prot_H-paniculata_contig1736.4090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1736.4090.1
Unique Nameprot_H-paniculata_contig1736.4090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1021
Homology
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BLAST of mRNA_H-paniculata_contig1736.4090.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 4.530e-42
Identity = 90/156 (57.69%), Postives = 119/156 (76.28%), Query Frame = 0 
Query:  870 APSAFRS----DPDAVNQGADEFWKDADDEQVYAVLSAPCADAPRIMELALLEGSAGKRLQGGLLNYYRKPSDQSGQKVLTGQVALKDGAREQALPGGAAEADFCIQLSRLLNLDQIQCVQVLHAFFRRSNAEGRSEGTSASKDFDFTSMANLSRV 1021
            AP AF S    DPDAVN G+++FW++ADDEQVY++LSAP AD PR++ELALL+GSAG+R+  GL NYY+KPS +S +KV+ G+VAL +G +E++LPGG AE  FC+ LS+LL+LD++QCVQVLHAF RR N+E       AS+  DF+S   L  V
Sbjct:  491 APLAFTSASAGDPDAVNPGSEDFWRNADDEQVYSLLSAPTADTPRLVELALLQGSAGQRMAQGLANYYKKPSAESLKKVVDGKVALMEGEQERSLPGGEAEGKFCVSLSKLLHLDEVQCVQVLHAFLRRRNSESPRGSPPASEGLDFSSQFLLFEV 646
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1736.4090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGV5_ECTSI4.530e-4257.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1736contigH-paniculata_contig1736:467..6757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1736.4090.1mRNA_H-paniculata_contig1736.4090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1736 467..8535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1736.4090.1 ID=prot_H-paniculata_contig1736.4090.1|Name=mRNA_H-paniculata_contig1736.4090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1021bp
MFGAGGGAGAPAPAPSTTGSAFSFGSSSQPANTGAFSFGAAPAPASAGAP
AGNFGGFGATPAAGTPAAAPATGNFSFGSSAAPALAGASSTAPAAPTGNF
GGGFGGGGFGSTPAPAAGVAAPAPASGFGNGFSFGGGGASGAPTPAAAAG
QSSNAGAPTFGAFGASTAAAPAAATGFGGAFGSTAAAAGAPTPTPAPATT
FGSSVFGSSATPATPATAAAPSASGLFGGGDFGATPASVAAPGPAAGGFS
FGSASGTTAPTAVPAPAGSAGGFGSFGANVPAPSGTAGFAFGGGASAAQT
PAPAASVFGGATAAPAAGAFSFGQSSAGQNAAAPASAAFSFATSTTATAS
AAPAAATSQSTQPTPAQIGASIAAPAPVVRSFAFGAAPAPAPPAFGASTA
TTSTAPAPAAGAFSFGGASTIAAPTPAVGSAPAVGSAPAAGALGFGGLTM
SAAPTPAPTTAAATPAPVAGAFSFGGLAGSVAPTPAPATTAAAPAPAAGS
FSFGGLTTSAAPTPAPATAATAPARATGAFSFGGLATSAAPTPAPSTTAA
APTPAAGAFSFGGLGTNAAPTPAPVTTATAPTPATGAFSFGGATSSVAPA
STAPAPAPGAAAGGLSFDSATPSAAPTPAPAAGASAGASAGAFSFSTSAP
APTAAATPSTAATAAIAQPAPAPANAPAPSAGAFNFGTSAPAPAPSAASA
AAPAPASSRGFSFGGVGASGTSAAPAPAPTDSAAPAPAPVPAAVAPSPAA
PSAASGLSFTAAAAPAVTPIATPTPALAQPAAAAQSTGGFSFGAAASTVT
PLPAPAPAAASGNVSSSLVLSGKSTPAGPAPGTSATQAVATPGASQGLML
GLPSLTSGPAPAPAASLVAAPSAFRSDPDAVNQGADEFWKDADDEQVYAV
LSAPCADAPRIMELALLEGSAGKRLQGGLLNYYRKPSDQSGQKVLTGQVA
LKDGAREQALPGGAAEADFCIQLSRLLNLDQIQCVQVLHAFFRRSNAEGR
SEGTSASKDFDFTSMANLSRV
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