prot_H-paniculata_contig17348.4085.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17348.4085.1
Unique Nameprot_H-paniculata_contig17348.4085.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
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BLAST of mRNA_H-paniculata_contig17348.4085.1 vs. uniprot
Match: A0A6H5L1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V4_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.060e-20
Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 0 
Query:  147 LARAAAFNNRAVLLIAAGRGLEACGLLRACLLMLPGEPRPAFNLVLALWRLGRPRAACVQWMTFRGWV 214
            LARAAAFNNRAVLLIA GRG EAC LLRACLL+LP EPRP FN  LALWRLGR R AC  W+  R W+
Sbjct:  905 LARAAAFNNRAVLLIAFGRGEEACRLLRACLLLLPEEPRPTFNFSLALWRLGRRRDACAHWLEARRWL 972
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17348.4085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1V4_9PHAE1.060e-2075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 55..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17348contigH-paniculata_contig17348:2588..3235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17348.4085.1mRNA_H-paniculata_contig17348.4085.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17348 2588..3235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17348.4085.1 ID=prot_H-paniculata_contig17348.4085.1|Name=mRNA_H-paniculata_contig17348.4085.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
GVTTASTSFNDGPRCASSTAPAARGAPQQHGQKRSRERPMDSVGSAVRST
CPAGRSAGSVGSAARAAAEALQAAGAPAPATRSALAPPSRVRNESTIATA
RHSSTPATTTNNTNTSAVATDRKNSDQSSLLSTSPLSSSSIDRHRRLARA
AAFNNRAVLLIAAGRGLEACGLLRACLLMLPGEPRPAFNLVLALWRLGRP
RAACVQWMTFRGWVCD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf