mRNA_H-paniculata_contig1737.4095.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A6H5KPN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPN3_9PHAE) HSP 1 Score: 453 bits (1165), Expect = 1.600e-144 Identity = 222/292 (76.03%), Postives = 253/292 (86.64%), Query Frame = 3
Query: 783 SGWTDVRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFPRPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKYVAPKHSKSQL 1658
S W + R +L+ C +A GG+PGA AGLLQVVTLMWLRT+VNYQCRYGTS+ AA ELYRQGG+LRFYRGV FAL+SNP+SRFGMAAANEGA+ALSDA P VS+TFTTWIASL AG+WR+VLTPLDTCKTVLQVEG KGFA LMKKVWGG +GCLYQGA AA+ ATAVGYFPWFL FN+LN RL+ P+A + LLR+AGIGLA+SV+SD+C+NSIRVLKTTKQAAAAYD +VTY GAAALVIE DG GL GRGLSTRILANGLQSMLFTVVWRYLH+K+V P+ ++L
Sbjct: 150 SAWPEARRVLKRCLARAASGGIPGAVAGLLQVVTLMWLRTIVNYQCRYGTSIVAAASELYRQGGVLRFYRGVVFALVSNPMSRFGMAAANEGAMALSDALPMQVSVTFTTWIASLFAGVWRVVLTPLDTCKTVLQVEGPKGFASLMKKVWGGQLGCLYQGATAAAAATAVGYFPWFLTFNFLNGRLRRPSALAGMLLRNAGIGLASSVSSDVCSNSIRVLKTTKQAAAAYDSKVTYSGAAALVIENDGLLGLFGRGLSTRILANGLQSMLFTVVWRYLHDKFVVPRREAAEL 441
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A4D9D315_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D315_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.240e-78 Identity = 147/274 (53.65%), Postives = 188/274 (68.61%), Query Frame = 3
Query: 807 ILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHE 1622
I R ++A GG+PGA AG++QVVTLMWLRTV NYQ RYGTS A LY+QGG+ RFY G+ FALI PLSRFG AAN+G AL F R + L T +A+L AG WRI L P+DT KTVLQVEG++G+ LM+++ G + YQG++A + A A+G+FPWF V+ LN ++ PA KL R+A IG AS+ +D TN +RV+KTTKQA A+ ++Y +++ ADGW GL GRGLSTRIL NGLQS++FTVVWR L E
Sbjct: 125 IFRIAGKRALGGGIPGALAGMMQVVTLMWLRTVGNYQYRYGTSFREAVATLYKQGGMGRFYEGLGFALIQGPLSRFGSTAANDGCRALLKNFETTRGLPLFVPTAMAALAAGSWRIFLMPIDTAKTVLQVEGNEGYRSLMRRIGRGELSAFYQGSLATAAAAALGHFPWFYVYTLLNEAIRAPAGWLGKLCRNAFIGFVASLVADTLTNVMRVVKTTKQATASLSS-ISYAQTVQIILAADGWNGLFGRGLSTRILTNGLQSIVFTVVWRALSE 397
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A448ZHR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHR9_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.440e-78 Identity = 144/276 (52.17%), Postives = 193/276 (69.93%), Query Frame = 3
Query: 807 ILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFPRPVSLT--FTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKY 1628
I RS ++A GGLPGAAAG++QV+ LMWLRT +NYQCRYG S A LYR GG+ RFYRG+ FAL+ PL+RF A+N+G LAL P+ T TT ASL G +RI+L P+DTCKTVLQV+ +GF L+++V G VG LYQGA+A + ++A+G++PWF++FN L++ + A S+ LLR+AGIGL ASV SD N RV+KTTKQ+ + + +Y +++ ADGW GL GRGL TR+LAN +QS+LFTVVWR L +++
Sbjct: 114 IFRSARRRALGGGLPGAAAGVVQVLALMWLRTTINYQCRYGGSFGHALSLLYRDGGVRRFYRGIGFALLQAPLTRFVATASNDGVLALLAGLPQTRDWTPAVTTVFASLTVGAFRILLMPIDTCKTVLQVDSREGFRALVRRVRAGRVGALYQGALATAVSSAIGHYPWFVIFNALSSAEWLEALVSSGLLRNAGIGLVASVVSDTVVNVFRVIKTTKQSIGSRH-DFSYGDTIKVILAADGWKGLFGRGLRTRVLANAVQSVLFTVVWRGLADRW 388
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A7S2CJL7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJL7_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.100e-77 Identity = 142/272 (52.21%), Postives = 190/272 (69.85%), Query Frame = 3
Query: 807 ILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYL 1616
I R+ ++A +GGLPGAAAG +QV LMWLRT +N+Q +YG +M A R LY +GGI R Y+G+SFA+ PL RFG AA NEG +A++++F P + T +AS+ AG+WR+++ PLDTCKT+LQVEGSKGF LLM +V GN+ LY GA A++ T VG+FPWF++FN LN RL +P KL+R+A IG+ AS SD+ TN +RVLK TKQ+ D V+Y +I + G G L RGLSTR+L N +QS++FTVVWR+L
Sbjct: 48 IFRNAGKRAMKGGLPGAAAGAVQVSMLMWLRTTLNFQYKYGYTMREAFRHLYGEGGIGRLYKGISFAIFQQPLVRFGGAAVNEGMMAINESFDITSPFGVALMTSLASVTAGLWRLLIIPLDTCKTMLQVEGSKGFKLLMIRVRNGNIRYLYSGAYASALTTVVGHFPWFVIFNSLNHRLSVPTPPLMKLMRNALIGMIASAASDVSTNWLRVLKATKQSTIVQDG-VSYVQIIRSIIASHGIRGFLFRGLSTRLLGNAVQSIIFTVVWRHL 318
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A7S0UJE9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJE9_9STRA) HSP 1 Score: 265 bits (678), Expect = 3.710e-75 Identity = 139/279 (49.82%), Postives = 187/279 (67.03%), Query Frame = 3
Query: 798 VRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKY 1628
+ I R ++A GGLPGAAAG++QV TLMWLRT +NYQ RYG A LY++GGI RFYRG+ FAL PLSRF A+N+G LAL P + + TT ASL G++RI+L P+DTCKTVLQV+ S+GF LM++V G + LYQGA A + ++ +G++PWF+++N L+A + + KL+R+A IGL ASV SD N RV+KTTKQ + + TY +++ ADGW GL GRGL TR+LAN +QS+LFTV+WR L E++
Sbjct: 112 IGEIFRKAGRKALGGGLPGAAAGVVQVFTLMWLRTTINYQSRYGAGFFRALAILYKEGGIGRFYRGIGFALFQAPLSRFVATASNDGVLALLAGLPYTKHWAPAITTVFASLTVGLFRILLMPVDTCKTVLQVDSSEGFRALMRRVRAGKISALYQGAAATAVSSTIGHYPWFVIYNGLSAAEWLKSLIPKKLVRNASIGLVASVVSDTLVNVFRVIKTTKQTIGV-NHDFTYSDTIRIIVAADGWKGLFGRGLRTRVLANSVQSILFTVIWRGLAERW 389
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A7S2WKN1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKN1_9STRA) HSP 1 Score: 263 bits (672), Expect = 2.420e-74 Identity = 148/301 (49.17%), Postives = 194/301 (64.45%), Query Frame = 3
Query: 807 ILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALAL--SDAFPRPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKYVAPKHSKSQLALEARSGQLGLGGKG 1703
I ++ A +A GG+ GA AG+LQV LMWLRT +N+Q R+G S+ R LYR+GGI RFY+G+SFA+ PL+RFG AANEG L L S L T AS++AG+WR+++ PLDT KT+LQVEG++GF + +V G + LY GA A++ AT VG++PWF +N L L +PA + K+ RSA IGL ASV SDL TN IRV+KTTKQA+ +K+++Y L++ G GLL RGLSTRILANGLQSMLFTV WR L + +G++GLG G
Sbjct: 57 IFKAAASKALSGGVTGACAGVLQVAGLMWLRTTMNFQYRHGGSIPQVMRALYREGGIPRFYQGLSFAIFQGPLARFGATAANEGMLFLVSSAGVSSGPGLALATAAASVVAGLWRLLIIPLDTLKTILQVEGAQGFRAVSDRVRAGQISSLYNGAYASAFATMVGHYPWFSTYNMLEKSLAVPATFAKKVWRSAFIGLTASVVSDLATNWIRVIKTTKQASVV-NKDLSYGETLKLIVGVAGVKGLLFRGLSTRILANGLQSMLFTVFWRLLADNRXXXXXXXXXXXXXXXAGEMGLGRDG 356
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A5A8BYU3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYU3_CAFRO) HSP 1 Score: 256 bits (655), Expect = 1.240e-73 Identity = 142/280 (50.71%), Postives = 186/280 (66.43%), Query Frame = 3
Query: 795 DVRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKY 1628
D++ +L ++A GGLPGAAA +QV++LMWLRT +NYQ R+GT+ A R+LY +GG+ RFYRG++ AL PLSRFG AAN G LAL D + R + + T AS A +WRI L P+DT KT LQVEG++G +L K+ LY GAM A AT VG+FPWF +N+L+A L +P + +AKL R+AGIG AAS SD +NSIRVLKT +Q A + +V+Y AA +I DG GL GRGL TR+LANG+Q LF+V W+Y +Y
Sbjct: 13 DIQQVLAKAGKRALGGGLPGAAAMGVQVLSLMWLRTTMNYQYRHGTTTRQALRKLYAEGGVRRFYRGLAPALFQGPLSRFGDTAANAGMLALLDHYDSTRSLPVAAKTAAASTAAALWRICLMPIDTLKTTLQVEGARGMTILASKMRTSGPVVLYYGAMGAFAATWVGHFPWFFTYNFLDASLSVPDSLAAKLARNAGIGFAASCVSDTSSNSIRVLKTYRQTA---EVKVSYVEAARSIIAKDGLFGLFGRGLQTRLLANGVQGALFSVGWKYFQLQY 289
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: F2USX5_SALR5 (MC family transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USX5_SALR5) HSP 1 Score: 256 bits (653), Expect = 1.500e-73 Identity = 144/279 (51.61%), Postives = 180/279 (64.52%), Query Frame = 3
Query: 798 VRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKY 1628
V+ +L ++A GG GAAA + QV TLMWLRT +NYQ RYGTS AA + LY+QGG+LRFYRG+ AL+ PLSRFG AAN G L L D++ R + + T AS A +WR+VL P+DT KTV+QVEG G L K+ G LY G++AA +AT VG+FPWF FNYLNA + AKL R A IG +SV SD +NSIRV K TKQA + K +TY A VI DG GL RGL TR++ANG+Q M+FTVVW+ L E++
Sbjct: 12 VQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQA---HTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEERF 287
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A6U9X4E8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9X4E8_9STRA) HSP 1 Score: 261 bits (666), Expect = 4.940e-73 Identity = 132/279 (47.31%), Postives = 187/279 (67.03%), Query Frame = 3
Query: 798 VRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWRYLHEKY 1628
V I R ++A GGLPGAAAG++QV TLMWLRT +NYQCRYG S + L+ GGI RFYRG+ FAL P++RF A+N+G LAL P + + TT ASL G +R++L P+DTCKT+LQV+ +GF L+++V G +G LYQGA+A + ++ +G++PWF++FN L++ + ++KLLR+A IGL ASV SD N RV+KTTKQ+ + + +Y +++ ADGW GL GRGL R+ AN +QS++FTV+WR L E++
Sbjct: 144 VGEIFRKAGRKALGGGLPGAAAGVVQVFTLMWLRTAINYQCRYGGSFLSTISILFNDGGIRRFYRGIGFALFQAPIARFVATASNDGVLALLAGLPLTKDWAPAVTTLFASLTVGAFRLLLMPIDTCKTILQVDSREGFRALVRRVRAGKIGALYQGALATAVSSTIGHYPWFVIFNALSSAEWLKNMVTSKLLRNASIGLVASVVSDTVVNVFRVIKTTKQSIGS-KHDFSYSDTIRVIVAADGWKGLFGRGLRARVFANSIQSIMFTVIWRGLAERW 421
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Match: A0A6C0CTP4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTP4_9ZZZZ) HSP 1 Score: 253 bits (647), Expect = 8.870e-73 Identity = 130/278 (46.76%), Postives = 180/278 (64.75%), Query Frame = 3
Query: 783 SGWTDVRHILRSCAQQAGRGGLPGAAAGLLQVVTLMWLRTVVNYQCRYGTSMAAATRELYRQGGILRFYRGVSFALISNPLSRFGMAAANEGALALSDAFP--RPVSLTFTTWIASLLAGIWRIVLTPLDTCKTVLQVEGSKGFALLMKKVWGGNVGCLYQGAMAASTATAVGYFPWFLVFNYLNARLKIPAAASAKLLRSAGIGLAASVTSDLCTNSIRVLKTTKQAAAAYDKEVTYRGAAALVIEADGWGGLLGRGLSTRILANGLQSMLFTVVWR 1610
S + +L+ A GG+PG A + QV TLMWLRT +NYQ RYG + +A + LYR GGI RFYRG S A++ PLSRFG AAN G +L + +P + + + T AS+ A +RI+L P+DT KTV+QVEGSKG A L K+ L+ GAMAAS AT VG++PWF +NYLN R+++P KL+R+A IG +S+ SD C+NS+R++KTT+Q ++ +Y +++E DGW GL GRGL T+I+ NG+Q MLF+V W+
Sbjct: 3 SSTETIDKVLKKAGTDALGGGIPGMIAMVAQVSTLMWLRTTINYQYRYGVTTTSAFKTLYRDGGIPRFYRGYSAAIVQGPLSRFGDTAANTGVFSLLNQYPMTKDMPIFIKTGFASITASGFRILLMPIDTIKTVMQVEGSKGIATLKDKMQTSGSKVLFHGAMAASVATLVGHYPWFATYNYLNHRIQVPNDPKEKLMRNAFIGFVSSIVSDTCSNSVRIVKTTRQT---IHEDTSYTKIIKMILERDGWSGLFGRGLKTKIITNGVQGMLFSVYWK 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1737.4095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1737.4095.1 >prot_H-paniculata_contig1737.4095.1 ID=prot_H-paniculata_contig1737.4095.1|Name=mRNA_H-paniculata_contig1737.4095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=554bp MPSPPSSRRRWLCRSWVAIWFTLTSQSSPVLIQQLPNVWVEVTASSPVLHback to top mRNA from alignment at H-paniculata_contig1737:12924..19406+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1737.4095.1 ID=mRNA_H-paniculata_contig1737.4095.1|Name=mRNA_H-paniculata_contig1737.4095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6483bp|location=Sequence derived from alignment at H-paniculata_contig1737:12924..19406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1737:12924..19406+ >mRNA_H-paniculata_contig1737.4095.1 ID=mRNA_H-paniculata_contig1737.4095.1|Name=mRNA_H-paniculata_contig1737.4095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3324bp|location=Sequence derived from alignment at H-paniculata_contig1737:12924..19406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |