prot_H-paniculata_contig17527.4155.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17527.4155.1
Unique Nameprot_H-paniculata_contig17527.4155.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
[Close]
BLAST of mRNA_H-paniculata_contig17527.4155.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.150e-5
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:    5 VHVLWYSPVNKATRANAATLDAATYGQGSIGTDFSEVVEATIKGKRK-RSRHVPDMDHEPVSRIVAHCEKIKPNGKKIPVKILTQL 89
            V + W+ P N  TR  AA+L    YG+ +    +  V+ A+   +R  +++ V D+  EPV  IVA C+K+  NG+KIP ++L  L
Sbjct:  346 VDLHWFRPTNDHTRDKAASLTLDEYGERTFVEGY--VMTASDGTRRSGKAKKVKDVSWEPVEGIVATCDKLVGNGRKIPNRVLKVL 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17527.4155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCW3_9PHAE2.150e-536.05Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17527contigH-paniculata_contig17527:4298..4600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17527.4155.1mRNA_H-paniculata_contig17527.4155.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17527 4298..4627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17527.4155.1 ID=prot_H-paniculata_contig17527.4155.1|Name=mRNA_H-paniculata_contig17527.4155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
VNGEVHVLWYSPVNKATRANAATLDAATYGQGSIGTDFSEVVEATIKGKR
KRSRHVPDMDHEPVSRIVAHCEKIKPNGKKIPVKILTQLSELHKIKVGRE
*
back to top