prot_H-paniculata_contig1739.4100.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1739.4100.1
Unique Nameprot_H-paniculata_contig1739.4100.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1063
Homology
BLAST of mRNA_H-paniculata_contig1739.4100.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 2.560e-98
Identity = 321/967 (33.20%), Postives = 432/967 (44.67%), Query Frame = 0
Query:   18 LAKVSQEISIAQTEVDALKNSLSLHSNDRA--SKAYAGL-DPQVVLQLFLSAAQQLDRLREKEIELLRLERCFADPGKWGLRASPAAAGPKLSSPPVPSHPTHVGLDTDSRDHGAHSCAAARKDDGRESSRRCSALAGAEGKVVLSLSDVSTWVSCRSFLDEMGVRNVRFVDAPVPRAELSIVVNDSHRFQWRDDQPVVSEASETKSIAPEIPTKEGPHRRSTSPYRPTCSRVRAGLAAYLNASIRPVAGSEWVIP-------------GRNANEHADFLSVLV----LRGNRLPGAAPQAPSESRAGAGTNARYFQGEAPTAALCLSAAVANGTPSGGLRVVLELVPPIPLGA--------------------SRPTVRAIRGGGAPGVDDQSV--LYRAIASLVAANARSPCSKPVVVLTDLQGVWKLMWLG--RGGGGSGSEASSSGHPMRDASPTSPNMRGGSGGXGGVAIGGTNSPNVDVFVWRLGAADAVSVLRSILAEESTTWDGEVS-AVARGDGVG-------------------LGS------IWANFRSGG----------------GPMASLRNRY-----NLHDHHSTAGVDSGGGDT-----------------------GVRTVSPSPISYMEHLRS--GTCFSAQILHGRGQQSGG------EMVRERQTSFASAPGRAA-----AAEGFGGGTSSSFLELLHSG----QAVSSIAGEH------REHRYSSNGHSSSNXXXXXXXXXXXXXANSYAAGPSGMVN--RNGFLVPPPVTNPL---------VYEPTVLQHLIPFVAGDGFLFVAGVCKGWREAWGMSRPQETSLDAAVQSPSRLGWARASGCTWSATVCARAAGGGYFATLRYXXXXXXXXXXXXXXXXAAETIMPVNTMIEWAARRTPSPGPA--PNSP--PMRLEILQWARLNGCPWDESTTSEAARVGN 832
            L  +S EI  A  EV  ++ +LS  +   A  S +Y GL D   +L+L L A +QL+ LREKE+ +L+              A+   +       P PS  T V                 +   G   +RR              LSDV+TW+SCRS LD MGV ++R V + VPRA+LS++V+  H FQW         A+  +S+A            + + YR    + +AGL AYLNA I P   +EWVIP             G + N  +DFLSV       RG R   A     + +  G GT  R  +G  P+AA+CLS A++ G P+ GLRV+LE+V P    A                     R + R      A G   Q    LYRAI +LVAAN RSP ++PVVVLTDLQ  WKL+WLG  R       EA+++      A+ T+                  +   VD+FVWR+   DA+SV+RS+L EE+  WDG+VS A  +GD                      LG        WAN  +                  GPM SLR+R+     N    HS      GG                          G+ + S  P++    LR    + F+   L G+   +GG      E+      +F++    A+     AAE  G  ++ + L  LH G     +    AG+       R     SNG+  S               N+   G     N  +  F    P T PL         + +PT+L+HLI F A +GFLFVAGV + WR+AWG+ RP ET +DAAVQSPSRLGWARASG  W  +VCARAA GG+ ATLRY                  + ++PV+TMI+WAA +  S   +   + P  P RLE+L+W R NGCPWDE+TTSEAAR GN
Sbjct:    2 LRLLSGEIDDAVREVKLIEEALSGSAGCDAGGSGSYLGLTDRGALLELLLCARRQLNLLREKEVAILK-----------SSAATEGRSDQHFDEEPSPSTATGV----------------CQPGGGVSDTRR--------------LSDVTTWMSCRSLLDSMGVGDIRLVHSAVPRAKLSVIVDALHLFQWPG-------AAAARSLA------------AGARYRAAGDQEQAGLHAYLNAVIPPGDANEWVIPVVGGQDPGAAAESGGHDNNSSDFLSVPCDGSWRRGRRSCQARDGRAAATEGGGGTQ-RAVRGGVPSAAICLSEAISCGAPASGLRVLLEVVLPQETSAIANGTAIASCKNGEDNGCRRGRGSCRGALSPRAAGAGRQQATGLYRAIGALVAANRRSPLTRPVVVLTDLQASWKLLWLGGARSDLAPAGEAAAAETAFHHAAATT-----------------VDGDEVDIFVWRMSPRDAISVVRSMLDEEAVGWDGQVSWAPRQGDAAXXXXXXXXXXXXXXXXXXXTLGDDGFHALAWANEGAAXXXXXXXXXXVAAGESKGPMESLRDRHLVGRRNFGRPHSCP--RHGGSRAXXXXXXXXXXXXXXXXXVEAYMGGIASTSSPPLAMEMALRREHASSFTGNSLPGQWTATGGSFGEGGELPPRECRAFSAGVQHASDGLNRAAEMMGRRSTFANLYPLHGGVGGGNSXXXXAGDEGYSVDDRFRGRLSNGNDHSTNGGATPREHRGGSFNNDGRGXXXXXNTRQRSFTASSPRTRPLSSPSAPVNPLADPTILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARASGLGWGPSVCARAASGGHLATLRYARALGCPWDWTCCALATTKALVPVSTMIQWAASQPASSSSSVVADDPLRPKRLEVLKWCRENGCPWDEATTSEAAREGN 888          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1739.4100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE2.560e-9833.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 806..956
coord: 850..1061
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 826..906
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 819..1061
e-value: 2.8E-13
score: 51.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 826..1056

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1739contigH-paniculata_contig1739:7900..17435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1739.4100.1mRNA_H-paniculata_contig1739.4100.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1739 5588..17498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1739.4100.1 ID=prot_H-paniculata_contig1739.4100.1|Name=mRNA_H-paniculata_contig1739.4100.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1063bp
MARGESTLANHALVSNRLAKVSQEISIAQTEVDALKNSLSLHSNDRASKA
YAGLDPQVVLQLFLSAAQQLDRLREKEIELLRLERCFADPGKWGLRASPA
AAGPKLSSPPVPSHPTHVGLDTDSRDHGAHSCAAARKDDGRESSRRCSAL
AGAEGKVVLSLSDVSTWVSCRSFLDEMGVRNVRFVDAPVPRAELSIVVND
SHRFQWRDDQPVVSEASETKSIAPEIPTKEGPHRRSTSPYRPTCSRVRAG
LAAYLNASIRPVAGSEWVIPGRNANEHADFLSVLVLRGNRLPGAAPQAPS
ESRAGAGTNARYFQGEAPTAALCLSAAVANGTPSGGLRVVLELVPPIPLG
ASRPTVRAIRGGGAPGVDDQSVLYRAIASLVAANARSPCSKPVVVLTDLQ
GVWKLMWLGRGGGGSGSEASSSGHPMRDASPTSPNMRGGSGGGGGVAIGG
TNSPNVDVFVWRLGAADAVSVLRSILAEESTTWDGEVSAVARGDGVGLGS
IWANFRSGGGPMASLRNRYNLHDHHSTAGVDSGGGDTGVRTVSPSPISYM
EHLRSGTCFSAQILHGRGQQSGGEMVRERQTSFASAPGRAAAAEGFGGGT
SSSFLELLHSGQAVSSIAGEHREHRYSSNGHSSSNDHYEHPYLANGHAAN
SYAAGPSGMVNRNGFLVPPPVTNPLVYEPTVLQHLIPFVAGDGFLFVAGV
CKGWREAWGMSRPQETSLDAAVQSPSRLGWARASGCTWSATVCARAAGGG
YFATLRYARAVRCPWDWRTCAQAAAETIMPVNTMIEWAARRTPSPGPAPN
SPPMRLEILQWARLNGCPWDESTTSEAARVGNLDVLRWARANGCPWNVLT
CAYAAAAGHLDILRWARKEGCPWNEATCAFAAAGGHLEVLKWCRANGCPW
GEETCASAARGARLEVLHWARSNGCPWGDGTCANAAEGGHLSVLQWARRE
GCAWTEATCTLSAKSGHLHVLQWARANGCAWGPATFRAAAARGDRHTLLF
LRVEGCPWDRRTCSSAARNGQLETLQWLRAEGCPWDSRTLDEAAKSGSTS
VFDWAMDNGCPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf