prot_H-paniculata_contig17400.4107.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17400.4107.1
Unique Nameprot_H-paniculata_contig17400.4107.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.550e-41
Identity = 73/88 (82.95%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LDRLS+SAP HLKCPIC KIMSDAVI+PCC KSTCDSCVRRAL AS  MSCPLC++R V PDSLLPN SLRA VDEYLTRVTRESRG+
Sbjct:  149 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEYLTRVTRESRGK 236          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.010e-29
Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPN 67
            LDRLS+SAP HLKCPIC KIMSDAVI+PCC KSTCDSCVRRAL AS  MSCPLC+TR V PDSLLPN
Sbjct:  139 LDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPN 205          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 108 bits (271), Expect = 9.660e-26
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+LS +AP HLKCP+C  I+ DAV+VPCC  S CDSCVR AL A+  M CPLC    V PD L+PN SLRAA D+++ R+T+++R R
Sbjct:  331 LDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAAN-SMQCPLCSRPGVTPDQLIPNRSLRAAADDFVARMTKDARAR 417          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL)

HSP 1 Score: 93.2 bits (230), Expect = 3.380e-20
Identity = 42/88 (47.73%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+L  + P HL CP+C ++M+DAV++PCC +S CD C+R AL    +++CPLC T ++ P+ LLPN  LRA+V+E+L R   E + R
Sbjct:  334 LDQLISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IDHNLTCPLCNTPNMSPEKLLPNKVLRASVEEFLRRARTEQQER 420          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 1.540e-19
Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++M+DAV++PCC +S CD C+R AL     ++CPLC T ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  336 LDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IEKKLTCPLCNTTNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 422          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.960e-19
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC   ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  339 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 425          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT)

HSP 1 Score: 90.9 bits (224), Expect = 2.120e-19
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC   ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  332 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 418          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A3R7NI29_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NI29_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.140e-19
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC   ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  342 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 428          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A329T760_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T760_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.150e-19
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC   ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  340 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 426          
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Match: A0A421G8I3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G8I3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.150e-19
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMSCPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR 88
            LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC   ++ P+ LLPN  LR +VDE+L R   E + R
Sbjct:  342 LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNKVLRTSVDEFLRRARTEQQER 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17400.4107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L225_9PHAE3.550e-4182.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD5_ECTSI1.010e-2983.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNQ4_9STRA9.660e-2657.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C5H0_PYTOL3.380e-2047.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X144_GLOUD1.540e-1946.59Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2P4Y5F3_9STRA1.960e-1946.59Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0NE99_PHYIT2.120e-1946.59Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A3R7NI29_9STRA2.140e-1946.59Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A329T760_9STRA2.150e-1946.59Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A421G8I3_9STRA2.150e-1946.59Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 14..54
e-value: 0.0013
score: 28.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 14..55
score: 11.634
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 12..56
e-value: 4.4E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 7..86
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 4..81
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..87
e-value: 9.8E-20
score: 72.0
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 7..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17400contigH-paniculata_contig17400:4154..5354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17400.4107.1mRNA_H-paniculata_contig17400.4107.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17400 4154..5354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17400.4107.1 ID=prot_H-paniculata_contig17400.4107.1|Name=mRNA_H-paniculata_contig17400.4107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
LDRLSKSAPAHLKCPICFKIMSDAVIVPCCHKSTCDSCVRRALGASPDMS
CPLCKTRDVRPDSLLPNMSLRAAVDEYLTRVTRESRGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR033489RBBP6