mRNA_H-paniculata_contig1751.4147.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: D7FPC3_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC3_ECTSI) HSP 1 Score: 382 bits (980), Expect = 1.110e-123 Identity = 217/339 (64.01%), Postives = 257/339 (75.81%), Query Frame = 1
Query: 1 FPLAEYMKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHVMPGSAAAKGHKASPAVVAAGSSMASVIXXXXXXXXXXXXXXXGG-------GTRSVIVQQVADLVASSTNELRVVVISASDIVPTEAPGAGVDCDPYCVLEVLPEGSRMKEGAAENTKYKTVCKTGTANPVWNEGVTIPQVQHLDAKLVVTVCNKRAMGRDQCLGKIEVPLSDEAIRAGPADIVKALSAAEGSEGFATGDLRITVHL 996
F L +YM+++EA YGGSRA+WFL +F ++ +L+ +GG+ALIAN++GF YPAFASFKAIDSPDA AS Q LSYW IFGAFFT E+ V+ AIPYY++ K VY FHP+TRGAT +YD +IRPLVIQHV+PGS+ AK +A P+ XXXXXXXXXXXX T + V A V+ +ELRVVV+SASD+VPTEAPGAGVDCDPYCVLEVLPEG+R+K+GAAENTKYKTVCKTGTANPVWNEGVTIPQV+HLDAKLVVTVCNKRAMGRDQCLGKIEVPLS P D+V +L+ A+G+ A GDLR+TV L
Sbjct: 25 FCLTKYMRQMEANYGGSRASWFLGLFSIVTVILYFIGGLALIANLIGFCYPAFASFKAIDSPDALASQQLLSYWVIFGAFFTLETSFSVLTAAIPYYSIAKGFIFVYSFHPFTRGATHLYDVVIRPLVIQHVLPGSSQAK--RAPPSAXXXXXXXXXXXXXXXXXXXXXXXSSPVPEFAERVMSTGAPAVTVPAGFVSPDLSELRVVVVSASDVVPTEAPGAGVDCDPYCVLEVLPEGTRLKQGAAENTKYKTVCKTGTANPVWNEGVTIPQVEHLDAKLVVTVCNKRAMGRDQCLGKIEVPLSSVKGAMEPRDMVMSLATADGATEPACGDLRVTVQL 361
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A7S2UZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD4_9STRA) HSP 1 Score: 143 bits (360), Expect = 5.130e-34 Identity = 97/292 (33.22%), Postives = 147/292 (50.34%), Query Frame = 1
Query: 19 MKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHVMPGSAAAKGHKASPAVVAAGSSMASVIXXXXXXXXXXXXXXXGGGTRSVIVQQVADLVASSTNELRVVVISASDIVPTEAPGAGVDCDPYCVLEV-LPEGSRMKEGAAENTKYKTVCKTGTANPVWNEGVTIPQVQHLDAKLVVTVCNKRAMGRDQCLGKIEVPLS 891
MK+ E G S+A F +++ + + G + +++ +LYPA AS++AI P QWL+YW IFG E +V IP Y +++ L++C+HP T GA++VY RP ++Q ++P S AA KA AG + S GG A V++ T L V V++A ++ P +G DPYC+L + P G + E YKT CK T +P WNE + + ++ LD KLVVTV +K+++G D +GK+EV LS
Sbjct: 33 MKDFEKMVGFSKAYIFSASVIILMLIAYVFFGKTFMGDIIAYLYPALASWRAIKQPSPDNRRQWLTYWVIFGMCSLCEKFLHFLVSWIPLYFFIRLGFLIWCYHPKTLGASVVYGAT-RPHLLQ-LLPASTAAPSTKAK-----AGGAKKS------------------GGAGEAAPAPSASTVSAGT--LNVTVVAAENL-PVMELFSGTS-DPYCLLRMDPPAGEKRAPRGVEKISYKTTCKPKTLSPSWNERIVLKPLESLDGKLVVTVMDKQSVGMDDFIGKVEVKLS 295
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A1W0AAL7_9STRA (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0AAL7_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.520e-25 Identity = 58/134 (43.28%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 19 MKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHVMPGSAAAK 420
+KELEA+ G + FL+ + LLF +GG +LI+N+VGF+YPA+ SFKA+++ D++ QWL+YW ++ AF E + + IP+Y LK+A LV+C+HP T GA +Y ++I+P +I HV AA K
Sbjct: 21 LKELEAQIGVEKFYIFLVGALIAGVLLFVIGGASLISNLVGFIYPAYMSFKALNTNDSNDDTQWLTYWVVYSAFNLTEQFTDIFLSWIPFYFFLKIAFLVWCYHPSTLGANTIYQSVIKPNLIGHVEKIDAALK 154
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A7S2HJA8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HJA8_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.850e-24 Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 13 EYMKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHV 396
E++KELE K G +R +FLL ++ A+ F +GG L+ ++V F+YPA+ SFKAIDS QWL+YW +FG F FE +V IP+Y M+K+ ++ +HP GA LVY +I+P ++ ++
Sbjct: 27 EHLKELEKKTGYNRVYFFLLFSALLSAITFLLGGAKLVTDLVSFVYPAYMSFKAIDSGSPTEDTQWLTYWVVFGFFSIFEGTLTFLVEMIPFYFMIKVGFFIWLYHPKFLGAALVYSQVIKPAIVPYL 154
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A7R9VWU9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VWU9_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.590e-24 Identity = 54/128 (42.19%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 13 EYMKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHV 396
E +KELE K G S+ +F+ F++ +LL+ +GG L++++V FLYPA+ SFK IDS D +AQWL+YW +FG E+ C +V IP Y +LK+A ++ +HP T GA ++Y +RPL++ ++
Sbjct: 28 EKLKELEVKTGYSKVYFFMFFSFLLGSLLYLIGGPKLVSDLVSFLYPAYMSFKTIDSADGADNAQWLTYWVVFGVISIVETCCSFLVTWIPLYFVLKIAFFIWLWHPKTLGAGVIYTQALRPLLMPYL 155
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A7S4IT74_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT74_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.380e-22 Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = 1
Query: 7 LAEYMK--ELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHV 396
L +Y K E+E K G S+ +F L ++ +++ +GG LI+++V FLYPA+ SFK IDS D+ AQWL+YW +FG E+ C +V IP Y +LK+A ++ +HP T GA +VY +RPL++ ++
Sbjct: 24 LFQYKKLAEIEKKTGHSKVYFFFLFSTLLSTVIYLLGGPKLISDLVSFLYPAYMSFKTIDSEDSEGDAQWLTYWVVFGVISILETCCSFLVSWIPLYFVLKIAFFIWLWHPKTLGAGVVYTQALRPLLLPYL 155
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: K0S5M7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5M7_THAOC) HSP 1 Score: 103 bits (257), Expect = 3.160e-22 Identity = 50/119 (42.02%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 19 MKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIR 375
++ELE K G + +F+L V+ +++F +GGM L+++++GF YPA+ SFKAIDSPD QWL+YW IF F E++ +V IP+Y ++K+A + +HP GATL+Y I++
Sbjct: 28 LRELEKKTGQPKVYFFVLFVGVITSVIFGLGGMKLVSDLMGFAYPAYMSFKAIDSPDPTDDTQWLTYWCIFALFSITENVMSFLVEWIPFYYVIKVAFFTWLYHPKFNGATLMYKQIVQ 146
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A5D6Y4J6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4J6_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.220e-22 Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 25 ELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHVMPGSAAAK 420
ELE + G + F+ + LLF +GG LI ++VGF+YPA+ SFKAI +P+A QWL+YW ++ F ES+ +++ IP+Y +K+ LV+C+HP T G+ ++Y+T+I+P V HV AA K
Sbjct: 23 ELEKQTGVDKFYIFIAGAVLSGILLFVVGGAQLIVSLVGFIYPAYQSFKAISTPNAEDDTQWLTYWVVYAFFNITESVTDLVLSWIPFYFFVKVGFLVWCYHPSTVGSNVIYNTLIKPYVAPHVSSIDAALK 154
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A662WGD3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGD3_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.840e-22 Identity = 50/124 (40.32%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 25 ELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHV 396
ELE + G + F + + LLF +GG L+ +VGF+YPA+ SFKAI +P+++ QWL+YW ++ F ES+ +++ IP+Y +K+A LV+C+HP T G+ ++Y+T+I+P V HV
Sbjct: 23 ELEKQTGVDKFYIFCVGTLLAGILLFVVGGEELVVGLVGFIYPAYMSFKAISTPNSNDDTQWLTYWVVYAFFNLTESVTDLVLSWIPFYFFIKVAFLVWCYHPSTAGSNVIYNTLIKPYVAPHV 146
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Match: A0A7S2F8X6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8X6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.250e-21 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 7 LAEYMKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFKAIDSPDAHASAQWLSYWSIFGAFFTFESMCWVIVPAIPYYNMLKMAALVYCFHPYTRGATLVYDTIIRPLVIQHVM 399
L E K + K A L+ +++ALL G LI N++GF YPA SFKAIDS D+ QWLSYW I+G+F E ++ AI Y+ + KM L++C+HP T+GAT VY+ ++ P V+ H+M
Sbjct: 28 LDELEKTTKYKKAHIVGAVILIPVLLILALL---GASRLIINLLGFAYPALQSFKAIDSKDSKTDTQWLSYWIIYGSFSIIEHAFVYVINAIMYFPIFKMGFLIWCYHPSTQGATTVYEKVLAPYVVPHLM 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1751.4147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1751.4147.1 >prot_H-paniculata_contig1751.4147.1 ID=prot_H-paniculata_contig1751.4147.1|Name=mRNA_H-paniculata_contig1751.4147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=328bp MKELEAKYGGSRAAWFLLVFFVMIALLFAMGGMALIANVVGFLYPAFASFback to top mRNA from alignment at H-paniculata_contig1751:2..9080- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1751.4147.1 ID=mRNA_H-paniculata_contig1751.4147.1|Name=mRNA_H-paniculata_contig1751.4147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9079bp|location=Sequence derived from alignment at H-paniculata_contig1751:2..9080- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1751:2..9080- >mRNA_H-paniculata_contig1751.4147.1 ID=mRNA_H-paniculata_contig1751.4147.1|Name=mRNA_H-paniculata_contig1751.4147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at H-paniculata_contig1751:2..9080- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |