prot_H-paniculata_contig10630.410.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig10630.410.1
Unique Name	prot_H-paniculata_contig10630.410.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	192

Homology

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BLAST of mRNA_H-paniculata_contig10630.410.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.710e-21
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = 0

Query:   22 EVFPSMDAINENSLFQLKMSKRFGRRARRFSSEGLSRKQPLAPPSGSNV----ID------SAATQIQTLVRMTEARKRTVRQEEVLNWSQPEVRKSRQKLSNMVYLWFGLYLGTVTWVTLCYVLTYDTVTIWSWVTATAWTISIDVVLRKPLTVLGNATLHTIQERVRKPEKTHI 187
            E+ P MDA+N+  + Q+ M+K +             R  P    S  +V    ID      +AA +IQTLVRM +AR+R VR++EV+ W  P VR  R++L+   Y    ++  +V W+ LCYV  YD   I +W+ AT   + +D+VLRKPL+VL  AT++TI++  R P   +I
Sbjct:  729 ELMPCMDAVNQRYMSQISMAKMY-------------RPPPKVDHSHQHVSSWTIDLCILRNTAAVKIQTLVRMYQARQRAVRRQEVVAWQSPHVRSMRKRLTFRAYTCLIVFTASVAWINLCYVALYDGPAIRNWIAATGIAVLVDIVLRKPLSVLVVATVNTIRDSARVPGTVYI 891

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig10630.410.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig10630.410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JLT2_9PHAE	2.710e-21	37.50	GPS domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..137
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 138..142
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 143..160
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 161..191
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.493
None	No IPR available	TMHMM	TMhelix		coord: 116..138
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 71..99 score: 6.577

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig10630	contig	H-paniculata_contig10630:1322..4415 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig10630.410.1	mRNA_H-paniculata_contig10630.410.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig10630 1062..4503 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig10630.410.1 ID=prot_H-paniculata_contig10630.410.1|Name=mRNA_H-paniculata_contig10630.410.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
MVSYVCVLVFSTIKIMICYVAEVFPSMDAINENSLFQLKMSKRFGRRARR
FSSEGLSRKQPLAPPSGSNVIDSAATQIQTLVRMTEARKRTVRQEEVLNW
SQPEVRKSRQKLSNMVYLWFGLYLGTVTWVTLCYVLTYDTVTIWSWVTAT
AWTISIDVVLRKPLTVLGNATLHTIQERVRKPEKTHIEESI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS