prot_H-paniculata_contig17490.4138.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17490.4138.1
Unique Nameprot_H-paniculata_contig17490.4138.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length214
Homology
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: D8LEI3_ECTSI (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI3_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 3.240e-120
Identity = 166/214 (77.57%), Postives = 174/214 (81.31%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLREGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHLLERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDFRC 214
            MPQNEFVIATKSPSADVCVFDISKHPSVPP+NSGC+PEHRCKGHTKEGYGLSWNPHVEGRLLSGSDD LVCYWD++  GQTVDATQKFE                                TS +GSKPTTV+ +PMHLLERH SE GDGEVLGVQWA FDETILGSCSADRRVKVWSLSRIGEEQ+PEDAEDGPPELLFIHGGHTSRVGDFRC
Sbjct:   42 MPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKFEGHTSVVGDVAWHQQNPKLLGSVGDDRQLLFWDTSMDGSKPTTVIKDPMHLLERHGSEAGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFRC 255
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 4.630e-108
Identity = 164/250 (65.60%), Postives = 173/250 (69.20%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLREGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPE--------------------------------------PMHLLERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQNEFVIATKSPSADVCVFDISKHPSVPP+NSGC+PEHRCKGHTKEGYGLSWNPHVEGRLLSGSDD LVCYWD++  GQTVDATQKFE                                TS +GSKPTTV+ +                                      PMHLLERH+SE GDGEVLGVQWA FDETILGSCSADRRVKVWSLSRIGEEQ+PEDAEDGPPELLFIHGGHTSRVGDF
Sbjct:  204 MPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKFEGHTSVVGDVAWHQQNPKLLGSVGDDRQLLFWDTSMDGSKPTTVIKDAHSANINCLAFNPFSEFLLATGSSDTTVALWDMRNMGKPMHLLERHSSEAGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDF 453
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A3L7I9Y9_CRIGR (RBBP4 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A3L7I9Y9_CRIGR)

HSP 1 Score: 195 bits (496), Expect = 2.220e-57
Identity = 105/227 (46.26%), Postives = 131/227 (57.71%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-STNGSKPTTVVP----EPMHL-------LERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+PS+DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    + G+ VDA   F                                 T S N SKP+  V     E + L       L+ H+ E    E+  VQW+P +ETIL S   DRR+ VW LS+IGEEQ+PEDAEDGPPELLFIHGGHT+++ DF
Sbjct:  133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAETVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 359
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: S9XGN8_CAMFR (Histone-binding protein RBBP4 n=1 Tax=Camelus ferus TaxID=419612 RepID=S9XGN8_CAMFR)

HSP 1 Score: 196 bits (498), Expect = 1.190e-55
Identity = 100/217 (46.08%), Postives = 125/217 (57.60%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMH--LLERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+PS+DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    + G+ VDA   F                                     GS   TV    +    L+ H+ E    E+  VQW+P +ETIL S   DRR+ VW LS+IGEEQ+PEDAEDGPPELLFIHGGHT+++ DF
Sbjct:  378 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 594
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: UPI0005D37A4D (WD-40 repeat-containing protein MSI1 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D37A4D)

HSP 1 Score: 189 bits (479), Expect = 3.280e-55
Identity = 100/214 (46.73%), Postives = 118/214 (55.14%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLREGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHLLERHTSEVG--DGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+  +DV VFD  KHPS  P    C P+ R +GHT EGYGLSWNPH EG LLSGSDDSL+C WD+     T+   Q  E                                        +++  +P+  +  H +EV    GEV  V W P  ETIL S  ADRRV VW L RIGEEQA EDAEDGPPELLF+HGGHT ++ DF
Sbjct:  120 MPQNSRIIATKTIHSDVFVFDYGKHPSRTPPGGSCSPDLRLRGHTMEGYGLSWNPHKEGYLLSGSDDSLICLWDI----STMPQQQVLEAKEVYDVHEGVVGDLSWHLKHEYLFGSVGEDCRLNIWDLRSSLPKKPLQSILAHQAEVRICRGEVYEVAWNPKSETILASSGADRRVMVWDLDRIGEEQAAEDAEDGPPELLFVHGGHTDKISDF 329
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: G5B5J6_HETGA (Histone-binding protein RBBP4 n=1 Tax=Heterocephalus glaber TaxID=10181 RepID=G5B5J6_HETGA)

HSP 1 Score: 187 bits (475), Expect = 3.460e-54
Identity = 100/239 (41.84%), Postives = 128/239 (53.56%), Query Frame = 0 
Query:    1 MPQNEFVIATKSP-----------SADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHLLERHTSEV-------------GDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+P           S+DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    + G+ VDA   F                                 T +N +       +P H ++ HT++V               G    VQW+P +ETIL S   DRR+ VW LS+IGEEQ+PEDAEDGPPELLFIHGGHT+++ DF
Sbjct:  133 MPQNPCIIATKTPPQNRXXXXXXXSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS------KPSHSVDAHTADVTCLSFNPYSEFILATGSADKVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 365
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A556U5T8_BAGYA (Histone-binding protein RBBP7 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556U5T8_BAGYA)

HSP 1 Score: 185 bits (470), Expect = 4.960e-54
Identity = 96/217 (44.24%), Postives = 125/217 (57.60%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMH--LLERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+P++DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    + G+ +DA   F                                  + +   P TV    +    L+ H+ E    E+  VQW+P +ETIL S   DRR+ VW LS+IGEEQ+ EDAEDGPPELLFIHGGHT+++ DF
Sbjct:   95 MPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIIDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIELWTIDF--PLTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 309
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BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A1I8F5C9_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8F5C9_9PLAT)

