prot_H-paniculata_contig17467.4132.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig17467.4132.1
Unique Name	prot_H-paniculata_contig17467.4132.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	133

Homology

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BLAST of mRNA_H-paniculata_contig17467.4132.1 vs. uniprot
Match: D7G7I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I1_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.380e-9
Identity = 44/81 (54.32%), Postives = 48/81 (59.26%), Query Frame = 0

Query:    1 MDCEVDQALFKIAKEREQLEKELEALSNELKAAYAKAAMGGRELTAAEVDRGDALVNN--GDVSMTGGSGDIQRRSGGLTG 79
            MD EVDQAL KIA ERE+LEKELEALSN+LK AYAKAAM G      + D   A V    G VS   G   +  R G   G
Sbjct:   96 MDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAG----GGDADSSSATVTGVEGVVSSFSGMDVVGERQGDAMG 172

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BLAST of mRNA_H-paniculata_contig17467.4132.1 vs. uniprot
Match: A0A6H5JD54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD54_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.470e-8
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 0

Query:    1 MDCEVDQALFKIAKEREQLEKELEALSNELKAAYAKAAMGG--------RELTAAEVDRGDAL 55
            MD EVDQAL KIA ER++LEKELEALSNELK AYAKAAM G          +T  E  +GDA+
Sbjct:  150 MDLEVDQALAKIATERKELEKELEALSNELKGAYAKAAMAGGGDADSSSATVTGVEKRQGDAM 212

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig17467.4132.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig17467.4132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G7I1_ECTSI	4.380e-9	54.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JD54_9PHAE	1.470e-8	61.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..36

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig17467	contig	H-paniculata_contig17467:3051..3449 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig17467.4132.1	mRNA_H-paniculata_contig17467.4132.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig17467 414..4556 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig17467.4132.1 ID=prot_H-paniculata_contig17467.4132.1|Name=mRNA_H-paniculata_contig17467.4132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MDCEVDQALFKIAKEREQLEKELEALSNELKAAYAKAAMGGRELTAAEVD
RGDALVNNGDVSMTGGSGDIQRRSGGLTGSADLHGSSGGTSESRDIAISG
EGVGKGEDRLDSSGSVLEGERMCIQGGQEAPR*