prot_H-paniculata_contig1750.4145.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1750.4145.1
Unique Nameprot_H-paniculata_contig1750.4145.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length952
Homology
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BLAST of mRNA_H-paniculata_contig1750.4145.1 vs. uniprot
Match: D7FWY9_ECTSI (N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.010e-6
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:  315 LPTVETVRAELRAAGHPCSGSHIDPRAIKTHAPFCAVEAALQRAK 359
            LP+VE VR +LR+AGH CSGSH DPRAIKT AP  AV  A+ RA+
Sbjct:  275 LPSVEAVREQLRSAGHECSGSHADPRAIKTKAPLEAVREAIFRAR 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1750.4145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWY9_ECTSI2.010e-666.67N2,N2-dimethylguanosine tRNA methyltransferase n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042296tRNA methyltransferase, Trm1, C-terminalGENE3D3.30.56.70coord: 308..357
e-value: 1.9E-5
score: 26.3
IPR002905tRNA methyltransferase, Trm1PFAMPF02005TRMcoord: 263..355
e-value: 9.1E-5
score: 21.8
IPR002905tRNA methyltransferase, Trm1PANTHERPTHR10631N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASEcoord: 261..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1750contigH-paniculata_contig1750:7835..24204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1750.4145.1mRNA_H-paniculata_contig1750.4145.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1750 311..24204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1750.4145.1 ID=prot_H-paniculata_contig1750.4145.1|Name=mRNA_H-paniculata_contig1750.4145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=952bp
MSPYSSSTTMCSGVGTSLERTAKASTSREQKFRWRDGGRGSGGGGGGIGC
EKEEDNRARTHRKKNQNTDKTEAFLALGPFWPGPLFHSRFLAAVLEGLTE
TTSATADSTVVAAAPAAQPADKNIPLLQPLPSADIAQGMASTSELRHPLN
AKRATPMPVLGSIGMTETSRVSELLGSEGWGEEDGGAREITAVLPPDSRT
TRTVGITSIERSTEGKGETQATQREVRGDDGRASIVAQKAGGGSRPQWAH
SNRPWEPPVGVSTRRQLRFLLESLSAELEDCPLFYSLPDVAAAASSSREL
GASKTRRKRRAAKHLPTVETVRAELRAAGHPCSGSHIDPRAIKTHAPFCA
VEAALQRAKVPQPNETSMLKQTRNEEEGHVLSLSLSKNEPTSATAVTSGT
TTTPAMLGSLKAARARIGATTTASAPRNAPVDVIEICAVTPVPPPPLPTI
TAMGGRPEKKETPTSADRHPRHPSSTPSYREEYGKHDDRHDKDIVSLGVE
VAVKGGGGEGGRRRVSATAGQSGARPDSPSRINSPTSAKREKSACSTLRR
TEDRGSSATGLVLESESSHWRMRVGNANAGPRVPVGRPTADAAAAAAVDK
GVLHLSVTALKDFVEESLFLLRTVANYLPVDDAVDATPISRAVAGAAMDD
DDDDGGGGGDSACDGRKKTSTQVAATAVAAVAVGKRQDDVSVFVVRWRGR
RATATGSVGSSGSSVGSEGLAEGARSGRDGGGNGSRNRVEGDRKQVDEIE
QALGNRFLGRVSFFDTLIDACAAANRDGLAATAGRIVVLLGGIHDAGEGG
VCLSGAGSKLVGAVGPDGRLPVVLGRPRTHAIRCTGDGVIIQSISVRGGG
AEECSFASTSSASTLTGTTITYDPSISVAGVAASAAPRTKAKEEEPAASV
AKAASSTGHVLGRGGVCSREGGVNRGRAMARKRPRLVFDHIAAQVNGPFA
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042296tRNA_met_Trm1_C
IPR002905Trm1