prot_H-paniculata_contig17308.4068.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17308.4068.1
Unique Nameprot_H-paniculata_contig17308.4068.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length712
Homology
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A6H5L2L7_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L7_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 9.560e-48
Identity = 188/568 (33.10%), Postives = 235/568 (41.37%), Query Frame = 0
Query:  176 RKPVLDALSTLLAQMEESNVALALTVSRSYHSEGDRSRVRPSSARARYATKNPETGVMTCDSKVSGCASGMGGKTVEPAELDPLYACETPACSKPKTLGSSELCGEALTPTTVVELIRAGGLEEKMGAFAELAGGLGGGTALPGFGGGQQCVSELLSKVLD--ADDV--------------SGKGHVAGYDSGLAADFRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNE-------ETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIRPAIVEGFVSSQPSQVIDSPPKGFGAGGFSC-GPLKATWQGTGSDGR------RALVERVLTVRAGATCQFHEPVTGRTTGDREALSKDTTYHHHSLHMKSRERYSKEGLHEKPFTGMKHDRHNEDVRYDLVGIILHQGQTLDSGHYTFALNATF-DSARFTSATATRDGPAVDSVSCSPTARLKSTADSTQCSDKIVTDASVGADDLQGRLSSGLRTERGAGMDKRPSVGEDHSPGFVLFDDERVRWLSSEETDSVLQ 712
            R PVL AL  +L +ME  N AL     +   + G ++ V P +         PE       S  SG  S    KT +  +  PL         +P       +  E++ PT++VELI  G L       A L GG  G T    FG GQ CVSELL K L    DD               SG  H + +  GLA  FRG LC R +C+ECER     E F EL LPPL+  +       + A    +  G  S     RTIQ L++ +   ESL G NKVWCEACRQWTEAERR S+H  P LL+LH+RP   +    S P     +  +  G    S  G ++      G+DGR         +ER L VR  A CQFH    G                  S                   TG   D  + D+ YDL+G ILHQGQTL SGHYTFA+NA   D A F +          D                                D +  +  G      AG     + G+   P F LFDD  VRWLS EE  +VL+
Sbjct:   55 RNPVLVALEQVLGEMETRNRAL---FQQQLVAAGSQTAVSPPA--------EPE-------STSSGATSSAESKTCQWFDQTPL---------RPSASTGEGVRVESIAPTSLVELIHGGWLSADR---ARLGGGGAGTTGSTDFGTGQACVSELLGKFLGLVVDDXXXXXXXXXXXXXXRSGGTHSSSF-CGLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPQHAPPLTAQRAIPAAENDGGPSLRGRHRTIQTLIDGVFERESLAGNNKVWCEACRQWTEAERRSSVHSPPGLLALHVRPGTRK---RSSPCLYPKALARASGGAPDSVVGDVRR-----GADGRLPAGSREEAIERTLVVRKAARCQFHG---GGVNSXXXXXXXXXXXSVDSC------------------TGQLCD--SGDIFYDLIGAILHQGQTLASGHYTFAINAAAGDWASFLAQQXXXXXXXADR-------------------------------DNRALVQQGPPGATAAGS----TYGK---PDFALFDDATVRWLSLEEERAVLR 522          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: D7FM48_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM48_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.310e-29
Identity = 137/389 (35.22%), Postives = 167/389 (42.93%), Query Frame = 0
Query:   69 PPFVGLKNLGNTCYVNAVVQALHACLRAVAKLREATAG-RDNAPVGREAESSSSPPSAYRVCNVEGQSERLARTDELFAVPSSAYATNEAEESLVAEVSSPENSSRYDRKPVLDALSTLLAQMEESNVALALTVSRSYHSEGDRSRVRPSSARARYATKNPETGVMTCDSKVSGCASGMGGKTVEPAELDPLYACETPACSKPKTLGSSELCGEALTPTTVVELIRAGGLEEKMGAFAELAGGLGGGTALPGFGGGQQCVSELLSKVLD--ADD----VSGKGHVAGYDSG---------LAADFRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAED--------EGDGQGCSSALPELRTIQDLLETILRSESLGGTNKV 433
            PPFVGLKNLG TCYVNAV+QAL AC   +   R    G  D    G E  S S+PP+A                    A P  A A +E    LVA V+  +      R PVL AL  +L +ME  N AL+            +  V   S  A  +   PE       S  SG  S    KT +P +  PL         +P       +  EA+ PT +VELIR G L       + L GG  G T    FG GQ CVSELL K L    DD     +  G V G  SG         LA  FRG LC R +C+ECER     E F EL LPPL+   + A            +  G  S     RT+Q L++ +   ESL G NK+
Sbjct:  135 PPFVGLKNLGETCYVNAVLQALTACHGVLTSSRGGGGGWHDVGSEGSEG-SCSTPPAAD-------------------AAP--AGAASEGTAVLVAGVTGTQ------RNPVLAALEQVLGEMETRNRALS-----------QQQLVAFGSQTAVSSPAEPE-------STGSGATSSPESKTCQPYDQTPL---------RPSASTGEGVLVEAIAPTFLVELIRGGWLSADR---SRLGGGGAGATGSTEFGTGQACVSELLGKFLGLVVDDGGSGATSLGGVGGRRSGGSHSSSFCCLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFEGESLAGNNKL 465          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A8J4XEX1_CLAMG (Ubiquitin carboxyl-terminal hydrolase 1 n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4XEX1_CLAMG)

HSP 1 Score: 69.7 bits (169), Expect = 1.050e-8
Identity = 33/106 (31.13%), Postives = 58/106 (54.72%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE ++   E F+++ +P  VQ EET+  E   +      PE +T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  419 FQGQLVLRTRCLECECYTERREDFQDISVP--VQEEETSYSEASSEISPDPKPEQKTLRWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVVTIHLK 522          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A3B4DKK8_PYGNA (Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4DKK8_PYGNA)

HSP 1 Score: 69.3 bits (168), Expect = 1.890e-8
Identity = 108/470 (22.98%), Postives = 179/470 (38.09%), Query Frame = 0
Query:   59 IPCPQPPLLP-------PPFVGLKNLGNTCYVNAVVQALHAC---------LRAVAKLREATAGRDNAPVGREAES--SSSPPSAYRVCNVEGQSERLARTDELFAVPSSAYATNEAE-------ESLVAEVSSPENSSRYDRKPVLDALSTLLAQ-----------MEESNVALALTVSRSYHSEGDRSRVRPSSARARYATKNPE--------------------------TGVMTCDSKVSGCASGMGGKTVEPAELDPLYACETP--ACSKPKTLGSSELCGEALTPTTVVELIRAGGLEEKMGAFAELAGGL--GGGTALPGFGGGQQCVSELLSKVLDADDVSGKGHVAGYDSGLAADFRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            +P P P  LP        PFVGL NLGNTCY+N+++Q L+ C         L  ++KL++    +++ P   E ES   S+P     + ++      L +    F      Y+  E         ++L       E   ++D + VL  +   + +            +ES      T     +++G  S  R S   A  A K P+                          TG   CD +      G G +  E        +  TP     + K    S L      P+   +    G +   +G  AE           +    G G+   +E  ++ LD    S K    G D  L   F+G L +R  C+ECE ++   E F+++ +P  VQ +ET   +   +      PE +T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:   61 VPVPCPSSLPCGKRESLAPFVGLNNLGNTCYLNSILQVLYYCPGFKDAVKLLYHLSKLKDKQ--KEDGPKNEEGESCDDSTPVHMELLSSLYSLISSLEQLQSSFLFNPEKYSEGELATPPRKVLKTLRQLNPMYEGYLQHDAQEVLQCILAYIQEACDTIKKEQGYQDESTDNFTATQEEEDNADGQLSGKRKSDTEAGNAKKKPKSQSRPKKSETENKPFTRSKRKSSGDVTGNSLCDQRDETQGEGEGKEEKERGNNTEEKSEGTPKEVNKRKKRAKLSWLKSSGKQPSIFSKFRSMGRISSHVGDRAESKEDQVRTSDDSQDSQGKGKAIETEERTENLD-QTASKKEERQGLDV-LKQLFQGQLVLRTRCLECECYTERREDFQDISVP--VQEDETNCSDSSSEISPDPKPEQKTLKWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVVTIHLK 524          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A556TY37_BAGYA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TY37_BAGYA)

HSP 1 Score: 68.9 bits (167), Expect = 2.470e-8
Identity = 33/106 (31.13%), Postives = 58/106 (54.72%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE ++   E F+++ +P  VQ +ET+  E   Q      PE +T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  421 FQGQLVLRTRCLECECYTERREDFQDISVP--VQEDETSCSESSSQVSPDPKPEQKTLRWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPDIVTIHLK 524          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A673INV6_9TELE (Ubiquitin carboxyl-terminal hydrolase n=11 Tax=Cyprininae TaxID=2743694 RepID=A0A673INV6_9TELE)

HSP 1 Score: 68.6 bits (166), Expect = 3.260e-8
Identity = 37/135 (27.41%), Postives = 65/135 (48.15%), Query Frame = 0
Query:  328 SELLSKVLDADDVSGKGHVAGYDSGLAADFRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            SE  S+  +     GK         L   F+G L +R  C+ECE  +   E F+++ +P  VQ +E +  +   +      PEL+T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  390 SENESRTQEVKQSLGKNKEQSGLDVLKWMFQGQLVLRTRCLECECFTERREDFQDISVP--VQEDENSSSDSSSEISPDPKPELKTLKWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVITIHLK 522          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A5A9NUW3_9TELE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NUW3_9TELE)

HSP 1 Score: 68.2 bits (165), Expect = 4.290e-8
Identity = 32/106 (30.19%), Postives = 59/106 (55.66%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE ++   E F+++ +P  VQ +ET+  +   +      PEL+T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  417 FQGQLLLRTRCLECECYTERREDFQDISVP--VQEDETSCSDSSSEISPDPKPELKTLKWAISQFASVERIVGQDKYFCENCHHYTEAERSLLFDKTPEVVTIHLK 520          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A6P6PJL5_CARAU (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Cyprinidae TaxID=7953 RepID=A0A6P6PJL5_CARAU)

HSP 1 Score: 67.8 bits (164), Expect = 5.630e-8
Identity = 31/106 (29.25%), Postives = 57/106 (53.77%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE  +   E F+++ +P + +N+  + D    Q      PEL+T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  415 FQGQLVLRTRCLECECFTERREDFQDISVP-VQENDNISSDSDSSQISPDPKPELKTLKWAISQFASVERIMGEDKYFCETCHHYTEAERSLLFDKTPEVITIHLK 519          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: A0A670JI43_PODMU (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Lacertinae TaxID=162266 RepID=A0A670JI43_PODMU)

HSP 1 Score: 67.8 bits (164), Expect = 5.650e-8
Identity = 32/106 (30.19%), Postives = 60/106 (56.60%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE  +   E F+++ +P  VQ EE ++ E + +       E++T++  +      E + G +K +CE CR +TEAER      +P ++++H++
Sbjct:  432 FQGQLVLRTRCLECESFTERREDFQDISVP--VQKEEFSKTEENSEISPDPKTEVKTLKWAISQFASVERIVGEDKYFCENCRHYTEAERSLLFDKMPEVITIHLK 535          
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Match: UPI001955D4BE (ubiquitin carboxyl-terminal hydrolase 1 n=2 Tax=Cyprinoidei TaxID=30727 RepID=UPI001955D4BE)

HSP 1 Score: 67.8 bits (164), Expect = 5.670e-8
Identity = 31/106 (29.25%), Postives = 58/106 (54.72%), Query Frame = 0
Query:  357 FRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGDGQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSLHHLPRLLSLHIR 462
            F+G L +R  C+ECE  +   E F+++ +P  VQ +ET+  +   +      P+L+T++  +      E + G +K +CE C  +TEAER       P ++++H++
Sbjct:  423 FQGQLVLRTRCLECECFTERREDFQDISVP--VQEDETSSPDSSSEISPDPKPDLKTLKWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVVTIHLK 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17308.4068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2L7_9PHAE9.560e-4833.10USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FM48_ECTSI1.310e-2935.22USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J4XEX1_CLAMG1.050e-831.13Ubiquitin carboxyl-terminal hydrolase 1 n=1 Tax=Cl... [more]
A0A3B4DKK8_PYGNA1.890e-822.98Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Serr... [more]
A0A556TY37_BAGYA2.470e-831.13Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Baga... [more]
A0A673INV6_9TELE3.260e-827.41Ubiquitin carboxyl-terminal hydrolase n=11 Tax=Cyp... [more]
A0A5A9NUW3_9TELE4.290e-830.19Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trip... [more]
A0A6P6PJL5_CARAU5.630e-829.25Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Cypr... [more]
A0A670JI43_PODMU5.650e-830.19Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Lace... [more]
UPI001955D4BE5.670e-829.25ubiquitin carboxyl-terminal hydrolase 1 n=2 Tax=Cy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 326..483
e-value: 3.9E-14
score: 54.6
NoneNo IPR availableGENE3D3.90.70.10coord: 65..231
e-value: 7.0E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 68..708
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 72..606
e-value: 1.2E-11
score: 44.6
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 73..88
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 583..601
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 72..712
score: 17.773
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 69..706

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17308contigH-paniculata_contig17308:1765..4307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17308.4068.1mRNA_H-paniculata_contig17308.4068.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17308 948..4307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17308.4068.1 ID=prot_H-paniculata_contig17308.4068.1|Name=mRNA_H-paniculata_contig17308.4068.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=712bp
MIHGHTRAFPTTRGDNKANAGAGSVPLRSSIYGSGLAQSDAGPSPLLNGG
NTPPKTTTIPCPQPPLLPPPFVGLKNLGNTCYVNAVVQALHACLRAVAKL
REATAGRDNAPVGREAESSSSPPSAYRVCNVEGQSERLARTDELFAVPSS
AYATNEAEESLVAEVSSPENSSRYDRKPVLDALSTLLAQMEESNVALALT
VSRSYHSEGDRSRVRPSSARARYATKNPETGVMTCDSKVSGCASGMGGKT
VEPAELDPLYACETPACSKPKTLGSSELCGEALTPTTVVELIRAGGLEEK
MGAFAELAGGLGGGTALPGFGGGQQCVSELLSKVLDADDVSGKGHVAGYD
SGLAADFRGALCIRMMCMECERHSVNHEPFKELMLPPLVQNEETAEDEGD
GQGCSSALPELRTIQDLLETILRSESLGGTNKVWCEACRQWTEAERRPSL
HHLPRLLSLHIRPAIVEGFVSSQPSQVIDSPPKGFGAGGFSCGPLKATWQ
GTGSDGRRALVERVLTVRAGATCQFHEPVTGRTTGDREALSKDTTYHHHS
LHMKSRERYSKEGLHEKPFTGMKHDRHNEDVRYDLVGIILHQGQTLDSGH
YTFALNATFDSARFTSATATRDGPAVDSVSCSPTARLKSTADSTQCSDKI
VTDASVGADDLQGRLSSGLRTERGAGMDKRPSVGEDHSPGFVLFDDERVR
WLSSEETDSVLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf