prot_H-paniculata_contig17511.4148.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17511.4148.1
Unique Nameprot_H-paniculata_contig17511.4148.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig17511.4148.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 3.570e-14
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0 
Query:   20 QDQALEEKWAVRETARRRDMTQAQQEYGKLEGKLRKALSKVEARERGLKTREEAWRTE 77
            +D+ALE+KW  RE  RRR+++ AQ +Y KLEGKLRKALS+V ARER LK REE+W+T+
Sbjct: 1037 KDEALEQKWEAREATRRRELSHAQADYSKLEGKLRKALSEVGARERQLKAREESWKTD 1094
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BLAST of mRNA_H-paniculata_contig17511.4148.1 vs. uniprot
Match: A0A835Z851_9STRA (DUF3668 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z851_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 4.890e-6
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:   20 QDQALEEKWAVRETARRRDMTQAQQEYGKLEGKLRKALSKVEAR 63
            +D ALE++WA R   RRR + QAQ EY +LEGKLR+AL+ VE R
Sbjct:  942 KDAALEQRWAQRXAERRRSLAQAQAEYARLEGKLRRALTDVEVR 985
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17511.4148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXH9_ECTSI3.570e-1463.79Centrosomal protein 120 n=1 Tax=Ectocarpus silicul... [more]
A0A835Z851_9STRA4.890e-659.09DUF3668 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17511contigH-paniculata_contig17511:2975..5370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17511.4148.1mRNA_H-paniculata_contig17511.4148.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17511 2975..5470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17511.4148.1 ID=prot_H-paniculata_contig17511.4148.1|Name=mRNA_H-paniculata_contig17511.4148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MLLCIHVCDVVWLFCCGGRQDQALEEKWAVRETARRRDMTQAQQEYGKLE
GKLRKALSKVEARERGLKTREEAWRTE
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