prot_H-paniculata_contig1733.4076.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1733.4076.1
Unique Nameprot_H-paniculata_contig1733.4076.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length499
Homology
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BLAST of mRNA_H-paniculata_contig1733.4076.1 vs. uniprot
Match: D7FZH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH7_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 2.070e-98
Identity = 191/397 (48.11%), Postives = 256/397 (64.48%), Query Frame = 0 
Query:  125 KTGGVLS-AGRVGASG--LRAEDEGREGGPKVEIGVTQGPEERWVRRLDIAARRIWSQYYSTSEMRDTLGPLEVFLAAATAALDAGIS--------PTDLATELQKHMLDSSERLDYHLDGDLPMVMYRLWLRGRAIDVYERDMFHTPRWIELIRETKLQMAARPDLVSSGIGGMGTICYPNGESFEGEVDSLIRCAKGRTAGFSSA------AAAAVDAEVVSSNGEPLCDQ-LSGEAE--EQVLEVSHDVRTVSGLVALVTECMDSGLSDEATIMKRHMRSPDFGHPLLVLATRTGEDDDWPHMPDEDEVDPAHLTAEMALTAEHIALGERGAKEMIHDRRRSHLDVYLICAAYR-----AIQAAAAGVTVTAQPEFGLCDEDAHILNEMLKQAA 496
            K GG  + A  VG +G  +R    G    P  + G T+  E+R +RRLD+A RR+++ YYS +++R+T   L VFL  ATAAL+   S        P  LA+ L+  +L +++RL+YHLDGD PMV+YRLW RGR IDVY+RD+ + PRWIEL+ ETK QM   P +V    G +GTICYP+G+ FEG VDSLIR AK      ++A      A   VDAE+ SS       + L G +   +    V+ DVRTVSGLV+L   C++ G+SDEATI++RH++SPDFGHPLL LA+ +G + D PH+PD+ E++P  L AE  LT EH+ALGERGAKE++HDRRR+ LDVYLICAAYR        AA+ G        + L +ED  IL+EM+++AA
Sbjct:  123 KRGGWFNRAAGVGGAGQAVRCAKLGAASVPS-DFGGTEEAEDRCIRRLDLAVRRVFADYYSCTDVRETTESLGVFLKEATAALELDCSTSRSGSVFPAHLASRLKARLLQTADRLNYHLDGDKPMVLYRLWNRGRPIDVYDRDLLNCPRWIELVAETKRQMDNPPVVVE---GEIGTICYPSGDIFEGHVDSLIRTAKAGEVPLAAASYPPQNARPFVDAELSSSADATASSRGLEGSSSGGDGGGAVTQDVRTVSGLVSLTIACLEEGMSDEATILQRHLQSPDFGHPLLRLASPSGNEPDHPHLPDDPEMNPELLRAEEELTEEHLALGERGAKELMHDRRRAQLDVYLICAAYRRNLPEVDDAASRG-------GWHLNEEDGRILDEMIREAA 508
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1733.4076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZH7_ECTSI2.070e-9848.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..498
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1733contigH-paniculata_contig1733:12100..17820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1733.4076.1mRNA_H-paniculata_contig1733.4076.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1733 9106..18597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1733.4076.1 ID=prot_H-paniculata_contig1733.4076.1|Name=mRNA_H-paniculata_contig1733.4076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=499bp
MKRRRRYHATLLTAGALAIAGGVNHFTATGHRQHHLPAAPLTTTTSRSLS
LPPTPFAFVVISPTTTPSATSWRRAQDKACSQHPKRSTFAHGSARPGHTP
DHPSSVQRRHRLHWAPTPGKPRARKTGGVLSAGRVGASGLRAEDEGREGG
PKVEIGVTQGPEERWVRRLDIAARRIWSQYYSTSEMRDTLGPLEVFLAAA
TAALDAGISPTDLATELQKHMLDSSERLDYHLDGDLPMVMYRLWLRGRAI
DVYERDMFHTPRWIELIRETKLQMAARPDLVSSGIGGMGTICYPNGESFE
GEVDSLIRCAKGRTAGFSSAAAAAVDAEVVSSNGEPLCDQLSGEAEEQVL
EVSHDVRTVSGLVALVTECMDSGLSDEATIMKRHMRSPDFGHPLLVLATR
TGEDDDWPHMPDEDEVDPAHLTAEMALTAEHIALGERGAKEMIHDRRRSH
LDVYLICAAYRAIQAAAAGVTVTAQPEFGLCDEDAHILNEMLKQAALI*
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