mRNA_H-paniculata_contig17427.4121.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A6H5JGP3_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 7.670e-43 Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGKPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQV 249
NDIRNRRLK+FP VL+GPWVVRKAVGKP ++G++L RYFRRPGYFEVDIDVGSS LAS ATHLAGGYAK++VLDLAFALQV
Sbjct: 24 NDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQV 105
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.280e-37 Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGKPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
NDIRNRRLK+FP VL+GPWVVRKAVGKP ++G++L RYFRRPGYFEVDIDVGSS LAS ATHLAGGYAK++VLDLAFALQ
Sbjct: 1752 NDIRNRRLKLFPKVLEGPWVVRKAVGKPCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQ 1832
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A6H5JHL0_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL0_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.700e-23 Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVG-KPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQVMK 255
+D+RN R K+FP +L+GPW+VRKAVG KP ++ ++L RYFR YFEVDID+GSS +A LA GYAK + +D+ F +QV +
Sbjct: 125 DDLRNMRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKSLCVDMGFCIQVSR 209
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A7S0GW50_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GW50_MICPS) HSP 1 Score: 85.5 bits (210), Expect = 1.610e-17 Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 7 DIRNRRLKMFPNVLQGPWVVRKAVG-KPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
+ R+ RLK+ P+V GPWVV++AVG KP IVG+ L+VRY RP + EVDID+GSSA+A+ GY + +V+D+ F ++
Sbjct: 450 EYRDARLKLIPHVALGPWVVQRAVGTKPLIVGKALKVRYHSRPNFLEVDIDIGSSAVANNVVRFVLGYVRTLVVDMCFLVE 530
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: D8T7H8_SELML (EDR2_C domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T7H8_SELML) HSP 1 Score: 84.0 bits (206), Expect = 3.060e-17 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGK--PFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
++ RN R K+ +++GPW+VR AVG ++GR L RY+R P Y E+D+D+GSS +ASY HLA GY V +D+AF ++
Sbjct: 173 DEFRNGRFKLINRIVKGPWIVRAAVGNHAACLLGRALTCRYWRGPNYLEIDVDIGSSTVASYILHLALGYVNSVSVDMAFLVE 255
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A7S2FI89_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FI89_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.240e-17 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 43 VLQGPWVVRKAVG-KPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
+++GPW+VR AV KP ++GR+L+ RYFR GY E DI +GSSA+A+ T L GYAK +V+DLAF L+
Sbjct: 2 IIEGPWIVRSAVPVKPALMGRKLKQRYFRGEGYVETDIHIGSSAIANNITGLCRGYAKAMVVDLAFCLE 70
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A2C9V1Y5_MANES (EDR2_C domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9V1Y5_MANES) HSP 1 Score: 83.2 bits (204), Expect = 4.110e-17 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGKPF--IVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
+ RN RLK+ N+++GPW+VRKAVG+ I+GR L RY +FEVD+D+GSS +AS HLA GY + +DLAF ++
Sbjct: 143 DGFRNSRLKLIANIVKGPWIVRKAVGEQAVCIIGRALTCRYCVAENFFEVDVDIGSSVVASAIVHLAFGYITMLTVDLAFVIE 225
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A5K1BKJ8_9MAGN (EDR2_C domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1BKJ8_9MAGN) HSP 1 Score: 83.6 bits (205), Expect = 4.460e-17 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGK--PFIVGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
++ RN R K+ +++GPW+VR AVG ++GR LQ+RY R P Y E+D+D+GSSALA+ HLA GY V +D+ F ++
Sbjct: 202 DEFRNARFKIVNRIVRGPWIVRAAVGNYAACLLGRALQIRYVRGPNYLEIDVDIGSSALANAILHLALGYVTTVTIDMGFLVE 284
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A444Y8L5_ARAHY (EDR2_C domain-containing protein n=2 Tax=Arachis TaxID=3817 RepID=A0A444Y8L5_ARAHY) HSP 1 Score: 82.8 bits (203), Expect = 5.720e-17 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGKPFI--VGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
N RN RLK+ N+++GPW+VRKAVG+ I +GR L +Y + EVDID+GSS +AS HLA GY + +DLAF ++
Sbjct: 140 NGFRNSRLKLIANIVRGPWIVRKAVGEQAICIIGRALHCKYCSGENFMEVDIDIGSSMVASAIVHLAFGYISSLTVDLAFLIE 222
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Match: A0A6P8EIT7_PUNGR (protein ENHANCED DISEASE RESISTANCE 2-like isoform X1 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EIT7_PUNGR) HSP 1 Score: 82.8 bits (203), Expect = 6.700e-17 Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 4 NDIRNRRLKMFPNVLQGPWVVRKAVGKPFI--VGRRLQVRYFRRPGYFEVDIDVGSSALASYATHLAGGYAKHVVLDLAFALQ 246
+ RN RLK+ N+++GPW+V+KAVG+ I +GR L +YF+ + EVDID+GSS +AS HLA GY + +DLAF ++
Sbjct: 156 DGFRNSRLKLIANIVKGPWIVKKAVGEQAICIIGRALTCKYFKADKFLEVDIDIGSSMMASAIVHLAFGYITTLTVDLAFLIE 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17427.4121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17427.4121.1 >prot_H-paniculata_contig17427.4121.1 ID=prot_H-paniculata_contig17427.4121.1|Name=mRNA_H-paniculata_contig17427.4121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp MFPNVLQGPWVVRKAVGKPFIVGRRLQVRYFRRPGYFEVDIDVGSSALASback to top mRNA from alignment at H-paniculata_contig17427:4696..5324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17427.4121.1 ID=mRNA_H-paniculata_contig17427.4121.1|Name=mRNA_H-paniculata_contig17427.4121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=629bp|location=Sequence derived from alignment at H-paniculata_contig17427:4696..5324- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17427:4696..5324- >mRNA_H-paniculata_contig17427.4121.1 ID=mRNA_H-paniculata_contig17427.4121.1|Name=mRNA_H-paniculata_contig17427.4121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig17427:4696..5324- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |