mRNA_H-paniculata_contig17331.4077.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI) HSP 1 Score: 208 bits (529), Expect = 6.520e-65 Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRI+VADQK+HILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRM+ERF
Sbjct: 138 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 243
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.280e-59 Identity = 94/106 (88.68%), Postives = 103/106 (97.17%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRLDDLY+DSF+V+DVK L+GDHLSRAIGRIAGQ GKTRHAIENATRTR+VVADQ+IHILGSF+NI+VARDAIC LILGAPPGKVYNQM+NVARRMNERF
Sbjct: 126 QDAVALLRLDDLYIDSFEVKDVKALSGDHLSRAIGRIAGQDGKTRHAIENATRTRVVVADQRIHILGSFANIRVARDAICNLILGAPPGKVYNQMKNVARRMNERF 231
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA) HSP 1 Score: 192 bits (488), Expect = 9.100e-59 Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DLY+DSF+V+DVK L GDHLSRAIGR+AGQ GKTRHAIENATRTR++VAD +IHILGSF+NI+VARDAICALILGAPPGKVYNQMRNVARRMNERF
Sbjct: 133 QDAVALLRLEDLYIDSFEVRDVKMLQGDHLSRAIGRVAGQDGKTRHAIENATRTRVIVADHRIHILGSFANIRVARDAICALILGAPPGKVYNQMRNVARRMNERF 238
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A7S3PRC7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRC7_9STRA) HSP 1 Score: 190 bits (483), Expect = 4.460e-58 Identity = 92/105 (87.62%), Postives = 100/105 (95.24%), Query Frame = 1
Query: 127 DAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
DA+ALLRLDDLYVD+F+++DVKTL GDH+SRAIGRIAGQGGKTR AIENATRTRIV+ADQKIHILGSF NIK+ARDAIC LILGAPPGKVYNQMRNVA RMNERF
Sbjct: 129 DAIALLRLDDLYVDTFEIKDVKTLQGDHMSRAIGRIAGQGGKTRFAIENATRTRIVLADQKIHILGSFQNIKIARDAICKLILGAPPGKVYNQMRNVASRMNERF 233
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A2R5GT26_9STRA (Pre-rRNA-processing protein pno1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT26_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.160e-56 Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DL+VDSF+V+DVK L GDHLSRAIGRIAGQGGKT++AIENATRTRIVVADQ+IHILGSF NIK+ARDAIC LILGAPPGKVYNQMR VA RMNERF
Sbjct: 132 QDAVALLRLEDLFVDSFEVKDVKMLHGDHLSRAIGRIAGQGGKTKYAIENATRTRIVVADQRIHILGSFQNIKIARDAICKLILGAPPGKVYNQMRTVASRMNERF 237
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK) HSP 1 Score: 184 bits (468), Expect = 7.610e-56 Identity = 90/106 (84.91%), Postives = 102/106 (96.23%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DLYVDSF+V+DVK L+GDHLSRAIGR+AGQ GKTR+AIENATRTRIVVADQ+IHILGS++NI+VARDAIC LILGAPPGKVYNQMR VA+RM+ERF
Sbjct: 125 QDAVALLRLEDLYVDSFEVKDVKALSGDHLSRAIGRVAGQDGKTRYAIENATRTRIVVADQRIHILGSYANIRVARDAICNLILGAPPGKVYNQMRAVAKRMSERF 230
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A3M6VD79_9STRA (KH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD79_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.590e-55 Identity = 87/106 (82.08%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSFSNIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct: 131 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFSNIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: A0A1Z5KEX1_FISSO (RNA-binding protein PNO1 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5KEX1_FISSO) HSP 1 Score: 179 bits (455), Expect = 3.600e-55 Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRLDDLYV+SFQV DVK L GDHLSRAIGRIAGQ GKTR AIENATRTRIVVADQ+IH+LGS++N++VAR+AIC LILGAPPGKVYN MRNVA+RM+ER+
Sbjct: 30 QDAVALLRLDDLYVESFQVTDVKLLRGDHLSRAIGRIAGQDGKTRFAIENATRTRIVVADQRIHLLGSYANLRVARNAICDLILGAPPGKVYNNMRNVAKRMSERY 135
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM) HSP 1 Score: 182 bits (462), Expect = 4.830e-55 Identity = 86/106 (81.13%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct: 117 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 222
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Match: G4Z4N5_PHYSP (KH domain-containing protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=G4Z4N5_PHYSP) HSP 1 Score: 182 bits (462), Expect = 7.380e-55 Identity = 86/106 (81.13%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 124 QDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIVVADQKIHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMNERF 441
QDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRIV+ADQKIHILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RMNERF
Sbjct: 131 QDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17331.4077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17331.4077.1 >prot_H-paniculata_contig17331.4077.1 ID=prot_H-paniculata_contig17331.4077.1|Name=mRNA_H-paniculata_contig17331.4077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp MLREQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHback to top mRNA from alignment at H-paniculata_contig17331:3756..5334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17331.4077.1 ID=mRNA_H-paniculata_contig17331.4077.1|Name=mRNA_H-paniculata_contig17331.4077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1579bp|location=Sequence derived from alignment at H-paniculata_contig17331:3756..5334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17331:3756..5334- >mRNA_H-paniculata_contig17331.4077.1 ID=mRNA_H-paniculata_contig17331.4077.1|Name=mRNA_H-paniculata_contig17331.4077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig17331:3756..5334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |