prot_H-paniculata_contig1743.4122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1743.4122.1
Unique Nameprot_H-paniculata_contig1743.4122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1182
Homology
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 907 bits (2343), Expect = 4.400e-311
Identity = 566/845 (66.98%), Postives = 632/845 (74.79%), Query Frame = 0
Query:  377 GVPVYVHGSDSYNIPIQHTYALNG-ESYGQSVVGHVP-----AHGLGQMQGPQSAGLEGLGSGDDQLLSAHMSGMSSPSHPSVPAPQHVYMPAPGTYMVPGGNGAGSNGSAXXXXXXXXXXXXXXXXXXXHVQHGAGGLQQPMVLFGHQPQANGPXXXXXXXXXXXXXXLQSSHPAAGSGAESGAHASASPMYLPITQAGYQYVPPHLSHLQSASGVPIYQMA-PGLDGSQAAGRPNGVVAASPAGAPASTGSAS-----GRGSTGTPQLASPSSGAPPAQSFQVHYALTPQGIVPMVPIMPNGAGGFTNPALYPGIGGVFDDGRGS-IGTIAGITGGVD-----GVDKGRMSPPLAGGGAAIPARFAGSP-HPHATSQHLHAGIPGAIQ------PMHAPAWSVAG-VHEAGP-----YHDGGRFNDRGYPGGAPEGFRGG---PGG------RDARMAPRDAEAGKDVKDRRKRLDRESDMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 1181
            G+P+Y   SD   +      A+NG ++YGQ VV H P     AH L Q  G  +  + G+G    QLL+ HM+ M SP  P + APQ  YMP+ GTY+V  G+G GS    XXXXXXXXXXXXXXXX             QPMVL+  Q   NG       XXXXXX     +  AA          +ASPM+LP++QAGY YVP  ++HLQ+A GVP+YQMA  G+DG QA  R NG  +                   GR S  +P +ASP  GAP  QSFQVHYA+TPQGIVPMVP++PNGAGGFTNPALYPG+G ++DDGR + +G + G++  +D     GV+KGR+SPPL       P RF+GSP HP     H+H   PG +Q      PMHAPAWSV G VH+ G      Y D G     GY  G+  G+RGG   PGG      R AR A R+ EAG+D+KDRRKRLDRESDMAALLEATRPALKDVLGKV+SMSRDQVGCRLLQQKLDECPDRPP+GDAGKE   A E+DAVSAIF EALP+L  MMIDPFGNYLFQKLFVK+DDHQRLLAV+AV +RMPEAAVNLHGTRCVQKVVELCRTD QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVA+HRHGCCVLQRCLDAAGP LR+KL++EVARNGL+LMQDPFGNYVVQYVLKTC+REETY LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVA+NEEGLKLV AIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct:  314 GMPMYAVHSDG-GVXXXXXXAVNGGDAYGQGVVSHAPPPHAHAHNL-QGGGLDNGPMSGVGD-QQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGDGGGSXXXXXXXXXXXXXXXXXXXX-----------XMQPMVLY-QQQGGNGGAPQGQHXXXXXXHGQPGADQAA----------AASPMFLPMSQAGYGYVP-QMAHLQAAGGVPVYQMAGAGIDGGQANARANGGASGXXXXXXXXXXXXXXXXXXGRVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGVGGGVEKGRLSPPLGAPMQQHP-RFSGSPTHP---PPHVH--HPGGLQQPQQQQPMHAPAWSVGGGVHDVGGAPHMGYLDAG---GGGYADGS--GYRGGGXXPGGPVQDFIRGARTA-REGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKE---ASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVADRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 1117          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 864 bits (2233), Expect = 2.660e-300
Identity = 487/660 (73.79%), Postives = 534/660 (80.91%), Query Frame = 0
Query:  557 ASASPMYLPITQAGYQYVPPHLSHLQSASGVPIYQMA-PGLDGSQAAGRPNGVVAASPAGAPASTGSAS----------GRGSTGTPQLASPSSGAPPAQSFQVHYALTPQGIVPMVPIMPNGAGGFTNPALYPGIGGVFDDGRGS-IGTIAGITGGVD-----GVDKGRMSPPLAGGGAAIPARFAGSPH---PHATSQHLHAGIPGAIQPMHAPAWSVAG-VHEAGP-----YHDGGRFNDRGYPGGAPEGFRGGPGG---------RDARMAPRDAEAGKDVKDRRKRLDRESDMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 1181
            A+ASPM+LP++QAGY YVP  ++HLQ+  GVP+YQMA  G+DG QA  R NGV         AS G             GR S  +P +ASP +GAP  QSFQVHYA+TPQGIVPMVP++PNGAGGFTNPALYPG+G ++DDGR + +G + G++  +D     GV+KGR+SPPLA      P RF+GSP    PH               PMHAPAWSV G VH+ G      Y D G     GY  G+  G+RGG            R AR A R+ EAG+D+KDRRKRLDRESDMAALLEATRPALKDVLGKV+SMSRDQVGCRLLQQKLDECPDRPP+GDAGKE +   E+DAVSAIF EALP+L  MMIDPFGNYLFQKLFVK+DDHQRLLAV+AVT+RMPEAAVNLHGTRCVQKVVELCRTD QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVA+HRHGCCVLQRCLDAAGP LR+KL++EVARNGL+LMQDPFGNYVVQYVLKTC+REETY LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLV AIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct:   90 AAASPMFLPMSQAGYGYVP-QMAHLQAGGGVPVYQMAGAGIDGGQANARANGV---------ASGGGXXXXXXXXXXXXGRVSPLSPSVASPQAGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGAGGGVEKGRLSPPLAAPMQQHP-RFSGSPTHPPPHVHXXXXXXXXXXXXXPMHAPAWSVGGGVHDVGGAPHMGYLDAG---GGGYADGS--GYRGGGXXXXXXXQDFIRGARTA-REGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPS---EDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 729          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.050e-99
Identity = 176/339 (51.92%), Postives = 230/339 (67.85%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQ-AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYP 1166
            A++D+ G+V++MS+DQ GCRLLQ++LD C  RP               D    I+ EALP L  MM+DPFGNYLFQKL  ++ D QRL  VK V+  +  AA+NLHGTR VQKVVE+C TD   A +I ++L    V+L +D NGNHV+QRALQ +PA  N FV +A+      V  HRHGCCVLQRC+DAA    +  ++ +V  + +KLMQDP+GNYVVQYVL  C  +ET  L +   GHV  LS QKFSSNV+E CLE A  E++  FV E+    R+  ++ DQ+ANYVVQRAL+VA++E  L LV AI+PHL +M++TS GRRI A+I+KR+P
Sbjct:  254 AVEDLQGRVYAMSKDQNGCRLLQEQLD-CVGRP---------------DLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFP 576          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A6G0WN87_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN87_9STRA)

HSP 1 Score: 332 bits (850), Expect = 2.000e-96
Identity = 172/346 (49.71%), Postives = 231/346 (66.76%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVI---ARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 1171
            ++ D+ G+VF+MS+DQ GCRLLQ++L E  DR                D    I+ E+LP L  MM+DPFGNYLFQKL  ++ D QRL+ V+ V+  +  AA+NLHGTR VQKVVE+C +     +I     +L    V+L +D NGNHV+QRALQ MP+  N FV +A+ A    V  HRHGCCVLQRC+DAA    + +++ +V ++ +KLMQDP+GNYVVQYVL  C   +   +    +GHV  LS QKFSSNV+E CLE A   ++  FV+E+    R+  ++ DQYANYVVQRAL+VA+ E  L+LVAAIRPHL SM++T  GRRI A+I+KR+P +D+G
Sbjct:  304 SIDDIQGRVFAMSKDQNGCRLLQEQL-EFDDRA---------------DLCDVIYAESLPHLVDMMVDPFGNYLFQKLLERVSDTQRLVIVQHVSFHLVAAALNLHGTRSVQKVVEICASSSHPLLIELIVDALKEDAVRLCIDSNGNHVIQRALQFMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANASQKKEVIAQVEKHAMKLMQDPYGNYVVQYVLDACLPADALGVMEKCVGHVFELSIQKFSSNVIEKCLELAPDYLRQTFVKEIIASPRMYRMLQDQYANYVVQRALSVASEENCLQLVAAIRPHLASMKNTQGGRRIQARILKRFPHLDVG 633          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 325 bits (834), Expect = 9.620e-96
Identity = 169/378 (44.71%), Postives = 233/378 (61.64%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC--------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 1174
            ++ D+  +VF+MS+DQ GCRLLQ++LD         D G         D    I++E+L  L +MM+DPFGNYLFQKL  ++ + QRL+ ++ V+  +  AA+NLHGTR VQKVVE+C                                RT     +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + +++ +V R  +KLMQDP+GNYVVQYVL +CT EE + +   PLGH+  LS QKFSSNV+E CLE+A   V+ K++ E+    ++ +++ DQ+ANYVVQRAL V   E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+  ++
Sbjct:   79 SVDDIQNRVFAMSKDQNGCRLLQEQLDY-------EDRG---------DLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.280e-95
Identity = 173/357 (48.46%), Postives = 231/357 (64.71%), Query Frame = 0
Query:  818 DMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAV---IARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 1171
            D A+ L      + D+ G+V++MS+DQ GCRLLQ++LD                     D    I+ E+LP L  MM+DPFGNYLFQKL  ++ D QRL+ V+ V   +  AA+NLHGTR VQKVVE+C +  Q A+   I  +L    V+L +D NGNHV+QRALQ+MP+  N FV +A+ A    V  HRHGCCVLQRC+DAA    + +++ +V  + +KLMQDP+GNYVVQYVL  C+  +   +    + HV  LS QKFSSNV+E CLE A   ++  FV E+    R+  ++ DQYANYVVQRAL+VA+ E  L LVAAIRPHL SM++T  GRRI A+I+KR+P +D+G
Sbjct:  325 DSASSLFGATLTIDDIQGRVYAMSKDQNGCRLLQEQLD----------------FVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQDQYANYVVQRALSVASEENCLALVAAIRPHLASMKNTQGGRRIQARILKRFPHLDVG 665          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA)

HSP 1 Score: 327 bits (839), Expect = 8.080e-94
Identity = 171/383 (44.65%), Postives = 240/383 (62.66%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRT---------DDQAA--------------------------VIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILM 1176
            +++D+  +VF+MS+DQ GCRLLQ++LD   DR                D    I++E+L  L +MM+DPFGNYLFQKL  ++++ QRL+ ++ V+  +  AA+NLHGTR VQKVVE+C T         +D+ A                          +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + +++++V R  +KLMQDP+GNYVVQYVL +CT EE + +   PLGH+  LS QKFSSNV+E CLE+A   V+ K++ E+    ++ +++ DQ+ANYVVQRAL V   E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+  ++ M
Sbjct:  304 SVEDIQNRVFAMSKDQNGCRLLQEQLD-YEDRA---------------DLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISVDMGM 670          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A0N7L824_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L824_PLAHL)

HSP 1 Score: 330 bits (845), Expect = 5.960e-93
Identity = 170/373 (45.58%), Postives = 235/373 (63.00%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 1171
            +++D+  +VF+MS+DQ GCRLLQ++LD   DR                D    I+ E+L  L +MM+DPFGNYLFQKL  ++ + QRL+ ++ V+  +  AA+NLHGTR VQKVVE+C                              RT     +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA  + + +++++V R  +KLMQDP+GNYVVQYVL +CT EE Y +   PLGH+  LS QKFSSNV+E CLE+A   V+ +++ E+    ++ +++ DQ+ANYVVQRAL V   ++ L LV AIRPHL +M++TS GRRI A+I+KR+PT+D+G
Sbjct:  521 SVEDIQNRVFTMSKDQNGCRLLQEQLD-YEDRT---------------DLCEVIYHESLDHLAEMMVDPFGNYLFQKLLERVKETQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCALSPNVIENDYHEEDCEEMRFASQGESETRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCQECTTVGTHRHGCCVLQRCLDAANKRQKTEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVILKPLGHIFELSIQKFSSNVIEKCLEKAPERVRQQYIAEITTCLKLNKMLQDQFANYVVQRALCVCAEDQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPTMDMG 877          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: G4ZK69_PHYSP (PUM-HD domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZK69_PHYSP)

HSP 1 Score: 328 bits (842), Expect = 6.860e-93
Identity = 170/383 (44.39%), Postives = 237/383 (61.88%), Query Frame = 0
Query:  829 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC-----------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILM 1176
            +++D+  +VF+MS+DQ GCRLLQ++LD   DR                D    I++E+L  L +MM+DPFGNYLFQKL  ++++ QRL+ ++ V+  +  AA+NLHGTR VQKVVE+C                                   RT     +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + +++++V R  +KLMQDP+GNYVVQYVL +CT EE + +   PLGH+  LS QKFSSNV+E CLE+A   V+ K++ E+    ++ +++ DQ+ANYVVQRAL V   E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+  ++ M
Sbjct:  448 SVEDIQNRVFAMSKDQNGCRLLQEQLD-YEDRA---------------DLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDDGDEYGYVNDREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDMGM 814          
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA)

HSP 1 Score: 328 bits (841), Expect = 8.560e-93
Identity = 169/351 (48.15%), Postives = 229/351 (65.24%), Query Frame = 0
Query:  831 KDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTD-----------DQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDL 1170
            +D+ G+V+SMS+DQ GCRLLQ++L E  DR                     IF+E+L  LP+MM+DPFGNYLFQKL  + D+ QRL  V+AV   +  AA+NLHGTR VQKVVE+C              D + ++  +L    V+L +D NGNHV+QRALQ+  +    F+ +A++     V  HRHGCCVLQRCLDAA    + +L+ +V  + +KLMQDP+GNYVVQYVL  CT EE   +   PLGHV  LS QKFSSNV+E CLE+A   ++ ++VEEL    +++ L+ DQ+ANYVVQRAL V    + + LV AI PHL++M+++S+GRRI A+I KR+P +DL
Sbjct:  538 EDIKGRVYSMSKDQNGCRLLQEQL-EYDDRKV---------------LWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQDQFANYVVQRALCVCAESQCMALVTAICPHLNAMKNSSNGRRITARIAKRFPQMDL 872          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG61_9PHAE4.400e-31166.98PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FSX6_ECTSI2.660e-30073.79PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YPP5_9STRA1.050e-9951.92Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0WN87_9STRA2.000e-9649.71Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A833SFT8_PHYIN9.620e-9644.71Pumilio-family RNA binding repeat domain-containin... [more]
A0A485KML4_9STRA1.280e-9548.46Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A662WKH4_9STRA8.080e-9444.65Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A0N7L824_PLAHL5.960e-9345.58Rna-binding protein n=1 Tax=Plasmopara halstedii T... [more]
G4ZK69_PHYSP6.860e-9344.39PUM-HD domain-containing protein n=1 Tax=Phytophth... [more]
A0A024GRC2_9STRA8.560e-9348.15Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 921..956
e-value: 30.0
score: 9.1
coord: 885..920
e-value: 0.0078
score: 25.4
coord: 1030..1065
e-value: 0.0082
score: 25.3
coord: 958..993
e-value: 6.2E-5
score: 32.4
coord: 1104..1139
e-value: 0.023
score: 23.8
coord: 994..1029
e-value: 3.8E-4
score: 29.8
coord: 832..867
e-value: 27.0
score: 9.5
coord: 1066..1101
e-value: 0.012
score: 24.8
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 959..984
e-value: 1.6E-5
score: 24.3
coord: 1037..1059
e-value: 6.0E-6
score: 25.7
coord: 1107..1131
e-value: 1.3E-4
score: 21.5
coord: 1069..1098
e-value: 9.7E-4
score: 18.7
coord: 995..1022
e-value: 6.1E-5
score: 22.5
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 958..993
score: 9.807
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1066..1101
score: 6.891
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 885..924
score: 7.614
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1030..1065
score: 9.341
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 832..855
score: 5.981
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 928..956
score: 4.978
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1140..1176
score: 4.604
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1102..1139
score: 10.017
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 994..1029
score: 9.574
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 819..1167
e-value: 1.4E-106
score: 358.3
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 498..1158
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 498..1158
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 808..1165
score: 83.998
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 827..1160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1743contigH-paniculata_contig1743:2851..16880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1743.4122.1mRNA_H-paniculata_contig1743.4122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1743 1919..17417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1743.4122.1 ID=prot_H-paniculata_contig1743.4122.1|Name=mRNA_H-paniculata_contig1743.4122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1182bp
MEPAGAAGAGDEEPFGFPTQRRTGATKSHRRAASSPAIDHDFGRSASSMY
SGPFSVLGESTSNGLFSPRLAIGLSKGHRETASGDFTMSTEAGDTSFTSS
LDSLFHRGGLESLRSDFLKMDLGRRRISEDDRERLSHLSGGDSTDGVRVS
TGGNGGGGVTSSRPNSLPRSFSATASGFSAATSGGSSSNLPVSSPDGIHH
SSDRSVVPSSDATLRMLAASGGQSTSVRRSPSGGGSSDNGAGTSSVGVSA
VLGGSRAGSAGGAGNGPSGDAGRGPTSAHQGHHSLSNGGVSRSNGGAGGR
GSSGDRDRRASTSSSGVGYRSGQGAGAGRPGGGVQTWMNGSVDDVYGFSH
QDSGIPAGGAGGGGGLSSRSPPPPPGGVPVYVHGSDSYNIPIQHTYALNG
ESYGQSVVGHVPAHGLGQMQGPQSAGLEGLGSGDDQLLSAHMSGMSSPSH
PSVPAPQHVYMPAPGTYMVPGGNGAGSNGSASGGGAGGGGSSGGSGGGGG
HVQHGAGGLQQPMVLFGHQPQANGPPPSAQQHQPPQQQQLQSSHPAAGSG
AESGAHASASPMYLPITQAGYQYVPPHLSHLQSASGVPIYQMAPGLDGSQ
AAGRPNGVVAASPAGAPASTGSASGRGSTGTPQLASPSSGAPPAQSFQVH
YALTPQGIVPMVPIMPNGAGGFTNPALYPGIGGVFDDGRGSIGTIAGITG
GVDGVDKGRMSPPLAGGGAAIPARFAGSPHPHATSQHLHAGIPGAIQPMH
APAWSVAGVHEAGPYHDGGRFNDRGYPGGAPEGFRGGPGGRDARMAPRDA
EAGKDVKDRRKRLDRESDMAALLEATRPALKDVLGKVFSMSRDQVGCRLL
QQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGN
YLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDD
QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLV
QVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQY
VLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFV
EELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQS
TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold