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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1036 |
| Cds size | 1026 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17478.4134.1 >prot_H-paniculata_contig17478.4134.1 ID=prot_H-paniculata_contig17478.4134.1|Name=mRNA_H-paniculata_contig17478.4134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MISTFAQMDAVHGSPPVPRRLHAPLSGSTVSLAGTTSPTKTLAQREVSPI
VLGSPDIRNDLASALRVTGLELPPTLMESGTESGETGVLHNPVRVACSST
TSEVSHQLPPIATATSEAMGLGAWTGDVEPREARHVSSSNSTTVALSSSP
ESVCSVGDDINHLQEDASMLDYLGDAAAAAVASGAATFRMGLPHLLLDDD
HNSHAINNRAINFDDRLLHDDRCRRSFGVDGIGGVDVCSLRNADLSSKRS
SVYSRLFMAAHNNDTHQQHLQRSVPSRRYPRSTSPNVVSRADGAAATNTL
GQVSQQRQEQRQQQSSSPPLHHTPKGSRVPESNKNVSQEGQG back to topmRNA from alignment at H-paniculata_contig17478:4282..5381- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17478.4134.1 ID=mRNA_H-paniculata_contig17478.4134.1|Name=mRNA_H-paniculata_contig17478.4134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1100bp|location=Sequence derived from alignment at H-paniculata_contig17478:4282..5381- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGACGGTGATGATATCGACCTTCGCCCAGATGGATGCTGTTCATGGCAGC
CCACCTGTGCCGCGTCGGTTACATGCCCCCCTCTCTGGGTCCACAGTTTC
GCTGGCGGGTACGACGTCACCGACCAAAACGCTCGCCCAGCGAGAAGTCT
CTCCTATCGTACTGGGCTCGCCGGATATACGGAACGACCTGGCGTCGGCA
CTGCGGGTAACGGGCTTAGAGCTACCACCTACCCTGATGGAGTCCGGCAC
TGAAAGTGGGGAAACTGGCGTGTTGCACAACCCTGTCAGGGTCGCCTGCT
CCTCAACTACGAGCGAAGTGTCCCACCAGTTACCTCCCATTGCTACAGCC
ACGTCGGAGGCGATGGGGCTGGGGGCATGGACGGGGGACGTGGAACCCCG
CGAGGCGCGGCACGTGAGCAGCAGCAACTCGACCACGGTCGCGCTCAGCT
CATCGCCGGAGTCTGTCTGTAGCGTCGGCGATGATATAAATCATTTGCAG
GAGGACGCGAGTATGCTGGACTATCTAGGGGATGTTTTTCATCTCGCCAC
GGTCTCTGAGTATTTGGAGGATAGCGGTAACGGAATGGGAGGGGACGAGG
CGGCGGCGGCAGCGGTAGCTTCAGGCGCGGCGACATTTAGAATGGGTCTG
CCGCATTTGCTGCTGGACGATGACCACAACAGCCATGCCATCAACAACCG
CGCCATAAACTTCGACGATCGTTTGTTGCATGACGACAGATGCAGGCGCA
GCTTTGGGGTGGATGGGATAGGTGGGGTGGACGTTTGCTCTCTCCGAAAC
GCCGACTTGAGTAGCAAGCGTAGTAGCGTTTACTCCCGCTTGTTCATGGC
CGCGCACAACAATGACACCCACCAACAGCACCTGCAGCGATCGGTTCCAT
CGAGACGATACCCCCGCTCAACCTCCCCAAACGTGGTCTCGCGCGCTGAT
GGTGCTGCCGCCACCAATACACTTGGTCAAGTTTCACAGCAGCGACAAGA
ACAACGACAACAACAATCGTCGTCGCCGCCGCTGCATCATACTCCCAAGG
GATCGCGTGTACCGGAAAGCAACAAGAACGTCAGCCAGGAGGGTCAGGGC
back to topCoding sequence (CDS) from alignment at H-paniculata_contig17478:4282..5381- >mRNA_H-paniculata_contig17478.4134.1 ID=mRNA_H-paniculata_contig17478.4134.1|Name=mRNA_H-paniculata_contig17478.4134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig17478:4282..5381- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATATCGACCTTCGCCCAGATGGATGCTGTTCATGGCAGCCCACCTGT
GCCGCGTCGGTTACATGCCCCCCTCTCTGGGTCCACAGTTTCGCTGGCGG
GTACGACGTCACCGACCAAAACGCTCGCCCAGCGAGAAGTCTCTCCTATC
GTACTGGGCTCGCCGGATATACGGAACGACCTGGCGTCGGCACTGCGGGT
AACGGGCTTAGAGCTACCACCTACCCTGATGGAGTCCGGCACTGAAAGTG
GGGAAACTGGCGTGTTGCACAACCCTGTCAGGGTCGCCTGCTCCTCAACT
ACGAGCGAAGTGTCCCACCAGTTACCTCCCATTGCTACAGCCACGTCGGA
GGCGATGGGGCTGGGGGCATGGACGGGGGACGTGGAACCCCGCGAGGCGC
GGCACGTGAGCAGCAGCAACTCGACCACGGTCGCGCTCAGCTCATCGCCG
GAGTCTGTCTGTAGCGTCGGCGATGATATAAATCATTTGCAGGAGGACGC
GAGTATGCTGGACTATCTAGGGGATATGATATCGACCTTCGCCCAGATGG
ATGCTGTTCATGGCAGCCCACCTGTGCCGCGTCGGTTACATGCCCCCCTC
TCTGGGTCCACAGTTTCGCTGGCGGGTACGACGTCACCGACCAAAACGCT
CGCCCAGCGAGAAGTCTCTCCTATCGTACTGGGCTCGCCGGATATACGGA
ACGACCTGGCGTCGGCACTGCGGGTAACGGGCTTAGAGCTACCACCTACC
CTGATGGAGTCCGGCACTGAAAGTGGGGAAACTGGCGTGTTGCACAACCC
TGTCAGGGTCGCCTGCTCCTCAACTACGAGCGAAGTGTCCCACCAGTTAC
CTCCCATTGCTACAGCCACGTCGGAGGCGATGGGGCTGGGGGCATGGACG
GGGGACGTGGAACCCCGCGAGGCGCGGCACGTGAGCAGCAGCAACTCGAC
CACGGTCGCGCTCAGCTCATCGCCGGAGTCTGTCTGTAGCGTCGGCGATG
ATATAAATCATTTGCAGGAGGACGCGAGTATGCTGGACTATCTAGGGGAT
GCGGCGGCGGCAGCGGTAGCTTCAGGCGCGGCGACATTTAGAATGGGTCT
GCCGCATTTGCTGCTGGACGATGACCACAACAGCCATGCCATCAACAACC
GCGCCATAAACTTCGACGATCGTTTGTTGCATGACGACAGATGCAGGCGC
AGCTTTGGGGTGGATGGGATAGGTGGGGTGGACGTTTGCTCTCTCCGAAA
CGCCGACTTGAGTAGCAAGCGTAGTAGCGTTTACTCCCGCTTGTTCATGG
CCGCGCACAACAATGACACCCACCAACAGCACCTGCAGCGATCGGTTCCA
TCGAGACGATACCCCCGCTCAACCTCCCCAAACGTGGTCTCGCGCGCTGA
TGGTGCTGCCGCCACCAATACACTTGGTCAAGTTTCACAGCAGCGACAAG
AACAACGACAACAACAATCGTCGTCGCCGCCGCTGCATCATACTCCCAAG
GGATCGCGTGTACCGGAAAGCAACAAGAACGTCAGCCAGGAGGGTCAGGG
CGCGGCGGCGGCAGCGGTAGCTTCAGGCGCGGCGACATTTAGAATGGGTC
TGCCGCATTTGCTGCTGGACGATGACCACAACAGCCATGCCATCAACAAC
CGCGCCATAAACTTCGACGATCGTTTGTTGCATGACGACAGATGCAGGCG
CAGCTTTGGGGTGGATGGGATAGGTGGGGTGGACGTTTGCTCTCTCCGAA
ACGCCGACTTGAGTAGCAAGCGTAGTAGCGTTTACTCCCGCTTGTTCATG
GCCGCGCACAACAATGACACCCACCAACAGCACCTGCAGCGATCGGTTCC
ATCGAGACGATACCCCCGCTCAACCTCCCCAAACGTGGTCTCGCGCGCTG
ATGGTGCTGCCGCCACCAATACACTTGGTCAAGTTTCACAGCAGCGACAA
GAACAACGACAACAACAATCGTCGTCGCCGCCGCTGCATCATACTCCCAA
GGGATCGCGTGTACCGGAAAGCAACAAGAACGTCAGCCAGGAGGGTCAGG
GC back to top
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