HSP 1 Score: 192 bits (488), Expect = 5.320e-54
Identity = 101/230 (43.91%), Postives = 128/230 (55.65%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLREGGQTV--DAT---------------QKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHL-LERHTSEVGDGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+PS+DV +FD +KHPS P  +  C+PE R KGH KEGYGLSWNP++E  LLS SDD  +C WD   G  +V  D +               QK                                   +T  +  T  + +  +L L+ H+ E    E+  VQW+P +ETIL S   DRR+ VW LS+IGEEQAPEDAEDGPPELLFIHGGHT+++ DF
Sbjct:   83 MPQNPTIIATKTPSSDVLIFDYTKHPSKPDPSGECRPEIRLKGHQKEGYGLSWNPNIEAHLLSASDDHTICLWDCSRGHSSVVEDVSWHLLHDRIFGSVGDDQKLMIWDTRAKSSSKPTHSVEAHTAEVNCLSFNPFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQAPEDAEDGPPELLFIHGGHTAKISDF 312
[Close]
BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A5N5TJX5_9CRUS (Putative histone-binding protein Caf1 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5TJX5_9CRUS)

HSP 1 Score: 184 bits (467), Expect = 2.950e-53
Identity = 96/228 (42.11%), Postives = 123/228 (53.95%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHLLERHTSEVG-------------DGEVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  VIATK+PS+DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    +  + +DA   F                                 T +N +       +P H ++ HT+EV               G    VQW+P +   L S   DRR+ VW LS+IGEEQ+ EDAEDGPPELLFIHGGHT+++ DF
Sbjct:  136 MPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNNTN------KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKVQWSPHNXXXLASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 357
[Close]
BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Match: A0A5F4VRT4_CALJA (RB binding protein 4, chromatin remodeling factor n=5 Tax=Gnathostomata TaxID=7776 RepID=A0A5F4VRT4_CALJA)

HSP 1 Score: 182 bits (461), Expect = 2.740e-52
Identity = 97/226 (42.92%), Postives = 126/226 (55.75%), Query Frame = 0 
Query:    1 MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDSLVCYWDLR---EGGQTVDATQKFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTNGSKPTTVVPEPMHLLERHTSEVGDGEVLGVQWAPFDETILGSCSAD-----------RRVKVWSLSRIGEEQAPEDAEDGPPELLFIHGGHTSRVGDF 212
            MPQN  +IATK+PS+DV VFD +KHPS P  +  C P+ R +GH KEGYGLSWNP++ G LLS SDD  +C WD+    + G+ VDA   F                                 T +N +       +P H ++ HT+EV       + + P+ E IL + SAD           RR+ VW LS+IGEEQ+PEDAEDGPPELLFIHGGHT+++ DF
Sbjct:  133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS------KPSHSVDAHTAEVNC-----LSFNPYSEFILATGSADKVKIFYLNGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 347
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17490.4138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEI3_ECTSI3.240e-12077.57CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JAT4_9PHAE4.630e-10865.60CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A3L7I9Y9_CRIGR2.220e-5746.26RBBP4 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0... [more]
S9XGN8_CAMFR1.190e-5546.08Histone-binding protein RBBP4 n=1 Tax=Camelus feru... [more]
UPI0005D37A4D3.280e-5546.73WD-40 repeat-containing protein MSI1 n=1 Tax=Ambor... [more]
G5B5J6_HETGA3.460e-5441.84Histone-binding protein RBBP4 n=1 Tax=Heterocephal... [more]
A0A556U5T8_BAGYA4.960e-5444.24Histone-binding protein RBBP7 n=1 Tax=Bagarius yar... [more]
A0A1I8F5C9_9PLAT5.320e-5443.91Uncharacterized protein n=1 Tax=Macrostomum lignan... [more]
A0A5N5TJX5_9CRUS2.950e-5342.11Putative histone-binding protein Caf1 n=2 Tax=Arma... [more]
A0A5F4VRT4_CALJA2.740e-5242.92RB binding protein 4, chromatin remodeling factor ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..74
e-value: 7.2E-5
score: 32.2
coord: 81..121
e-value: 1.5E-5
score: 34.5
coord: 133..178
e-value: 6.2E-4
score: 29.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 136..178
e-value: 0.039
score: 14.8
coord: 86..121
e-value: 0.003
score: 18.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..83
score: 10.341
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 88..130
score: 9.573
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..148
e-value: 1.7E-40
score: 141.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 149..213
e-value: 2.6E-7
score: 31.7
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 1..147
NoneNo IPR availablePANTHERPTHR22850:SF82HISTONE-BINDING PROTEIN RBBP7coord: 140..212
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 140..212
NoneNo IPR availablePANTHERPTHR22850:SF82HISTONE-BINDING PROTEIN RBBP7coord: 1..147
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 41..187
score: 16.216
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17490contigH-paniculata_contig17490:411..3309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17490.4138.1mRNA_H-paniculata_contig17490.4138.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17490 411..3309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17490.4138.1 ID=prot_H-paniculata_contig17490.4138.1|Name=mRNA_H-paniculata_contig17490.4138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MPQNEFVIATKSPSADVCVFDISKHPSVPPANSGCKPEHRCKGHTKEGYG
LSWNPHVEGRLLSGSDDSLVCYWDLREGGQTVDATQKFEGHTSVIGDVAW
HQHNPKLFGSVGDDKQLLFWDTSTNGSKPTTVVPEPMHLLERHTSEVGDG
EVLGVQWAPFDETILGSCSADRRVKVWSLSRIGEEQAPEDAEDGPPELLF
IHGGHTSRVGDFRC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf