prot_H-paniculata_contig17333.4079.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17333.4079.1
Unique Nameprot_H-paniculata_contig17333.4079.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig17333.4079.1 vs. uniprot
Match: D8LQI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI5_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.660e-25
Identity = 44/65 (67.69%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:    4 VVQYPGKFELKIIGTNEDGFVTDIRRAVAACLTKGDDNVVSCTTREKGRYTSISLKVFVDNSAQL 68
            +V+YPG F+LKIIG ++D FV+DIR+AVA CLT G+DNV+ C+TREKG+YTSI+LKV V+NS QL
Sbjct:   37 LVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVRVENSTQL 101
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17333.4079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQI5_ECTSI2.660e-2567.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 5..68
e-value: 5.9E-14
score: 52.4
NoneNo IPR availableGENE3D3.30.70.260coord: 2..68
e-value: 7.0E-9
score: 38.0
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 5..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17333contigH-paniculata_contig17333:3545..3748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17333.4079.1mRNA_H-paniculata_contig17333.4079.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17333 3545..3748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17333.4079.1 ID=prot_H-paniculata_contig17333.4079.1|Name=mRNA_H-paniculata_contig17333.4079.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MPIVVQYPGKFELKIIGTNEDGFVTDIRRAVAACLTKGDDNVVSCTTREK
GRYTSISLKVFVDNSAQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007454UPF0250
IPR027471YbeD-like_sf