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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 728 |
| Cds size | 630 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17322.4072.1 >prot_H-paniculata_contig17322.4072.1 ID=prot_H-paniculata_contig17322.4072.1|Name=mRNA_H-paniculata_contig17322.4072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
MSVSTPSRSATGEGGNDAANSLQSRGGIEQSRDSSESSKSEFEQQENICA
TITPSARNANRPDSSSNTPFRGYGFPGNRINLRQSPRFQNPIGVRSVDVP
RRSSNPAVFEDRKTFPDVTTADDVPRSVDAGGTVLRGDGAIWLLEKIPES
VWMPNMVVRQHRWKANLYWLVLLIGYLVYIFTVGCVVKMGDPFGPLTTSD
VVLRRSLSL* back to topmRNA from alignment at H-paniculata_contig17322:2193..4976+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17322.4072.1 ID=mRNA_H-paniculata_contig17322.4072.1|Name=mRNA_H-paniculata_contig17322.4072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2784bp|location=Sequence derived from alignment at H-paniculata_contig17322:2193..4976+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCCATTATTTTCTTGTCAAGTGCTGTGTTCTATAGCTCGAGTGAAGTAT
GAGTGTGTCTACCCCCTCGAGGTCTGCAACAGGCGAGGGGGGCAATGATG
CAGCCAACTCGTTGCAATCGCGCGGGGGTATCGAGCAATCGCGCGATTCC
AGCGAAAGCTCCAAGTCGGAATTTGAGCAGCAGGAGAATATTTGCGCGAC
CATCACGCCGTCAGCCCGCAACGCCAACAGACCTGACAGCAGCAGCAACA
CCCCTTTCCGAGGCTATGGATTCCCTGGGAATCGCATTAATTTGCGGCAG
TCGCCGAGATTCCAGAACCCGATCGGCGTGAGGTCGGTAGATGTTCCGCG
CCGAAGTAGTAATCCCGCCGTTTTCGAAGACAGGAAGACGTTTCCGGACG
TGACAACTGCAGATGATGTACCGCGTTCGGTTGACGCGGGTGGCACAGGT
GAGAGTCCTGGTGTTTGTGTGCGTAGAGGATTCCGCCGGGATGGGCGGGG
AGTCACGAATGTGCAGGTTTTGCTGAAGCTAACTCAAACTTACTCTTGTG
GAGATAGCTTCATATGGATTATTCTAACACATGATCACAAGGTCATGACT
TCACGCCCCCCTGTCAACACGGATTGGATCGTGACTGTATTTTTTTCTCG
GTTTAACTTGCTGCGCGTTATCCCCCTCCTACTTTTATGGGATACATCGA
TAGCATTTCTCTGGTGAACAGTCTGGTCATTTTCATGTTTTCAAGGTGAG
CTGGTTTGTTGCCATGTCGGATCACTCCGAAGGGGAATTTTCATTTTAGG
ACATTACTCAGAGATACTTGTACAGATAGGGATTATTGTAGGGTTCTTGA
TTCATCGATTCGCACCCTTTCGTATTTTCAATAGGCATGGTTGCGTGTTC
TTTGTACAGAGTAACATCGAACATTGTTACAGGTGGTGCCTGTTCTTTCT
CATATCACAAATGCTACTGTTCTTGCTGTGTTGCGCGATGTTGCTGCCTT
GGGTCGCAGGGTCACTGACTGTGTGACCGGCTTGCTCATTTAGGATCTTG
TCAGCATCTCTCTTGCTGTCCTCTTTCAATATCACTATCCCGTGTTGTTT
TGGTTACGCCCGACAATCGCCACACATCACCAGTACCTCATAAGCCTCAA
GCTCAGTATTGCGAACACCAGTGATCACAGTACCTTAAAAGACCCACGGC
TAGGACGGACGGCTATACTTTGGGTTTGCACAATGTACAGTGCAGTACGT
TCTTAGCCTGATCACTCTGATCCGCTCTACGATCTTCTAGAAAGGGAGAA
AAACGTAAACTCCTTTGGGGGGCGTTTCTTGTTTATATGTTTTGCCTGCA
CTGTCAGCTGCGTTTTCTTCCCTAGGCTGTACCCTACGTCTCCACCCGTC
CGAATTCTTGTTCTGATGCATCCCTCAATTCTAAGCAGCATGTTTTCAAC
GAATTTCTCATTGAAGTCGAAAAAAATCATTTTGAGCTTTTGAGGGGAAT
TCTAAATGAGGTCGTTTTTTGTCCGATTTCTTTCGTTTTTCCGTTTTTCG
AAAAATAGAAATTGCAAGAGCGACCTAAACAAGGTGATGACTGTGACCAT
GGTGCACCAAATGTGTGAGGGCAATAAGATGTACAGTGTTACCGAACATT
TTCTCGATTTTGAGCTCGCCATCGCGATTTCCAAGTCTCGGAAAACGGAG
TAATCGGACGATAAACGGTCTCGTTGGGAATGGCCCTTGACTGCCCATTT
CTGAAGTAAGACATGGATTTTTAAATACGAAGAGTCTAGCTGAGGGGATC
CGCCACCATCGCAGCAACGTATTTTTCAACATCATACATACCTCTTACAC
GCCGCTGTGCAAGCGTCTGAAGGACTTCGAGGCCTTGACCACGGGCATGA
GATCATAAACTATGTCCTATTGTGCTCCCGTCTTGAGTATGCTACAGGCC
AAGTTCGGCGTCTGGAAAGGTATCGTTTGGACACACGGAAAATATGCGAT
CATCAGGCCCGCACCGACTCCAAAACCTCTAACCACAACAACGTGTGAAA
AAATTATGCCATAATTTACGTCGGGTTGCGCGAGATCAGAAAGCCCTCAC
AAACTCGGCAGCTGCCCGTCATCTGTAGCTCACCTGTAGTGTCAAACTAC
ATTGCCGAATTGTTCGTGCTTTTTTATGGAATACTTGAGTTCCGTCGTTC
AGACATGCGGGCAGAAGACGAGAGTCTCTTCACGTACAGTAGAATCGCTG
GACACGATGTGTCACACACGTCCTGTCATTCGAGCGGCCCCTGCGTTTTC
TCTGGTGTATTGGCTGTCTCTTCCACGTGCTACTATGTCCCGAAAGGGCA
GCTTGTACACGCTAGACGGTAAATCATGTTTTTAATCGTACGAAATTAAA
ATCGAAACTGAGTATATGTAAATTCGTTTATACCACAGCGTTAAAAAAAG
TAGCTACATACGCTTGCCAGTGAGCACATCTTTTATCCCTTCCCCTGTTT
TCAGTATTACGAGGTGACGGTGCTATTTGGCTGCTAGAAAAGATCCCGGA
GAGCGTTTGGATGCCAAACATGGTTGTGCGGCAGCACCGGTGGAAGGCTA
ATCTATACTGGCTGGTGCTTTTGATAGGGTACTTGGTCTACATTTTCACG
GTAGGCTGCGTCGTGAAAATGGGCGATCCGTTCGGGCCGTTAACGACATC
AGATGTAGTGCTCCGACGATCGTTGAGTCTGTGATCTGTTGCTTCCTTTC
CAGTTGGGACGACGGCAATTGAGGCACCGATAAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig17322:2193..4976+ >mRNA_H-paniculata_contig17322.4072.1 ID=mRNA_H-paniculata_contig17322.4072.1|Name=mRNA_H-paniculata_contig17322.4072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at H-paniculata_contig17322:2193..4976+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGTGTCTACCCCCTCGAGGTCTGCAACAGGCGAGGGGGGCAATGA
TGCAGCCAACTCGTTGCAATCGCGCGGGGGTATCGAGCAATCGCGCGATT
CCAGCGAAAGCTCCAAGTCGGAATTTGAGCAGCAGGAGAATATTTGCGCG
ACCATCACGCCGTCAGCCCGCAACGCCAACAGACCTGACAGCAGCAGCAA
CACCCCTTTCCGAGGCTATGGATTCCCTGGGAATCGCATTAATTTGCGGC
AGTCGCCGAGATTCCAGAACCCGATCGGCGTGAGGTCGGTAGATGTTCCG
CGCCGAAGTAGTAATCCCGCCGTTTTCGAAGACAGGAAGACGTTTCCGGA
CGTGACAACTGCAGATGATGTACCGCGTTCGGTTGACGCGGGTGGCACAG
ATGAGTGTGTCTACCCCCTCGAGGTCTGCAACAGGCGAGGGGGGCAATGA
TGCAGCCAACTCGTTGCAATCGCGCGGGGGTATCGAGCAATCGCGCGATT
CCAGCGAAAGCTCCAAGTCGGAATTTGAGCAGCAGGAGAATATTTGCGCG
ACCATCACGCCGTCAGCCCGCAACGCCAACAGACCTGACAGCAGCAGCAA
CACCCCTTTCCGAGGCTATGGATTCCCTGGGAATCGCATTAATTTGCGGC
AGTCGCCGAGATTCCAGAACCCGATCGGCGTGAGGTCGGTAGATGTTCCG
CGCCGAAGTAGTAATCCCGCCGTTTTCGAAGACAGGAAGACGTTTCCGGA
CGTGACAACTGCAGATGATGTACCGCGTTCGGTTGACGCGGGTGGCACAG
TATTACGAGGTGACGGTGCTATTTGGCTGCTAGAAAAGATCCCGGAGAGC
GTTTGGATGCCAAACATGGTTGTGCGGCAGCACCGGTGGAAGGCTAATCT
ATACTGGCTGGTGCTTTTGATAGGGTACTTGGTCTACATTTTCACGGTAG
GCTGCGTCGTGAAAATGGGCGATCCGTTCGGGCCGTTAACGACATCAGAT
GTAGTGCTCCGACGATCGTTGAGTCTGTGATATTACGAGGTGACGGTGCT
ATTTGGCTGCTAGAAAAGATCCCGGAGAGCGTTTGGATGCCAAACATGGT
TGTGCGGCAGCACCGGTGGAAGGCTAATCTATACTGGCTGGTGCTTTTGA
TAGGGTACTTGGTCTACATTTTCACGGTAGGCTGCGTCGTGAAAATGGGC
GATCCGTTCGGGCCGTTAACGACATCAGATGTAGTGCTCCGACGATCGTT
GAGTCTGTGA back to top
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