mRNA_H-paniculata_contig1743.4122.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE) HSP 1 Score: 906 bits (2342), Expect = 7.750e-306 Identity = 566/845 (66.98%), Postives = 632/845 (74.79%), Query Frame = 1
Query: 1327 GVPVYVHGSDSYNIPIQHTYALNG-ESYGQSVVGHVP-----AHGLGQMQGPQSAGLEGLGSGDDQLLSAHMSGMSSPSHPSVPAPQHVYMPAPGTYMVPGGNGAGSNGSAXXXXXXXXXXXXXXXXXXXHVQHGAGGLQQPMVLFGHQPQANGPXXXXXXXXXXXXXXLQSSHPAAGSGAESGAHASASPMYLPITQAGYQYVPPHLSHLQSASGVPIYQMA-PGLDGSQAAGRPNGVVAASPAGAPASTGSAS-----GRGSTGTPQLASPSSGAPPAQSFQVHYALTPQGIVPMVPIMPNGAGGFTNPALYPGIGGVFDDGRGS-IGTIAGITGGVD-----GVDKGRMSPPLAGGGAAIPARFAGSP-HPHATSQHLHAGIPGAIQ------PMHAPAWSVAG-VHEAGP-----YHDGGRFNDRGYPGGAPEGFRGG---PGG------RDARMAPRDAEAGKDVKDRRKRLDRESDMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 3741
G+P+Y SD + A+NG ++YGQ VV H P AH L Q G + + G+G QLL+ HM+ M SP P + APQ YMP+ GTY+V G+G GS XXXXXXXXXXXXXXXX QPMVL+ Q NG XXXXXX + AA +ASPM+LP++QAGY YVP ++HLQ+A GVP+YQMA G+DG QA R NG + GR S +P +ASP GAP QSFQVHYA+TPQGIVPMVP++PNGAGGFTNPALYPG+G ++DDGR + +G + G++ +D GV+KGR+SPPL P RF+GSP HP H+H PG +Q PMHAPAWSV G VH+ G Y D G GY G+ G+RGG PGG R AR A R+ EAG+D+KDRRKRLDRESDMAALLEATRPALKDVLGKV+SMSRDQVGCRLLQQKLDECPDRPP+GDAGKE A E+DAVSAIF EALP+L MMIDPFGNYLFQKLFVK+DDHQRLLAV+AV +RMPEAAVNLHGTRCVQKVVELCRTD QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVA+HRHGCCVLQRCLDAAGP LR+KL++EVARNGL+LMQDPFGNYVVQYVLKTC+REETY LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVA+NEEGLKLV AIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct: 314 GMPMYAVHSDG-GVXXXXXXAVNGGDAYGQGVVSHAPPPHAHAHNL-QGGGLDNGPMSGVGD-QQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGDGGGSXXXXXXXXXXXXXXXXXXXX-----------XMQPMVLY-QQQGGNGGAPQGQHXXXXXXHGQPGADQAA----------AASPMFLPMSQAGYGYVP-QMAHLQAAGGVPVYQMAGAGIDGGQANARANGGASGXXXXXXXXXXXXXXXXXXGRVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGVGGGVEKGRLSPPLGAPMQQHP-RFSGSPTHP---PPHVH--HPGGLQQPQQQQPMHAPAWSVGGGVHDVGGAPHMGYLDAG---GGGYADGS--GYRGGGXXPGGPVQDFIRGARTA-REGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKE---ASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVADRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 1117
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI) HSP 1 Score: 864 bits (2232), Expect = 3.660e-295 Identity = 487/660 (73.79%), Postives = 534/660 (80.91%), Query Frame = 1
Query: 1867 ASASPMYLPITQAGYQYVPPHLSHLQSASGVPIYQMA-PGLDGSQAAGRPNGVVAASPAGAPASTGSAS----------GRGSTGTPQLASPSSGAPPAQSFQVHYALTPQGIVPMVPIMPNGAGGFTNPALYPGIGGVFDDGRGS-IGTIAGITGGVD-----GVDKGRMSPPLAGGGAAIPARFAGSPH---PHATSQHLHAGIPGAIQPMHAPAWSVAG-VHEAGP-----YHDGGRFNDRGYPGGAPEGFRGGPGG---------RDARMAPRDAEAGKDVKDRRKRLDRESDMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 3741
A+ASPM+LP++QAGY YVP ++HLQ+ GVP+YQMA G+DG QA R NGV AS G GR S +P +ASP +GAP QSFQVHYA+TPQGIVPMVP++PNGAGGFTNPALYPG+G ++DDGR + +G + G++ +D GV+KGR+SPPLA P RF+GSP PH PMHAPAWSV G VH+ G Y D G GY G+ G+RGG R AR A R+ EAG+D+KDRRKRLDRESDMAALLEATRPALKDVLGKV+SMSRDQVGCRLLQQKLDECPDRPP+GDAGKE + E+DAVSAIF EALP+L MMIDPFGNYLFQKLFVK+DDHQRLLAV+AVT+RMPEAAVNLHGTRCVQKVVELCRTD QAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVA+HRHGCCVLQRCLDAAGP LR+KL++EVARNGL+LMQDPFGNYVVQYVLKTC+REETY LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLV AIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct: 90 AAASPMFLPMSQAGYGYVP-QMAHLQAGGGVPVYQMAGAGIDGGQANARANGV---------ASGGGXXXXXXXXXXXXGRVSPLSPSVASPQAGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGAGGGVEKGRLSPPLAAPMQQHP-RFSGSPTHPPPHVHXXXXXXXXXXXXXPMHAPAWSVGGGVHDVGGAPHMGYLDAG---GGGYADGS--GYRGGGXXXXXXXQDFIRGARTA-REGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPS---EDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 729
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA) HSP 1 Score: 338 bits (867), Expect = 5.460e-98 Identity = 176/339 (51.92%), Postives = 230/339 (67.85%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQ-AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYP 3696
A++D+ G+V++MS+DQ GCRLLQ++LD C RP D I+ EALP L MM+DPFGNYLFQKL ++ D QRL VK V+ + AA+NLHGTR VQKVVE+C TD A +I ++L V+L +D NGNHV+QRALQ +PA N FV +A+ V HRHGCCVLQRC+DAA + ++ +V + +KLMQDP+GNYVVQYVL C +ET L + GHV LS QKFSSNV+E CLE A E++ FV E+ R+ ++ DQ+ANYVVQRAL+VA++E L LV AI+PHL +M++TS GRRI A+I+KR+P
Sbjct: 254 AVEDLQGRVYAMSKDQNGCRLLQEQLD-CVGRP---------------DLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFP 576
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A6G0WN87_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN87_9STRA) HSP 1 Score: 332 bits (850), Expect = 6.070e-95 Identity = 172/346 (49.71%), Postives = 231/346 (66.76%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAVI---ARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 3711
++ D+ G+VF+MS+DQ GCRLLQ++L E DR D I+ E+LP L MM+DPFGNYLFQKL ++ D QRL+ V+ V+ + AA+NLHGTR VQKVVE+C + +I +L V+L +D NGNHV+QRALQ MP+ N FV +A+ A V HRHGCCVLQRC+DAA + +++ +V ++ +KLMQDP+GNYVVQYVL C + + +GHV LS QKFSSNV+E CLE A ++ FV+E+ R+ ++ DQYANYVVQRAL+VA+ E L+LVAAIRPHL SM++T GRRI A+I+KR+P +D+G
Sbjct: 304 SIDDIQGRVFAMSKDQNGCRLLQEQL-EFDDRA---------------DLCDVIYAESLPHLVDMMVDPFGNYLFQKLLERVSDTQRLVIVQHVSFHLVAAALNLHGTRSVQKVVEICASSSHPLLIELIVDALKEDAVRLCIDSNGNHVIQRALQFMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANASQKKEVIAQVEKHAMKLMQDPYGNYVVQYVLDACLPADALGVMEKCVGHVFELSIQKFSSNVIEKCLELAPDYLRQTFVKEIIASPRMYRMLQDQYANYVVQRALSVASEENCLQLVAAIRPHLASMKNTQGGRRIQARILKRFPHLDVG 633
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN) HSP 1 Score: 325 bits (834), Expect = 2.370e-94 Identity = 169/378 (44.71%), Postives = 233/378 (61.64%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC--------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 3720
++ D+ +VF+MS+DQ GCRLLQ++LD D G D I++E+L L +MM+DPFGNYLFQKL ++ + QRL+ ++ V+ + AA+NLHGTR VQKVVE+C RT +I +L V+L +D NGNHV+QRALQ M N FV +A+ V HRHGCCVLQRCLDAA + +++ +V R +KLMQDP+GNYVVQYVL +CT EE + + PLGH+ LS QKFSSNV+E CLE+A V+ K++ E+ ++ +++ DQ+ANYVVQRAL V E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+ ++
Sbjct: 79 SVDDIQNRVFAMSKDQNGCRLLQEQLDY-------EDRG---------DLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA) HSP 1 Score: 330 bits (847), Expect = 3.770e-94 Identity = 173/357 (48.46%), Postives = 231/357 (64.71%), Query Frame = 1
Query: 2650 DMAALLEATRPALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTDDQAAV---IARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 3711
D A+ L + D+ G+V++MS+DQ GCRLLQ++LD D I+ E+LP L MM+DPFGNYLFQKL ++ D QRL+ V+ V + AA+NLHGTR VQKVVE+C + Q A+ I +L V+L +D NGNHV+QRALQ+MP+ N FV +A+ A V HRHGCCVLQRC+DAA + +++ +V + +KLMQDP+GNYVVQYVL C+ + + + HV LS QKFSSNV+E CLE A ++ FV E+ R+ ++ DQYANYVVQRAL+VA+ E L LVAAIRPHL SM++T GRRI A+I+KR+P +D+G
Sbjct: 325 DSASSLFGATLTIDDIQGRVYAMSKDQNGCRLLQEQLD----------------FVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQDQYANYVVQRALSVASEENCLALVAAIRPHLASMKNTQGGRRIQARILKRFPHLDVG 665
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA) HSP 1 Score: 327 bits (839), Expect = 2.150e-92 Identity = 171/383 (44.65%), Postives = 240/383 (62.66%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRT---------DDQAA--------------------------VIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILM 3726
+++D+ +VF+MS+DQ GCRLLQ++LD DR D I++E+L L +MM+DPFGNYLFQKL ++++ QRL+ ++ V+ + AA+NLHGTR VQKVVE+C T +D+ A +I +L V+L +D NGNHV+QRALQ M N FV +A+ V HRHGCCVLQRCLDAA + +++++V R +KLMQDP+GNYVVQYVL +CT EE + + PLGH+ LS QKFSSNV+E CLE+A V+ K++ E+ ++ +++ DQ+ANYVVQRAL V E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+ ++ M
Sbjct: 304 SVEDIQNRVFAMSKDQNGCRLLQEQLD-YEDRA---------------DLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISVDMGM 670
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A0N7L824_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L824_PLAHL) HSP 1 Score: 330 bits (845), Expect = 1.740e-91 Identity = 170/373 (45.58%), Postives = 235/373 (63.00%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLG 3711
+++D+ +VF+MS+DQ GCRLLQ++LD DR D I+ E+L L +MM+DPFGNYLFQKL ++ + QRL+ ++ V+ + AA+NLHGTR VQKVVE+C RT +I +L V+L +D NGNHV+QRALQ M N FV +A+ V HRHGCCVLQRCLDAA + + +++++V R +KLMQDP+GNYVVQYVL +CT EE Y + PLGH+ LS QKFSSNV+E CLE+A V+ +++ E+ ++ +++ DQ+ANYVVQRAL V ++ L LV AIRPHL +M++TS GRRI A+I+KR+PT+D+G
Sbjct: 521 SVEDIQNRVFTMSKDQNGCRLLQEQLD-YEDRT---------------DLCEVIYHESLDHLAEMMVDPFGNYLFQKLLERVKETQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCALSPNVIENDYHEEDCEEMRFASQGESETRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCQECTTVGTHRHGCCVLQRCLDAANKRQKTEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVILKPLGHIFELSIQKFSSNVIEKCLEKAPERVRQQYIAEITTCLKLNKMLQDQFANYVVQRALCVCAEDQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPTMDMG 877
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: G4ZK69_PHYSP (PUM-HD domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZK69_PHYSP) HSP 1 Score: 328 bits (842), Expect = 1.920e-91 Identity = 170/383 (44.39%), Postives = 237/383 (61.88%), Query Frame = 1
Query: 2683 ALKDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELC-----------------------------------RTDDQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEILM 3726
+++D+ +VF+MS+DQ GCRLLQ++LD DR D I++E+L L +MM+DPFGNYLFQKL ++++ QRL+ ++ V+ + AA+NLHGTR VQKVVE+C RT +I +L V+L +D NGNHV+QRALQ M N FV +A+ V HRHGCCVLQRCLDAA + +++++V R +KLMQDP+GNYVVQYVL +CT EE + + PLGH+ LS QKFSSNV+E CLE+A V+ K++ E+ ++ +++ DQ+ANYVVQRAL V E+ L LV AIRPHL +M++TS GRRI A+I+KR+P +D+ ++ M
Sbjct: 448 SVEDIQNRVFAMSKDQNGCRLLQEQLD-YEDRA---------------DLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDDGDEYGYVNDREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDMGM 814
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA) HSP 1 Score: 328 bits (841), Expect = 2.370e-91 Identity = 169/351 (48.15%), Postives = 229/351 (65.24%), Query Frame = 1
Query: 2689 KDVLGKVFSMSRDQVGCRLLQQKLDECPDRPPDGDAGKEGASAGEEDAVSAIFEEALPDLPQMMIDPFGNYLFQKLFVKIDDHQRLLAVKAVTERMPEAAVNLHGTRCVQKVVELCRTD-----------DQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAVHRHGCCVLQRCLDAAGPKLRVKLVDEVARNGLKLMQDPFGNYVVQYVLKTCTREETYALCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVAAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDL 3708
+D+ G+V+SMS+DQ GCRLLQ++L E DR IF+E+L LP+MM+DPFGNYLFQKL + D+ QRL V+AV + AA+NLHGTR VQKVVE+C D + ++ +L V+L +D NGNHV+QRALQ+ + F+ +A++ V HRHGCCVLQRCLDAA + +L+ +V + +KLMQDP+GNYVVQYVL CT EE + PLGHV LS QKFSSNV+E CLE+A ++ ++VEEL +++ L+ DQ+ANYVVQRAL V + + LV AI PHL++M+++S+GRRI A+I KR+P +DL
Sbjct: 538 EDIKGRVYSMSKDQNGCRLLQEQL-EYDDRKV---------------LWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQDQFANYVVQRALCVCAESQCMALVTAICPHLNAMKNSSNGRRITARIAKRFPQMDL 872 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1743.4122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1743.4122.1 >prot_H-paniculata_contig1743.4122.1 ID=prot_H-paniculata_contig1743.4122.1|Name=mRNA_H-paniculata_contig1743.4122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1182bp MEPAGAAGAGDEEPFGFPTQRRTGATKSHRRAASSPAIDHDFGRSASSMYback to top mRNA from alignment at H-paniculata_contig1743:1919..17417- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1743.4122.1 ID=mRNA_H-paniculata_contig1743.4122.1|Name=mRNA_H-paniculata_contig1743.4122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15499bp|location=Sequence derived from alignment at H-paniculata_contig1743:1919..17417- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1743:1919..17417- >mRNA_H-paniculata_contig1743.4122.1 ID=mRNA_H-paniculata_contig1743.4122.1|Name=mRNA_H-paniculata_contig1743.4122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7092bp|location=Sequence derived from alignment at H-paniculata_contig1743:1919..17417- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |