prot_H-paniculata_contig17522.4151.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17522.4151.1
Unique Nameprot_H-paniculata_contig17522.4151.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig17522.4151.1 vs. uniprot
Match: D7FJF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF2_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.350e-50
Identity = 81/111 (72.97%), Postives = 96/111 (86.49%), Query Frame = 0 
Query:    1 AAAVFCILSELSWRQLRTYFVVPALWIFTVCTMIGAVYILIAKLLIDRP--GPNSTETNDFWGLALVSFWMSIVLLLDRNNVVGVFRGYTSLSLEHERDKEGHVQMGEVVL 109
            AAAVFCILSELSWRQLRT+FV+P LW+FT+C+ IGA Y+LIA+LL+     G +  +  DF+GL LVSFWMSIVLLLDR+NVVGVFRGYTSL+ EHERD+EGHVQMGEVV+
Sbjct:    9 AAAVFCILSELSWRQLRTFFVLPTLWVFTLCSWIGAAYVLIAQLLVGHAEGGASGEDAMDFYGLLLVSFWMSIVLLLDRHNVVGVFRGYTSLT-EHERDREGHVQMGEVVI 118
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BLAST of mRNA_H-paniculata_contig17522.4151.1 vs. uniprot
Match: A0A6H5JWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR3_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.670e-46
Identity = 78/110 (70.91%), Postives = 93/110 (84.55%), Query Frame = 0 
Query:    2 AAVFCILSELSWRQLRTYFVVPALWIFTVCTMIGAVYILIAKLLIDRP--GPNSTETNDFWGLALVSFWMSIVLLLDRNNVVGVFRGYTSLSLEHERDKEGHVQMGEVVL 109
            AAVFCILSELSWR LRT+ V+P LW+FT+C+ IGA Y+LIA+LL+     G +  +  DF+GL LVSFWMSIVLLLDR+NVVGVFRGYTSL+ EHERD+EGHVQMGEVV+
Sbjct:  104 AAVFCILSELSWRHLRTFLVLPTLWMFTLCSWIGAGYVLIAQLLVGHAEGGASGEDAMDFYGLLLVSFWMSIVLLLDRHNVVGVFRGYTSLT-EHERDREGHVQMGEVVI 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17522.4151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJF2_ECTSI1.350e-5072.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWR3_9PHAE2.670e-4670.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..57
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 57..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17522contigH-paniculata_contig17522:1752..3370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17522.4151.1mRNA_H-paniculata_contig17522.4151.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17522 1752..3370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17522.4151.1 ID=prot_H-paniculata_contig17522.4151.1|Name=mRNA_H-paniculata_contig17522.4151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
AAAVFCILSELSWRQLRTYFVVPALWIFTVCTMIGAVYILIAKLLIDRPG
PNSTETNDFWGLALVSFWMSIVLLLDRNNVVGVFRGYTSLSLEHERDKEG
HVQMGEVVL*
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