prot_H-paniculata_contig17516.4149.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig17516.4149.1
Unique Name	prot_H-paniculata_contig17516.4149.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	109

Homology

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 5.630e-33
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 0

Query:    9 DYVDCDFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADTK---KLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRGR 108
            D VDCDFLI+GAGSSGCVLASRLVR GLKV+LVE GPAD     K++  P  W+  AS G+ LSE F TVPQ+ L  R++PA+ G GGGGSSNVNA LY RGR
Sbjct:   10 DTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADASTLAKVVGRPSGWVHQASSGEGLSEAFNTVPQAGLGYRELPAYNGVGGGGSSNVNAGLYQRGR 112

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: A0A0B5DTM4_9RHOB (Glucose-methanol-choline oxidoreductase n=1 Tax=Celeribacter indicus TaxID=1208324 RepID=A0A0B5DTM4_9RHOB)

HSP 1 Score: 88.6 bits (218), Expect = 2.940e-18
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0

Query:   11 VDCDFLIIGAGSSGCVLASRLVRQG-LKVVLVEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            +DCD+LIIGAGS+GCVLA+RL      KV+L+E GP DT   ++ P   M     G + +  F + P+ NL+NR++P  RG+G GGSS++N  LYVRG
Sbjct:    2 LDCDYLIIGAGSAGCVLANRLSEDPEAKVMLLEAGPRDTSPWIKLP-AGMKKVFYGKKYNWGFESEPEPNLHNRRIPMARGKGLGGSSSINGMLYVRG 98

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: A0A845A6J7_9SPHN (Choline dehydrogenase n=1 Tax=Altericroceibacterium indicum TaxID=374177 RepID=A0A845A6J7_9SPHN)

HSP 1 Score: 84.7 bits (208), Expect = 6.620e-17
Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 0

Query:   12 DCDFLIIGAGSSGCVLASRLVRQ-GLKVVLVEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            DCDFLI+GAGSSGCVLA+RL     +KV+L+E G +D   L+  P  WM  AS         MT P+ +++NR  P  RGR  GG S++N ++Y+RG
Sbjct:    3 DCDFLIVGAGSSGCVLANRLSEDPSVKVILLEAGGSDKHPLISMPMAWM-KASMEPRFGWGTMTEPEPHMDNRVQPLPRGRVLGGCSSINGTMYIRG 98

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: L1JH16_GUITC (GMC_OxRdtase_N domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH16_GUITC)

HSP 1 Score: 83.6 bits (205), Expect = 1.710e-16
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0

Query:   13 CDFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADT--KKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRGR 108
            CD+L++G G S C L + L   G  VV+VE G A+   +K++  P  W  AAS G  +S  + TVPQ  + ++ +PAFRG G GG+ NVNA ++ RGR
Sbjct:   34 CDYLVVGGGCSSCSLVACLAAAGKSVVVVEAGGAEPWERKVVDDPQSWFAAASHGRPVSRLYRTVPQLAVLSKLMPAFRGEGFGGTGNVNACIWCRGR 131

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: UPI001C99A7C8 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Caenibius sp. WL TaxID=2872646 RepID=UPI001C99A7C8)

HSP 1 Score: 82.8 bits (203), Expect = 3.140e-16
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0

Query:   14 DFLIIGAGSSGCVLASRLVRQ-GLKVVLVEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            D++I+GAGS+GCVLA+RL    G KV+L+E GP DT   ++ P   +     G     +F TVPQ +LNNR++  + G+  GGSS+VNA LY+RG
Sbjct:    5 DYIIVGAGSAGCVLANRLSADPGKKVLLLEAGPPDTHPFIKMPAGMLELFKTGRH-HWHFTTVPQKHLNNREIMLYTGKTLGGSSSVNAMLYIRG 98

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: A0A7I8VRG8_9ANNE (DgyrCDS5984 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VRG8_9ANNE)

HSP 1 Score: 81.6 bits (200), Expect = 8.100e-16
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0

Query:    8 VDYVDCDFLIIGAGSSGCVLASRLVRQGLKVVL-VEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            +D    D++I+GAGS+GCVLA+RL   G + VL +E GP D+   +R P   M+   C D  +  + T+PQ N+NNR     RGR  GGSS++NA  YVRG
Sbjct:   27 IDKTVFDYVIVGAGSAGCVLANRLSEDGKRTVLSIEAGPKDSSWKIRMPAALMYNL-CDDTYNWYYHTIPQKNMNNRVFYWPRGRVWGGSSSLNAMAYVRG 126

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: UPI001EF506CD (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Mesorhizobium sp. IRAMC:0171 TaxID=2912854 RepID=UPI001EF506CD)

HSP 1 Score: 79.3 bits (194), Expect = 1.270e-15
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 0

Query:   14 DFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRGR 108
            D+++ GAGSSGC +A+RLV  G +V+L+E GP D  K +  P    FA   G + S  + + P++N+  R++P  +GR  GG S++NA LY+RG+
Sbjct:    6 DYIVAGAGSSGCTVANRLVTAGKRVLLLEAGPRDNDKFIHMPAT--FAKVIGTKRSFIYESEPETNVGGRRLPIPQGRTLGGGSSINAMLYIRGQ 98

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: A0A420ER19_9SPHN (Choline dehydrogenase n=1 Tax=Altericroceibacterium spongiae TaxID=2320269 RepID=A0A420ER19_9SPHN)

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-15
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0

Query:   12 DCDFLIIGAGSSGCVLASRLVRQ-GLKVVLVEGGPADTKKLLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            +CDF+++GAGS+GCVLASRL     +KVVL+E G +D   L+  P  WM  AS         MT P+ +++ R  P  RG+  GGSS++N ++Y+RG
Sbjct:    3 ECDFIVVGAGSAGCVLASRLSEDPSVKVVLLEAGGSDKHPLISMPMAWM-KASMEPRFGWGTMTEPEPHMDGRVQPLPRGKVLGGSSSINGTMYIRG 98

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: R7Y127_9ACTN (Glucose-methanol-choline oxidoreductase n=2 Tax=Nocardioides TaxID=1839 RepID=R7Y127_9ACTN)

HSP 1 Score: 80.5 bits (197), Expect = 2.050e-15
Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 0

Query:   12 DCDFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADTKKLLRPPHEWMFAASCGD-----ELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRG 107
            + D++++GAGS+GC +A RL   G  VVL+E G  DT  + + P   M A    +     +    F  VPQ+NLNNR+VPA RGR  GGSS+VN  ++VRG
Sbjct:   10 EADYVVVGAGSAGCAVAGRLADAGHSVVLLEAGGPDTSMMFKTPG--MIAMIHAEPKLKAKFDWGFYHVPQANLNNRKVPATRGRLMGGSSSVNGMIFVRG 108

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BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Match: A0A836CG94_9STRA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG94_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.100e-15
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 0

Query:   11 VDCDFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADTKKL--LRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVNASLYVRGR 108
            +DC++L++G+G++GC   SRLVRQG KVVL+  G  D  +   ++ P  ++     G  L +   + PQ  L  R+   F GRGGGGS+ +NA +Y+RGR
Sbjct:   16 LDCEYLVVGSGAAGCAFVSRLVRQGAKVVLLTDGSIDAFRDPGIQAPASFLSNLQRGWPLCDPHFSAPQPQLAGRRSLTFVGRGGGGSTLINACIYIRGR 115

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig17516.4149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G2G8_ECTSI	5.630e-33	66.02	Glucose-methanol-choline oxidoreductase n=2 Tax=Ec...	[more]
A0A0B5DTM4_9RHOB	2.940e-18	48.98	Glucose-methanol-choline oxidoreductase n=1 Tax=Ce...	[more]
A0A845A6J7_9SPHN	6.620e-17	47.42	Choline dehydrogenase n=1 Tax=Altericroceibacteriu...	[more]
L1JH16_GUITC	1.710e-16	43.88	GMC_OxRdtase_N domain-containing protein n=1 Tax=G...	[more]
UPI001C99A7C8	3.140e-16	47.37	GMC family oxidoreductase N-terminal domain-contai...	[more]
A0A7I8VRG8_9ANNE	8.100e-16	45.54	DgyrCDS5984 n=1 Tax=Dimorphilus gyrociliatus TaxID...	[more]
UPI001EF506CD	1.270e-15	42.11	GMC family oxidoreductase N-terminal domain-contai...	[more]
A0A420ER19_9SPHN	1.500e-15	44.33	Choline dehydrogenase n=1 Tax=Altericroceibacteriu...	[more]
R7Y127_9ACTN	2.050e-15	44.55	Glucose-methanol-choline oxidoreductase n=2 Tax=No...	[more]
A0A836CG94_9STRA	2.100e-15	41.00	GMC_OxRdtase_N domain-containing protein n=1 Tax=T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 14..107 e-value: 1.7E-24 score: 88.8
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 12..107
IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal	PFAM	PF00732	GMC_oxred_N	coord: 14..107 e-value: 5.5E-15 score: 55.5
None	No IPR available	GENE3D	3.30.560.10		coord: 50..88 e-value: 1.7E-24 score: 88.8
None	No IPR available	PANTHER	PTHR11552:SF147	CHOLINE DEHYDROGENASE, MITOCHONDRIAL	coord: 13..107
None	No IPR available	PANTHER	PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	coord: 13..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig17516	contig	H-paniculata_contig17516:195..521 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig17516.4149.1	mRNA_H-paniculata_contig17516.4149.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig17516 195..521 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig17516.4149.1 ID=prot_H-paniculata_contig17516.4149.1|Name=mRNA_H-paniculata_contig17516.4149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MPGGATWVDYVDCDFLIIGAGSSGCVLASRLVRQGLKVVLVEGGPADTKK
LLRPPHEWMFAASCGDELSENFMTVPQSNLNNRQVPAFRGRGGGGSSNVN
ASLYVRGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf
IPR000172	GMC_OxRdtase_N