESE+K +D N +T+AY+++  F+ +      Q   LQI+AR+K    G+A K   D   I  +AK    +   +  IVPY  W+  L++E E +A+ +  A  ++ K  +  + +E+  L   LP
Sbjct:  178 GIKEEALTALKDLVESEDKSIDLNLVTLAYISKDDFMALSAE--EQGFNLQILARWKKFQQGRAFKADIDTPPIIAQAKDVAQWYFALCGIVPYQDWSQELKSEFENMAYAK-PALWSFQKAFLDGLEDEVLKLSKGLP 313
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17536.4157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY9_ECTSI1.880e-1032.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN26_9PHAE4.330e-629.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17536contigH-paniculata_contig17536:2521..4759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17536.4157.1mRNA_H-paniculata_contig17536.4157.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17536 2318..5344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17536.4157.1 ID=prot_H-paniculata_contig17536.4157.1|Name=mRNA_H-paniculata_contig17536.4157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MGMSSRAFEVARAVSESEEKGVDPNALTVAYLARKQFLDMQKRPTHQAMC
LQIIARFKSSYGKAPKPADLSQIEQEAKHAGDFMEGINDIVPYDKWTPAL
RTEAEKLAFVRVGACITWLKPHVRVILEEIKALEAKLPDDCDEEIRAQVS
DVLWSKPLERIEKIMEADADLRVPLKKRQEKYQETKNKVNRLELTKGGPS
PLGRRNKNAGDDDESNKDDPNVLDNDYYNGDNDLDDDGMDSGSGKRCPGK
DARKGVLCPTCKSPASAKGFRHASERQPQAT*
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