prot_H-paniculata_contig17340.4082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17340.4082.1
Unique Nameprot_H-paniculata_contig17340.4082.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: D7FLV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV3_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 8.420e-8
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    6 RTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGGG 43
            RTAL+DA+SVAAL +TAEAMV D P +E++ PPMGGGG
Sbjct:    2 RTALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGGG 39          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: A0A6H5KRB3_9PHAE (HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRB3_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 9.220e-8
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGG 42
            +VVRTAL+DAQSVAALLMTAEAMV DLP +E+   PMGGG
Sbjct:  523 KVVRTALVDAQSVAALLMTAEAMVADLPEEEAPASPMGGG 562          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: A0A3P3F368_9HYPH (Molecular chaperone GroEL (Fragment) n=1 Tax=Mesorhizobium tamadayense TaxID=425306 RepID=A0A3P3F368_9HYPH)

HSP 1 Score: 48.9 bits (115), Expect = 6.230e-6
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGGGXM 45
            +VVRTAL DA S+AALL+TAEAM+TD+P+ ++ P P GG G M
Sbjct:   62 KVVRTALQDAGSIAALLITAEAMITDIPAKDTAPSPGGGMGGM 104          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: F0WHV2_9STRA (Mitochondriatargeted chaperonin putative n=2 Tax=Albugo TaxID=65356 RepID=F0WHV2_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 7.400e-6
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGG 42
            +VVRT L+DA SVA+L+MTAEA++ DLP+D +  PPMGGG
Sbjct:  527 KVVRTGLLDASSVASLMMTAEALIADLPADGNDAPPMGGG 566          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: M4BZA5_HYAAE (Uncharacterized protein n=29 Tax=Peronosporaceae TaxID=4777 RepID=M4BZA5_HYAAE)

HSP 1 Score: 49.3 bits (116), Expect = 2.590e-5
Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGG 41
            +VVRT L+DA SVA+L+MTAEA++ DLP++    PPMGG
Sbjct:  528 KVVRTGLVDASSVASLMMTAEALIADLPAENGAAPPMGG 566          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: A0A1F8ETN5_9BACT (Chaperonin GroEL n=1 Tax=Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_22 TaxID=1802669 RepID=A0A1F8ETN5_9BACT)

HSP 1 Score: 48.1 bits (113), Expect = 6.640e-5
Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    2 IQVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGGGXM 45
            ++VV+TALI+A SVA+L++T EA+VTDLP ++    PMGGGG M
Sbjct:  518 LKVVKTALINAVSVASLILTTEAVVTDLPEEKESKMPMGGGGGM 561          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: A0A448XJK0_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A448XJK0_9PLAT)

HSP 1 Score: 48.1 bits (113), Expect = 6.650e-5
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGGG 43
            +VVRTAL+DA  VA+LL TAEA+VTDLP +ES  P M G G
Sbjct:  536 KVVRTALVDAAGVASLLTTAEAVVTDLPKEESTAPGMAGAG 576          
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Match: A0A7S0D0S5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D0S5_9EUKA)

HSP 1 Score: 47.8 bits (112), Expect = 9.100e-5
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    3 QVVRTALIDAQSVAALLMTAEAMVTDLPSD-ESVPPPMGGGG 43
            +VVRTAL+DA SVA+L+MTAE +V ++P + E+  PPMGGGG
Sbjct:  548 KVVRTALLDASSVASLMMTAETVVVEIPDEKEAAAPPMGGGG 589          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17340.4082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FLV3_ECTSI8.420e-871.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRB3_9PHAE9.220e-877.50HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A3P3F368_9HYPH6.230e-662.79Molecular chaperone GroEL (Fragment) n=1 Tax=Mesor... [more]
F0WHV2_9STRA7.400e-665.00Mitochondriatargeted chaperonin putative n=2 Tax=A... [more]
M4BZA5_HYAAE2.590e-561.54Uncharacterized protein n=29 Tax=Peronosporaceae T... [more]
A0A1F8ETN5_9BACT6.640e-559.09Chaperonin GroEL n=1 Tax=Candidatus Yanofskybacter... [more]
A0A448XJK0_9PLAT6.650e-565.85Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
A0A7S0D0S5_9EUKA9.100e-561.90Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 1..36
e-value: 1.5E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR45633FAMILY NOT NAMEDcoord: 2..56
NoneNo IPR availablePANTHERPTHR45633:SF32CHAPERONIN CPN60-LIKE 1, MITOCHONDRIALcoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17340contigH-paniculata_contig17340:1924..2094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17340.4082.1mRNA_H-paniculata_contig17340.4082.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17340 1924..2094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17340.4082.1 ID=prot_H-paniculata_contig17340.4082.1|Name=mRNA_H-paniculata_contig17340.4082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MIQVVRTALIDAQSVAALLMTAEAMVTDLPSDESVPPPMGGGGGMGGMGG
MGGMGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027413GROEL-like_equatorial_sf